# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hg01322a.fasta.nr -Q ../query/KIAA1182.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1182, 210 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7827312 sequences Expectation_n fit: rho(ln(x))= 5.4394+/-0.000181; mu= 7.1435+/- 0.010 mean_var=72.0066+/-13.814, 0's: 45 Z-trim: 49 B-trim: 0 in 0/64 Lambda= 0.151143 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|119608783|gb|EAW88377.1| cofactor of BRCA1, iso ( 278) 1381 309.6 3e-82 gi|119608784|gb|EAW88378.1| cofactor of BRCA1, iso ( 290) 1381 309.6 3.1e-82 gi|52545519|emb|CAB43381.3| hypothetical protein [ ( 398) 1381 309.7 4e-82 gi|10434169|dbj|BAB14157.1| unnamed protein produc ( 475) 1381 309.7 4.6e-82 gi|15080250|gb|AAH11892.1| COBRA1 protein [Homo sa ( 475) 1381 309.7 4.6e-82 gi|38372378|sp|Q8WX92.1|NELFB_HUMAN RecName: Full= ( 580) 1381 309.8 5.4e-82 gi|149039414|gb|EDL93634.1| similar to cofactor of ( 475) 1316 295.5 8.5e-78 gi|149039415|gb|EDL93635.1| similar to cofactor of ( 580) 1316 295.6 1e-77 gi|133777873|gb|AAI14765.1| COBRA1 protein [Bos ta ( 496) 1297 291.4 1.6e-76 gi|194226092|ref|XP_001917565.1| PREDICTED: simila ( 530) 1296 291.2 1.9e-76 gi|194681204|ref|XP_590381.4| PREDICTED: cofactor ( 800) 1297 291.5 2.3e-76 gi|7670478|dbj|BAA95090.1| unnamed protein product ( 475) 1292 290.3 3.2e-76 gi|13435819|gb|AAH04762.1| Cobra1 protein [Mus mus ( 475) 1290 289.9 4.3e-76 gi|38372348|sp|Q8C4Y3.2|NELFB_MOUSE RecName: Full= ( 580) 1290 289.9 5.1e-76 gi|73967428|ref|XP_855920.1| PREDICTED: similar to ( 278) 1280 287.5 1.3e-75 gi|73967426|ref|XP_548351.2| PREDICTED: similar to ( 580) 1280 287.7 2.3e-75 gi|126302653|ref|XP_001366988.1| PREDICTED: simila ( 580) 1183 266.6 5.4e-69 gi|73967430|ref|XP_855961.1| PREDICTED: similar to ( 581) 1149 259.2 9.2e-67 gi|53129399|emb|CAG31384.1| hypothetical protein [ ( 577) 1097 247.8 2.4e-63 gi|56970601|gb|AAH88538.1| Hypothetical LOC496936 ( 576) 949 215.6 1.2e-53 gi|80477195|gb|AAI08579.1| MGC131073 protein [Xeno ( 577) 926 210.5 4e-52 gi|109109652|ref|XP_001087313.1| PREDICTED: simila ( 474) 879 200.2 4.1e-49 gi|109109650|ref|XP_001087434.1| PREDICTED: simila ( 579) 879 200.3 4.8e-49 gi|28279580|gb|AAH45409.1| Cofactor of BRCA1 [Dani ( 583) 845 192.9 8.3e-47 gi|220864584|emb|CAX15287.1| cofactor of BRCA1 [Mu ( 143) 820 187.1 1.1e-45 gi|37606201|emb|CAE49092.1| novel protein similar ( 577) 818 187.0 4.9e-45 gi|73967424|ref|XP_848314.1| PREDICTED: similar to ( 985) 735 169.0 2.1e-39 gi|37362200|gb|AAQ91228.1| cofactor of BRCA2 [Dani ( 594) 710 163.4 6.1e-38 gi|47213281|emb|CAF92133.1| unnamed protein produc ( 850) 576 134.3 5.1e-29 gi|47205967|emb|CAF91735.1| unnamed protein produc ( 801) 571 133.2 1e-28 gi|210087090|gb|EEA35481.1| hypothetical protein B ( 585) 562 131.2 3.1e-28 gi|193627464|ref|XP_001951169.1| PREDICTED: simila ( 590) 520 122.0 1.8e-25 gi|212507704|gb|EEB11566.1| conserved hypothetical ( 574) 505 118.7 1.7e-24 gi|115751648|ref|XP_781074.2| PREDICTED: hypotheti ( 640) 490 115.5 1.8e-23 gi|157013201|gb|EAA00225.3| AGAP012109-PA [Anophel ( 566) 482 113.7 5.4e-23 gi|108868768|gb|EAT32993.1| conserved hypothetical ( 588) 475 112.2 1.6e-22 gi|167873859|gb|EDS37242.1| negative elongation fa ( 590) 459 108.7 1.8e-21 gi|91078954|ref|XP_974170.1| PREDICTED: similar to ( 