# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hf00665as1.fasta.nr -Q ../query/KIAA1180.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
KIAA1180, 360 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7825943 sequences
Expectation_n fit: rho(ln(x))= 5.3083+/-0.00018; mu= 9.9542+/- 0.010
mean_var=70.9393+/-14.153, 0's: 50 Z-trim: 60 B-trim: 2694 in 1/66
Lambda= 0.152276
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|20141614|sp|Q9ULP0.2|NDRG4_HUMAN RecName: Full= ( 352) 2377 531.0 1.5e-148
gi|77416549|sp|Q8BTG7.1|NDRG4_MOUSE RecName: Full= ( 352) 2336 521.9 7.5e-146
gi|149032383|gb|EDL87274.1| N-myc downstream regul ( 352) 2322 518.9 6.3e-145
gi|8927964|sp|Q9Z2L9.1|NDRG4_RAT RecName: Full=Pro ( 352) 2318 518.0 1.2e-144
gi|37788067|gb|AAO65544.1| brain and heart protein ( 384) 2253 503.7 2.5e-140
gi|37788071|gb|AAO65546.1| brain and heart protein ( 404) 2253 503.8 2.6e-140
gi|149640746|ref|XP_001507602.1| PREDICTED: simila ( 397) 2249 502.9 4.7e-140
gi|94574493|gb|AAI16616.1| N-myc downstream regula ( 352) 2147 480.4 2.4e-133
gi|94733017|emb|CAK04294.1| novel protein similar ( 352) 2142 479.3 5.1e-133
gi|82183470|sp|Q6DIX1.1|NDRG4_XENTR RecName: Full= ( 405) 2108 471.9 1e-130
gi|15811121|gb|AAL08806.1|AF308608_1 development-r ( 339) 1999 447.9 1.4e-123
gi|12083723|dbj|BAB20068.1| NDRG4-B [Homo sapiens] ( 339) 1990 445.9 5.5e-123
gi|193785213|dbj|BAG54366.1| unnamed protein produ ( 297) 1971 441.7 9e-122
gi|13879256|gb|AAH06595.1| N-myc downstream regula ( 339) 1966 440.7 2.1e-121
gi|31249541|gb|AAP46192.1| NDRG4-A2 [Rattus norveg ( 339) 1948 436.7 3.3e-120
gi|126305128|ref|XP_001363115.1| PREDICTED: simila ( 339) 1940 434.9 1.1e-119
gi|194383044|dbj|BAG59078.1| unnamed protein produ ( 357) 1925 431.7 1.1e-118
gi|12083727|dbj|BAB20070.1| NDRG4-H [Homo sapiens] ( 371) 1925 431.7 1.2e-118
gi|34533106|dbj|BAC86600.1| unnamed protein produc ( 391) 1925 431.7 1.2e-118
gi|194389632|dbj|BAG61777.1| unnamed protein produ ( 369) 1917 429.9 4e-118
gi|114662816|ref|XP_511222.2| PREDICTED: hypotheti ( 421) 1917 429.9 4.4e-118
gi|73950323|ref|XP_853829.1| PREDICTED: similar to ( 504) 1913 429.1 9.4e-118
gi|194208663|ref|XP_001915487.1| PREDICTED: NDRG f ( 371) 1906 427.5 2.1e-117
gi|109128764|ref|XP_001101825.1| PREDICTED: simila ( 391) 1897 425.5 8.8e-117
gi|37788069|gb|AAO65545.1| brain and heart protein ( 371) 1883 422.4 7.1e-116
gi|37788073|gb|AAO65547.1| brain and heart protein ( 391) 1883 422.5 7.4e-116
gi|118096088|ref|XP_001231665.1| PREDICTED: hypoth ( 515) 1861 417.7 2.6e-114
gi|110276959|gb|ABG57116.1| Ndrg4 [Danio rerio] ( 339) 1799 404.0 2.4e-110
gi|82183576|sp|Q6DJD3|NDR4B_XENLA Protein NDRG4-B ( 367) 1793 402.7 6.3e-110
gi|82180922|sp|Q640Z1.1|NDR4A_XENLA RecName: Full= ( 390) 1771 397.9 1.9e-108
gi|54038689|gb|AAH84357.1| MGC84035 protein [Xenop ( 391) 1771 397.9 1.9e-108
gi|111304967|gb|AAI20118.1| NDRG family member 4 [ ( 340) 1749 393.0 4.8e-107
gi|148679231|gb|EDL11178.1| N-myc downstream regul ( 311) 1709 384.2 2e-104
gi|47076986|dbj|BAD18428.1| unnamed protein produc ( 357) 1677 377.2 2.9e-102
gi|197129931|gb|ACH46429.1| putative N-myc downstr ( 251) 1646 370.3 2.4e-100
gi|197129396|gb|ACH45894.1| putative N-myc downstr ( 251) 1641 369.2 5.2e-100
gi|149032386|gb|EDL87277.1| N-myc downstream regul ( 248) 1632 367.2 2e-99
gi|148679233|gb|EDL11180.1| N-myc downstream regul ( 386) 1590 358.1 1.7e-96
gi|221045566|dbj|BAH14460.1| unnamed protein produ ( 284) 1584 356.7 3.4e-96
gi|149032382|gb|EDL87273.1| N-myc downstream regul ( 363) 1571 353.9 3e-95
gi|90084996|dbj|BAE91239.1| unnamed protein produc ( 228) 1502 338.6 7.5e-91
gi|148674269|gb|EDL06216.1| N-myc downstream regul ( 366) 1494 337.0 3.7e-90
