hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19293481/chunk_1/iprscan-20080501-19293481.nocrc
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Query sequence: KIAA1176
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00930 2a30: K-Cl cotransporter                      2224.4          0   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00930   1/1      13  1101 .]     1  1171 []  2224.4        0

Alignments of top-scoring domains:
TIGR00930: domain 1 of 1, from 13 to 1101: score 2224.4, E = 0
                   *->ntvdavPriehyrntegqeerklnrpsleelhdllGFdkvvsllgpl
                      n+++++P+i+++++++g+e++++n++++ee++d++  ++v+sll++l
    KIAA1176    13    NPKESSPFINSTDTEKGKEYDGKNMALFEEEMDTS--PMVSSLLSGL 57   

                   adytnngqeskeheeaEeaeetkekppaeavkfGwvkGVlvpCLlNIwGV
                   a+ytn++q+s eheeaE++e++k+kp  +a+++G+++GV++pCL+NI+GV
    KIAA1176    58 ANYTNLPQGSREHEEAENNEGGKKKP-VQAPRMGTFMGVYLPCLQNIFGV 106  

                   iLFLRLsWIVGqAGIglslviillstvvTtiTglSmSAIATNGvVkGGGa
                   iLFLRL+W+VG AGI++s++++++++++T++T++SmSAIATNGvV++GG+
    KIAA1176   107 ILFLRLTWVVGIAGIMESFCMVFICCSCTMLTAISMSAIATNGVVPAGGS 156  

                   YYLISRSLGPEfGgSIGLiFafANAVAvAMYvvGfaEtvldYivPaaaLl
                   YY+ISRSLGPEfGg++GL+F++++++A+AMY++G++E++l+Y++Pa+a++
    KIAA1176   157 YYMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGTIEILLAYLFPAMAIF 206  

                   revnGtdnglkimvdpiNDiRIiGtvtvvvLlgIsfaGmewenKaqvlfL
                   ++    +++++++++++N++R++Gt++++++++++f+G++++nK++++fL
    KIAA1176   207 KA----EDASGEAAAMLNNMRVYGTCVLTCMATVVFVGVKYVNKFALVFL 252  

                   vivllSilnivvGtiipasdekpakGffglkaeiFsenqfDvCaKt.evd
                   ++v+lSil+i++G+i++a+d +p+++++ l+++++s+++fDvCaK+ +++
    KIAA1176   253 GCVILSILAIYAGVIKSAFD-PPNFPICLLGNRTLSRHGFDVCAKLaWEG 301  

                   NeTVttrLWglFCsSrllnatCDeyfsannvTfvpgirgaeggvikENLW
                   NeTVttrLWglFCsSr+lnatCDeyf++nnvT+++gi+ga++g+ikENLW
    KIAA1176   302 NETVTTRLWGLFCSSRFLNATCDEYFTRNNVTEIQGIPGAASGLIKENLW 351  

                   SaYLeKGeivEkrglpStdvlgd.lve...lYvvaDintsFFslfgIFFP
                   S+YL+KG+ivE+ g+ S++++++++++ +++Yv++D++++F++l+gI+FP
    KIAA1176   352 SSYLTKGVIVERSGMTSVGLADGtPIDmdhPYVFSDMTSYFTLLVGIYFP 401  

                   svTGIlAGANiSGDLkDpqkAIPkGTLLAIltTtvvYlssvvlfGACvvR
                   svTGI+AG+N+SGDL+D+qk+IP+GT+LAI tT++vY+ssvvlfGAC+++
    KIAA1176   402 SVTGIMAGSNRSGDLRDAQKSIPTGTILAIATTSAVYISSVVLFGACIEG 451  

                   dAsGdlnDtlvtggltnctslACklgfdfseCakntCeYGLmnnlqvmsl
                   ++++d+++++v+                              +nl+v++l
    KIAA1176   452 VVLRDKFGEAVN------------------------------GNLVVGTL 471  

                   vspfpplIvaGiFsATLssALaSLvsAPrllQALckDnIyPlLqfFgkGy
                   ++p+p++Iv+G+F++T++++L+SL++APrllQA+++D I+P+Lq+Fg+G+
    KIAA1176   472 AWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAISRDGIVPFLQVFGHGK 521  

                   GkngEPlrayLLTffIallfiLIAeLntIAPIiSnFFLasYaliNfScFh
                   ++ gEP++a+LLT++I++++iLIA+L+ +API+S+FFL++Y+++N++c++
    KIAA1176   522 AN-GEPTWALLLTACICEIGILIASLDEVAPILSMFFLMCYMFVNLACAV 570  

                   asLlrsPgWRPrFrYYnwwlSLlGaiLCvaiMFlisWwaALvaivIallL
                   ++Llr+P+WRPrFrYY+w+lS+lG++LC+a+MF++sW++ALva++Ia+l+
    KIAA1176   571 QTLLRTPNWRPRFRYYHWTLSFLGMSLCLALMFICSWYYALVAMLIAGLI 620  

                   YkYVeYKkpdvnWGsstqalsyslALssllrLeevedHvKNwRPQcLVLt
                   YkY+eY++++++WG+++++ls+s+A+++llrLee+++H+KNwRPQ+LVL+
    KIAA1176   621 YKYIEYRGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLV 670  

                   gppGkLednvvcrPaLldlasqlkkkgkGLmIvGsVlqGprkervkEasa
                   +++   +d++v++P+Ll+l+sqlk +gkGL+IvGsVl+G+++e++++a++
    KIAA1176   671 RVD---QDQNVVHPQLLSLTSQLK-AGKGLTIVGSVLEGTFLENHPQAQR 716  

                   aeekiqtwLekrKvkaFyavVvAedlreGvrhLiQasGLGrmkPNtlVmG
                   aee+i++++e++Kvk+F++vV++++lr+Gv+hLiQ+ GLG++++Nt+++G
    KIAA1176   717 AEESIRRLMEAEKVKGFCQVVISSNLRDGVSHLIQSGGLGGLQHNTVLVG 766  

                   ykkdWrqaedpraletYigilhdafdahlaVvvvrvsegldisavlqaqe
                   ++++Wrq+ed+++++++i++++++++ hla++v++++++++ +       
    KIAA1176   767 WPRNWRQKEDHQTWRNFIELVRETTAGHLALLVTKNVSMFPGN------- 809  

                   elsssqekrvrlkdvivdadssedsiqpkfkksseltitkkekekdkkes
                                                                     
    KIAA1176     - -------------------------------------------------- -    

                   kqldmhkeikyptaslneldqkllqassqfqkkQgkGtIDVWWLvdDGGL
                                                + +++++G+IDVWW+v+DGG+
    KIAA1176   810 -----------------------------P-ERFSEGSIDVWWIVHDGGM 829  

                   tLLLPYLLttkkkWkkCKiRiFvgaqkddrseqekkdlatLLykfRidfe
                   ++LLP+LL+++k+W+kCK+RiF++aq+dd+s+q+kkdl+t+Ly++Ri++e
    KIAA1176   830 LMLLPFLLRHHKVWRKCKMRIFTVAQMDDNSIQMKKDLTTFLYHLRITAE 879  

                   vivVlmkssDInaktypqkesveaFeemierfrleknekdreaqlvsdp.
                   v+vV+m++sDI+a+ty++++++e++++++++++l+kne++re+q+++d++
    KIAA1176   880 VEVVEMHESDISAYTYEKTLVMEQRSQILKQMHLTKNEREREIQSITDEs 929  

                   ..........nsaLRL.................................e
                   +++ +++++ n++LRL+ ++++ ++++++++++ +  ++++ ++ +++++
    KIAA1176   930 rgsirrknpaNTRLRLnvpeetagdseekpeeevqlihdqsapscpsssP 979  

                   SlgsdeedEsetd.eKvklkrekPwkitdeekgd.skssegfkdllsmkP
                   S+g+++e+E+etd+eKv+l+++k++++++++kg++++sseg+kd++smkP
    KIAA1176   980 SPGEEPEGEGETDpEKVHLTWTKDKSVAEKNKGPsPVSSEGIKDFFSMKP 1029 

                   d....lqsnrrksyrqvRLNEvlleySrdAaLvvlsLPvprkgsipdelY
                   + ++ +qsn+r+++++vRLNEv++++SrdA+Lv+l++P+ ++++++de+Y
    KIAA1176  1030 EwenlNQSNVRRMHTAVRLNEVIVKKSRDAKLVLLNMPGLPRNRNGDENY 1079 

                   MawLEvLsedLPpvLLVRGnhrnVlTfYS<-*
                   M++LEvL+e L++v+LVRG++r          
    KIAA1176  1080 MEFLEVLTEHLDRVMLVRGGGR-------    1101 

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