587) 455 107.8 3.3e-21 gi|190650208|gb|EDV47486.1| GG17612 [Drosophila er ( 592) 451 107.0 6.1e-21 gi|193901063|gb|EDV99929.1| GH12128 [Drosophila gr ( 598) 450 106.8 7.2e-21 gi|194167127|gb|EDW82028.1| GK25347 [Drosophila wi ( 426) 447 106.0 8.6e-21 gi|194188770|gb|EDX02354.1| GE17513 [Drosophila ya ( 595) 445 105.7 1.5e-20 gi|38372398|sp|Q9Y113.1|NELFB_DROME RecName: Full= ( 594) 443 105.2 2.1e-20 gi|194127345|gb|EDW49388.1| GM17461 [Drosophila se ( 592) 441 104.8 2.8e-20 gi|190618628|gb|EDV34152.1| GF21119 [Drosophila an ( 591) 435 103.5 6.9e-20 gi|193893907|gb|EDV92773.1| GH18941 [Drosophila gr ( 592) 435 103.5 6.9e-20 gi|194151975|gb|EDW67409.1| GJ24126 [Drosophila vi ( 592) 425 101.3 3.1e-19 gi|54643467|gb|EAL32211.1| GA17103 [Drosophila pse ( 590) 423 100.9 4.2e-19 gi|194104746|gb|EDW26789.1| GL14601 [Drosophila pe ( 590) 423 100.9 4.2e-19 gi|193907051|gb|EDW05918.1| GI16340 [Drosophila mo ( 587) 422 100.6 4.9e-19 >>gi|119608783|gb|EAW88377.1| cofactor of BRCA1, isoform (278 aa) initn: 1381 init1: 1381 opt: 1381 Z-score: 1633.0 bits: 309.6 E(): 3e-82 Smith-Waterman score: 1381; 100.000% identity (100.000% similar) in 210 aa overlap (1-210:69-278) 10 20 30 KIAA11 TRFLPMLMSFLVDDYTFNVDQKLPAEEKAP :::::::::::::::::::::::::::::: gi|119 LLRLLALGQGAWDMIDSQVFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAP 40 50 60 70 80 90 40 50 60 70 80 90 KIAA11 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI 100 110 120 130 140 150 100 110 120 130 140 150 KIAA11 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL 160 170 180 190 200 210 160 170 180 190 200 210 KIAA11 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL 220 230 240 250 260 270 >>gi|119608784|gb|EAW88378.1| cofactor of BRCA1, isoform (290 aa) initn: 1381 init1: 1381 opt: 1381 Z-score: 1632.7 bits: 309.6 E(): 3.1e-82 Smith-Waterman score: 1381; 100.000% identity (100.000% similar) in 210 aa overlap (1-210:81-290) 10 20 30 KIAA11 TRFLPMLMSFLVDDYTFNVDQKLPAEEKAP :::::::::::::::::::::::::::::: gi|119 LLRLLALGQGAWDMIDSQVFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAP 60 70 80 90 100 110 40 50 60 70 80 90 KIAA11 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI 120 130 140 150 160 170 100 110 120 130 140 150 KIAA11 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL 180 190 200 210 220 230 160 170 180 190 200 210 KIAA11 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL 240 250 260 270 280 290 >>gi|52545519|emb|CAB43381.3| hypothetical protein [Homo (398 aa) initn: 1381 init1: 1381 opt: 1381 Z-score: 1630.7 bits: 309.7 E(): 4e-82 Smith-Waterman score: 1381; 100.000% identity (100.000% similar) in 210 aa overlap (1-210:189-398) 10 20 30 KIAA11 TRFLPMLMSFLVDDYTFNVDQKLPAEEKAP :::::::::::::::::::::::::::::: gi|525 LLRLLALGQGAWDMIDSQVFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAP 160 170 180 190 200 210 40 50 60 70 80 90 KIAA11 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI 220 230 240 250 260 270 100 110 120 130 140 150 KIAA11 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL 280 290 300 310 320 330 160 170 180 190 200 210 KIAA11 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL 340 350 360 370 380 390 >>gi|10434169|dbj|BAB14157.1| unnamed protein product [H (475 aa) initn: 1381 init1: 1381 opt: 1381 Z-score: 1629.5 bits: 309.7 E(): 