gi|17391187|gb|AAH18504.1| Ndrg3 protein [Mus musc ( 388) 1494 337.0 3.9e-90
gi|50758561|ref|XP_417315.1| PREDICTED: similar to ( 387) 1491 336.3 6.2e-90
gi|114681849|ref|XP_001138515.1| PREDICTED: N-myc ( 359) 1490 336.1 6.7e-90
gi|56203225|emb|CAI21401.1| NDRG family member 3 [ ( 388) 1490 336.1 7.2e-90
gi|73991895|ref|XP_534411.2| PREDICTED: similar to ( 379) 1474 332.6 8.1e-89
gi|114621839|ref|XP_001140027.1| PREDICTED: N-myc ( 377) 1470 331.7 1.5e-88
gi|47209782|emb|CAF93273.1| unnamed protein produc ( 360) 1460 329.5 6.5e-88
gi|13625170|gb|AAK34944.1|AF251054_1 NDR3 [Homo sa ( 363) 1432 323.4 4.7e-86
>>gi|20141614|sp|Q9ULP0.2|NDRG4_HUMAN RecName: Full=Prot (352 aa)
initn: 2377 init1: 2377 opt: 2377 Z-score: 2823.4 bits: 531.0 E(): 1.5e-148
Smith-Waterman score: 2377; 100.000% identity (100.000% similar) in 352 aa overlap (9-360:1-352)
10 20 30 40 50 60
KIAA11 RRVPSLGKMPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFN
::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFN
10 20 30 40 50
70 80 90 100 110 120
KIAA11 FEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 FEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIG
60 70 80 90 100 110
130 140 150 160 170 180
KIAA11 VGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 VGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQ
120 130 140 150 160 170
190 200 210 220 230 240
KIAA11 EELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 EELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLV
180 190 200 210 220 230
250 260 270 280 290 300
KIAA11 VGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 VGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAYL
240 250 260 270 280 290
310 320 330 340 350 360
KIAA11 KDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQVNHTMEVSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 KDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQVNHTMEVSC
300 310 320 330 340 350
>>gi|77416549|sp|Q8BTG7.1|NDRG4_MOUSE RecName: Full=Prot (352 aa)
initn: 2336 init1: 2336 opt: 2336 Z-score: 2774.7 bits: 521.9 E(): 7.5e-146
Smith-Waterman score: 2336; 97.727% identity (99.716% similar) in 352 aa overlap (9-360:1-352)
10 20 30 40 50 60
KIAA11 RRVPSLGKMPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFN
::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|774 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFN
10 20 30 40 50
70 80 90 100 110 120
KIAA11 FEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|774 FEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIG
60 70 80 90 100 110
130 140 150 160 170 180
KIAA11 VGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQ
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
gi|774 VGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQ
120 130 140 150 160 170
190 200 210 220 230 240
KIAA11 EELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLV
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
gi|774 EELVNNTELVQSYRQQISNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLV
180 190 200 210 220 230
250 260 270 280 290 300
KIAA11 VGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAYL
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::.:
gi|774 VGDNAPAEEGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAHL
240 250 260 270 280 290
310 320 330 340 350 360
KIAA11 KDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQVNHTMEVSC
:::::::::::::::::::::::::::::::::::::: :.::.::::.:::::::::::
gi|774 KDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQPCAHSDSSEGMGQVNHTMEVSC
300 310 320 330 340 350
>>gi|149032383|gb|EDL87274.1| N-myc downstream regulated (352 aa)
initn: 2322 init1: 2322 opt: 2322 Z-score: 2758.1 bits: 518.9 E(): 6.3e-145
Smith-Waterman score: 2322; 97.159% identity (99.716% similar) in 352 aa overlap (9-360:1-352)
10 20 30 40 50 60
KIAA11 RRVPSLGKMPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFN
:::::::::::::::::::::::::::::::::::::::::::::::::.::
gi|149 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTLFN
10 20 30 40 50
70 80 90 100 110 120
KIAA11 FEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIG
.::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::
gi|149 LEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLATMLPSVVQHFGFKYVIGIG
60 70 80 90 100 110
130 140 150 160 170 180
KIAA11 VGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQ
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
gi|149 VGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQ
120 130 140 150 160 170
190 200 210 220 230 240
KIAA11 EELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLV
:::::::::::::::::..:::::::::::::::::::::::::::::::::::::::::
gi|149 EELVNNTELVQSYRQQISSVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLV
180 190 200 210 220 230
250 260 270 280 290 300
KIAA11 VGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
gi|149 VGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAHL
240 250 260 270 280 290
310 320 330 340 350 360
KIAA11 KDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQVNHTMEVSC
:::::::::::::::::::::::::::::::::::::: ::::.::::.:::::::::::
gi|149 KDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQPCTHSDSSEGMGQVNHTMEVSC
300 310 320 330 340 350
>>gi|8927964|sp|Q9Z2L9.1|NDRG4_RAT RecName: Full=Protein (352 aa)
initn: 2318 init1: 2318 opt: 2318 Z-score: 2753.4 bits: 518.0 E(): 1.2e-144
Smith-Waterman score: 2318; 96.875% identity (99.716% similar) in 352 aa overlap (9-360:1-352)
10 20 30 40 50 60
KIAA11 RRVPSLGKMPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFN
:::::::::::::::::::::::::::::::::::::::::::::::::.::
gi|892 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTLFN
10 20 30 40 50
70 80 90 100 110 120
KIAA11 FEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIG
.::::::::::::::::::::::::::::::::::::::::.:::.::::::::::::::
gi|892 LEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLATMLPNVVQHFGFKYVIGIG
60 70 80 90 100 110
130 140 150 160 170 180
KIAA11 VGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQ
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
gi|892 VGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQ
120 130 140 150 160 170
190 200 210 220 230 240
KIAA11 EELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLV
:::::::::::::::::..:::::::::::::::::::::::::::::::::::::::::
gi|892 EELVNNTELVQSYRQQISSVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLV
180 190 200 210 220 230
250 260 270 280 290 300
KIAA11 VGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
gi|892 VGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAHL
240 250 260 270 280 290
310 320 330 340 350 360
KIAA11 KDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQVNHTMEVSC
:::::::::::::::::::::::::::::::::::::: ::::.::::.:::::::::::
gi|892 KDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQPCTHSDSSEGMGQVNHTMEVSC
300 310 320 330 340 350
>>gi|37788067|gb|AAO65544.1| brain and heart protein NDR (384 aa)
initn: 2251 init1: 2251 opt: 2253 Z-score: 2675.6 bits: 503.7 E(): 2.5e-140
Smith-Waterman score: 2253; 96.264% identity (99.138% similar) in 348 aa overlap (13-360:38-384)
10 20 30 40
KIAA11 RRVPSLGKMPECWDGEHDIETPYGLLHVVIRGSPKGNRPAIL
: :::::::::::::::::::::::::::
gi|377 RFPEEKPLLRGQDATELDNPDAFLSVVDTDWK-EHDIETPYGLLHVVIRGSPKGNRPAIL
10 20 30 40 50 60
50 60 70 80 90 100
KIAA11 TYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAA
:::::::::::::::.::.::::::::::::::::::::::::::::::::::::::::.