4.6e-82 Smith-Waterman score: 1381; 100.000% identity (100.000% similar) in 210 aa overlap (1-210:266-475) 10 20 30 KIAA11 TRFLPMLMSFLVDDYTFNVDQKLPAEEKAP :::::::::::::::::::::::::::::: gi|104 LLRLLALGQGAWDMIDSQVFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAP 240 250 260 270 280 290 40 50 60 70 80 90 KIAA11 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI 300 310 320 330 340 350 100 110 120 130 140 150 KIAA11 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL 360 370 380 390 400 410 160 170 180 190 200 210 KIAA11 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL 420 430 440 450 460 470 >>gi|15080250|gb|AAH11892.1| COBRA1 protein [Homo sapien (475 aa) initn: 1381 init1: 1381 opt: 1381 Z-score: 1629.5 bits: 309.7 E(): 4.6e-82 Smith-Waterman score: 1381; 100.000% identity (100.000% similar) in 210 aa overlap (1-210:266-475) 10 20 30 KIAA11 TRFLPMLMSFLVDDYTFNVDQKLPAEEKAP :::::::::::::::::::::::::::::: gi|150 LLRLLALGQGAWDMIDSQVFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAP 240 250 260 270 280 290 40 50 60 70 80 90 KIAA11 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI 300 310 320 330 340 350 100 110 120 130 140 150 KIAA11 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL 360 370 380 390 400 410 160 170 180 190 200 210 KIAA11 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL 420 430 440 450 460 470 >>gi|38372378|sp|Q8WX92.1|NELFB_HUMAN RecName: Full=Nega (580 aa) initn: 1381 init1: 1381 opt: 1381 Z-score: 1628.2 bits: 309.8 E(): 5.4e-82 Smith-Waterman score: 1381; 100.000% identity (100.000% similar) in 210 aa overlap (1-210:371-580) 10 20 30 KIAA11 TRFLPMLMSFLVDDYTFNVDQKLPAEEKAP :::::::::::::::::::::::::::::: gi|383 LLRLLALGQGAWDMIDSQVFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEKAP 350 360 370 380 390 400 40 50 60 70 80 90 KIAA11 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|383 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI 410 420 430 440 450 460 100 110 120 130 140 150 KIAA11 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|383 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL 470 480 490 500 510 520 160 170 180 190 200 210 KIAA11 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|383 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL 530 540 550 560 570 580 >>gi|149039414|gb|EDL93634.1| similar to cofactor of BRC (475 aa) initn: 1353 init1: 1308 opt: 1316 Z-score: 1552.9 bits: 295.5 E(): 8.5e-78 Smith-Waterman score: 1316; 94.762% identity (98.571% similar) in 210 aa overlap (1-210:266-475) 10 20 30 KIAA11 TRFLPMLMSFLVDDYTFNVDQKLPAEEKAP :.::::::::.::::::::::::::::::: gi|149 LLRLLALGQGAWDLIDSQVFKEPKMEAELITKFLPMLMSFVVDDYTFNVDQKLPAEEKAP 240 250 260 270 280 290 40 50 60 70 80 90 KIAA11 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|149 VTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFSDI 300 310 320 330 340 350 100 110 120 130 140 150 KIAA11 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL :::::::.:::::::::::::::::::::::::::::.:::::.::::.::: ::::::: gi|149 FLHLLTGSLALLADEFALEDFCSSLFDGFFLTASPRKDNVHRHVLRLLLHLHARVAPSKL 360 370 380 390 400 410 160 170 180 190 200 210 KIAA11 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: : gi|149 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPPQAAETPALELPLPSVPAPAAL 420 430 440 450 460 470 >>gi|149039415|gb|EDL93635.1| similar to cofactor of BRC (580 aa) initn: 1353 init1: 1308 opt: 1316 Z-score: 1551.6 bits: 295.6 E(): 1e-77 Smith-Waterman score: 1316; 94.762% identity (98.571% similar) in 210 aa overlap (1-210:371-580) 10 20 30 KIAA11 TRFLPMLMSFLVDDYTFNVDQKLPAEEKAP :.::::::::.::::::::::::::::::: gi|149 LLRLLALGQGAWDLIDSQVFKEPKMEAELITKFLPMLMSFVVDDYTFNVDQKLPAEEKAP 350 360 370 380 390 400 40 50 60 70 80 90 KIAA11 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|149 VTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFSDI 410 420 430 440 450 460 100 110 120 130 140 150 KIAA11 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL :::::::.:::::::::::::::::::::::::::::.:::::.::::.::: ::::::: gi|149 FLHLLTGSLALLADEFALEDFCSSLFDGFFLTASPRKDNVHRHVLRLLLHLHARVAPSKL 470 480 490 500 510 520 160 170 180 190 200 210 KIAA11 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: : gi|149 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPPQAAETPALELPLPSVPAPAAL 530 540 550 560 570 580 >>gi|133777873|gb|AAI14765.1| COBRA1 protein [Bos taurus (496 aa) initn: 1342 init1: 1297 opt: 1297 Z-score: 1530.3 bits: 291.4 E(): 1.6e-76 Smith-Waterman score: 1297; 93.810% identity (98.571% similar) in 210 aa overlap (1-210:287-496) 10 20 30 KIAA11 TRFLPMLMSFLVDDYTFNVDQKLPAEEKAP ::::::::::.:::.::::::::::::::: gi|133 LLRLLALGQGAWDMIDSQVFKEPKMEVELVTRFLPMLMSFVVDDHTFNVDQKLPAEEKAP 260 270 280 290 300 310 40 50 60 70 80 90 KIAA11 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 VTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI 320 330 340 350 360 370 100 110 120 130 140 150 KIAA11 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL :::::::.:::::::::::::::::::::.::::::::.:.::.::::.::: ::::::: gi|133 FLHLLTGSLALLADEFALEDFCSSLFDGFLLTASPRKESVQRHVLRLLLHLHHRVAPSKL 380 390 400 410 420 430 160 170 180 190 200 210 KIAA11 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL ::::::::::::::::::::::::::::::::::::::::: ::::::::::.::::: : gi|133 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAPETPALELPLPAVPAPAVL 440 450 460 470 480 490 >>gi|194226092|ref|XP_001917565.1| PREDICTED: similar to (530 aa) initn: 1341 init1: 1296 opt: 1296 Z-score: 1528.7 bits: 291.2 E(): 1.9e-76 Smith-Waterman score: 1296; 93.333% identity (98.571% similar) in 210 aa overlap (1-210:321-530) 10 20 30 KIAA11 TRFLPMLMSFLVDDYTFNVDQKLPAEEKAP ::::: ::::.:::.::::::::::::::: gi|194 LLRLLALGQGAWDMIDSQVFKEPKMEVELITRFLPTLMSFVVDDHTFNVDQKLPAEEKAP 300 310 320 330 340 350 40 50 60 70 80 90 KIAA11 VSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VTYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDI 360 370 380 390 400 410 100 110 120 130 140 150 KIAA11 FLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKL :::::::::::::::::::::::::::::.::::::::::.::.::::.::: ::::::: gi|194 FLHLLTGNLALLADEFALEDFCSSLFDGFLLTASPRKENVQRHVLRLLVHLHHRVAPSKL 420 430 440 450 460 470 160 170 180 190 200 210 KIAA11 EALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAPL .::::::::::::::::::::::::::::::::.::::::.:::::::::::.::::: : gi|194 QALQKALEPTGQSGEAVKELYSQLGEKLEQLDHQKPSPAQTAETPALELPLPTVPAPAGL 480 490 500 510 520 530 210 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 01:03:00 2009 done: Wed Mar 4 01:09:13 2009 Total Scan time: 1283.020 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]