gi|377 TYHDVGLNHKLCFNTLFNLEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAT
70 80 90 100 110 120
110 120 130 140 150 160
KIAA11 MLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKL
:::.::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
gi|377 MLPNVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWAATKL
130 140 150 160 170 180
170 180 190 200 210 220
KIAA11 SGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDIN
:::::::::::::::::::::::::::::::::::..:::::::::::::::::::::::
gi|377 SGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQISSVVNQANLQLFWNMYNSRRDLDIN
190 200 210 220 230 240
230 240 250 260 270 280
KIAA11 RPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|377 RPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGK
250 260 270 280 290 300
290 300 310 320 330 340
KIAA11 LTEAFKYFLQGMGYIAYLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTH
::::::::::::::::.::::::::::::::::::::::::::::::::::::::: :::
gi|377 LTEAFKYFLQGMGYIAHLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQPCTH
310 320 330 340 350 360
350 360
KIAA11 SESSEGLGQVNHTMEVSC
:.::::.:::::::::::
gi|377 SDSSEGMGQVNHTMEVSC
370 380
>>gi|37788071|gb|AAO65546.1| brain and heart protein NDR (404 aa)
initn: 2251 init1: 2251 opt: 2253 Z-score: 2675.3 bits: 503.8 E(): 2.6e-140
Smith-Waterman score: 2253; 96.264% identity (99.138% similar) in 348 aa overlap (13-360:58-404)
10 20 30 40
KIAA11 RRVPSLGKMPECWDGEHDIETPYGLLHVVIRGSPKGNRPAIL
: :::::::::::::::::::::::::::
gi|377 RFPEEKPLLRGQDATELDNPDAFLSVVDTDWK-EHDIETPYGLLHVVIRGSPKGNRPAIL
30 40 50 60 70 80
50 60 70 80 90 100
KIAA11 TYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAA
:::::::::::::::.::.::::::::::::::::::::::::::::::::::::::::.
gi|377 TYHDVGLNHKLCFNTLFNLEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAT
90 100 110 120 130 140
110 120 130 140 150 160
KIAA11 MLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKL
:::.::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
gi|377 MLPNVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWAATKL
150 160 170 180 190 200
170 180 190 200 210 220
KIAA11 SGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDIN
:::::::::::::::::::::::::::::::::::..:::::::::::::::::::::::
gi|377 SGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQISSVVNQANLQLFWNMYNSRRDLDIN
210 220 230 240 250 260
230 240 250 260 270 280
KIAA11 RPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|377 RPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGK
270 280 290 300 310 320
290 300 310 320 330 340
KIAA11 LTEAFKYFLQGMGYIAYLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTH
::::::::::::::::.::::::::::::::::::::::::::::::::::::::: :::
gi|377 LTEAFKYFLQGMGYIAHLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQPCTH
330 340 350 360 370 380
350 360
KIAA11 SESSEGLGQVNHTMEVSC
:.::::.:::::::::::
gi|377 SDSSEGMGQVNHTMEVSC
390 400
>>gi|149640746|ref|XP_001507602.1| PREDICTED: similar to (397 aa)
initn: 2249 init1: 2249 opt: 2249 Z-score: 2670.7 bits: 502.9 E(): 4.7e-140
Smith-Waterman score: 2249; 96.522% identity (99.710% similar) in 345 aa overlap (16-360:53-397)
10 20 30 40
KIAA11 RRVPSLGKMPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYH
::::::::::::::::::::::::::::::
gi|149 QLGSSPGSFSRCSEAPPSSIFKCSVVSASVEHDIETPYGLLHVVIRGSPKGNRPAILTYH
30 40 50 60 70 80
50 60 70 80 90 100
KIAA11 DVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLP
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
gi|149 DVGLNHKLCFNTFFNLEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLP
90 100 110 120 130 140
110 120 130 140 150 160
KIAA11 SVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGL
::.::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
gi|149 SVIQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWAATKLSGL
150 160 170 180 190 200
170 180 190 200 210 220
KIAA11 TSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPG
:::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::
gi|149 TSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQFNLQLFWNMYNSRRDLDINRPG
210 220 230 240 250 260
230 240 250 260 270 280
KIAA11 TVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTE
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
gi|149 TVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTNTTFLKMADSGGLPQVTQPGKLTE
270 280 290 300 310 320
290 300 310 320 330 340
KIAA11 AFKYFLQGMGYIAYLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSES
::::::::::::::::::::::.:::::::::::::::::::::::..::::.:::::::
gi|149 AFKYFLQGMGYIAYLKDRRLSGSAVPSASMTRLARSRTASLTSASSAEGSRPRACTHSES
330 340 350 360 370 380
350 360
KIAA11 SEGLGQVNHTMEVSC
::..::.::::::::
gi|149 SEAMGQINHTMEVSC
390
>>gi|94574493|gb|AAI16616.1| N-myc downstream regulated (352 aa)
initn: 2147 init1: 2147 opt: 2147 Z-score: 2550.3 bits: 480.4 E(): 2.4e-133
Smith-Waterman score: 2147; 86.932% identity (97.443% similar) in 352 aa overlap (9-360:1-352)
10 20 30 40 50 60
KIAA11 RRVPSLGKMPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFN
::::::::::::::::.:::::::.::::.::::::::::::::::::.::.
gi|945 MPECWDGEHDIETPYGMLHVVIRGAPKGNKPAILTYHDVGLNHKLCFNSFFQ
10 20 30 40 50
70 80 90 100 110 120
KIAA11 FEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIG
::: ::::::::::::::::..:: :.:::::.:.:.:::.:::::::::::: ..:::
gi|945 NEDMLEITKHFVVCHVDAPGQHIGAPQMPQGYQYPTMDQLAGMLPSVVQHFGFKSIVGIG
60 70 80 90 100 110
130 140 150 160 170 180
KIAA11 VGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQ
::::::.:::::::::::::::::.:::::::::::::::::::::::::::::.:::::
gi|945 VGAGAYILAKFALIFPDLVEGLVLLNIDPNGKGWIDWAATKLSGLTSTLPDTVLTHLFSQ
120 130 140 150 160 170
190 200 210 220 230 240
KIAA11 EELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLV
:::..:::.::.:::::.:..:: :::::::::::::::..:: :.: ::::::::::::
gi|945 EELMSNTEVVQNYRQQINNTINQFNLQLFWNMYNSRRDLEMNRSGSVINAKTLRCPVMLV
180 190 200 210 220 230
250 260 270 280 290 300
KIAA11 VGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAYL
::::::::.::::::::::::.:::::::::::.::.::::::::::::::::::::::.
gi|945 VGDNAPAEEGVVECNSKLDPTNTTFLKMADSGGMPQITQPGKLTEAFKYFLQGMGYIAYM
240 250 260 270 280 290
310 320 330 340 350 360
KIAA11 KDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQVNHTMEVSC
::::.::: ::::::::::::::::::::::::::: .:::::.::::.:::.:::::::
gi|945 KDRRMSGGPVPSASMTRLARSRTASLTSASSVDGSRNRACTHSDSSEGVGQVSHTMEVSC
300 310 320 330 340 350
>>gi|94733017|emb|CAK04294.1| novel protein similar to v (352 aa)
initn: 2142 init1: 2142 opt: 2142 Z-score: 2544.4 bits: 479.3 E(): 5.1e-133
Smith-Waterman score: 2142; 86.648% identity (97.443% similar) in 352 aa overlap (9-360:1-352)
10 20 30 40 50 60
KIAA11 RRVPSLGKMPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFN
::::::::::::::::.:::::::.::::.::::::::::::::::::.::.
gi|947 MPECWDGEHDIETPYGMLHVVIRGAPKGNKPAILTYHDVGLNHKLCFNSFFQ
10 20 30 40 50
70 80 90 100 110 120
KIAA11 FEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIG
::: ::::::::::::::::..:: :.:::::.:.:.:::.:::::::::::: ..:::
gi|947 NEDMLEITKHFVVCHVDAPGQHIGAPQMPQGYQYPTMDQLAGMLPSVVQHFGFKSIVGIG
60 70 80 90 100 110
130 140 150 160 170 180
KIAA11 VGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQ
::::::.:::::::::::::::::.:::::::::::::::::::::::::::::.:::::
gi|947 VGAGAYILAKFALIFPDLVEGLVLLNIDPNGKGWIDWAATKLSGLTSTLPDTVLTHLFSQ
120 130 140 150 160 170
190 200 210 220 230 240
KIAA11 EELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLV
:::..:::.::.:::::.:..:: :::::::::::::::..:: :.: ::::::::::::
gi|947 EELMSNTEVVQNYRQQINNTINQFNLQLFWNMYNSRRDLEMNRSGSVINAKTLRCPVMLV
180 190 200 210 220 230
250 260 270 280 290 300
KIAA11 VGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAYL
::::::::.::::::::::::.:::::::::::.::.::::::::::::::::::::::.
gi|947 VGDNAPAEEGVVECNSKLDPTNTTFLKMADSGGMPQITQPGKLTEAFKYFLQGMGYIAYM
240 250 260 270 280 290
310 320 330 340 350 360
KIAA11 KDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQVNHTMEVSC
::::.::: ::::::::::::::::::::.:::::: .:::::.::::.:::.:::::::
gi|947 KDRRMSGGPVPSASMTRLARSRTASLTSAGSVDGSRNRACTHSDSSEGVGQVSHTMEVSC
300 310 320 330 340 350
>>gi|82183470|sp|Q6DIX1.1|NDRG4_XENTR RecName: Full=Prot (405 aa)
initn: 1845 init1: 1821 opt: 2108 Z-score: 2503.1 bits: 471.9 E(): 1e-130
Smith-Waterman score: 2108; 88.571% identity (96.857% similar) in 350 aa overlap (13-360:57-405)
10 20 30 40
KIAA11 RRVPSLGKMPECWDGEHDIETPYGLLHVVIRGSPKGNRPAIL
: :::::::::.:::::::.:::::::::
gi|821 LRFPEEKPLLRGQDTEMESADTFLSAADTDWK-EHDIETPYGMLHVVIRGTPKGNRPAIL
30 40 50 60 70 80
50 60 70 80 90 100
KIAA11 TYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAA
::::::::::::::::::.::::::::::::::::::::::::::::::::.:.::::::
gi|821 TYHDVGLNHKLCFNTFFNYEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQYPTMEQLAA
90 100 110 120 130 140
110 120 130 140 150 160
KIAA11 MLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKL
:::::.:::::. .::::::::::::::::::::.::::.:::::::::::::::::.::
gi|821 MLPSVMQHFGFQSIIGIGVGAGAYVLAKFALIFPELVEGMVLVNIDPNGKGWIDWAASKL
150 160 170 180 190 200
170 180 190 200 210 220
KIAA11 SGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDIN
:::::.::.::::::::::::.:::::::.:::::.. :::.:::::::::::::::...
gi|821 SGLTSSLPETVLSHLFSQEELMNNTELVQNYRQQISSCVNQSNLQLFWNMYNSRRDLEMS
210 220 230 240 250 260
230 240 250 260 270 280
KIAA11 RPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGK
:::::::::::: :::::::::::::: :::::::::::.::::::::::::::::::::
gi|821 RPGTVPNAKTLRAPVMLVVGDNAPAEDCVVECNSKLDPTNTTFLKMADSGGLPQVTQPGK
270 280 290 300 310 320
290 300 310 320 330 340
KIAA11 LTEAFKYFLQGMGYIAYLKDRRLSG--GAVPSASMTRLARSRTASLTSASSVDGSRPQAC
:::::::::::::::: ::::: :. :::::::::::::::::::::::::::.::. :
gi|821 LTEAFKYFLQGMGYIASLKDRRQSASAGAVPSASMTRLARSRTASLTSASSVDGARPRPC
330 340 350 360 370 380
350 360
KIAA11 THSESSEGLGQVNHTMEVSC
:.::::.:.::.::::::::
gi|821 TQSESSDGIGQINHTMEVSC
390 400
360 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (8 proc)
start: Wed Mar 4 00:53:01 2009 done: Wed Mar 4 00:58:01 2009
Total Scan time: 1483.490 Total Display time: 0.100
Function used was FASTA [version 34.26.5 April 26, 2007]