# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hk01631.fasta.nr -Q ../query/KIAA1165.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
KIAA1165, 284 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7824907 sequences
Expectation_n fit: rho(ln(x))= 5.6050+/-0.000193; mu= 8.5462+/- 0.011
mean_var=98.9954+/-19.397, 0's: 33 Z-trim: 36 B-trim: 193 in 1/65
Lambda= 0.128904
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|31455493|dbj|BAC77372.1| putative NFkB activati ( 336) 1942 370.9 1.7e-100
gi|73921209|sp|Q9NV92.2|NFIP2_HUMAN RecName: Full= ( 336) 1937 369.9 3.2e-100
gi|55733619|emb|CAH93486.1| hypothetical protein [ ( 308) 1915 365.8 5.2e-99
gi|114650197|ref|XP_522688.2| PREDICTED: similar t ( 502) 1915 366.0 7.4e-99
gi|109121025|ref|XP_001092556.1| PREDICTED: Nedd4 ( 336) 1875 358.4 9.5e-97
gi|194221971|ref|XP_001916257.1| PREDICTED: simila ( 335) 1761 337.2 2.3e-90
gi|73989388|ref|XP_534156.2| PREDICTED: similar to ( 321) 1724 330.3 2.6e-88
gi|194040754|ref|XP_001926612.1| PREDICTED: simila ( 336) 1719 329.4 5.2e-88
gi|75948176|gb|AAI05184.1| NDFIP2 protein [Bos tau ( 302) 1707 327.1 2.2e-87
gi|76631750|ref|XP_589802.2| PREDICTED: Nedd4 fami ( 336) 1707 327.2 2.4e-87
gi|19913452|gb|AAH26126.1| NDFIP2 protein [Homo sa ( 242) 1647 315.9 4.4e-84
gi|7023163|dbj|BAA91863.1| unnamed protein product ( 242) 1642 315.0 8.3e-84
gi|55730833|emb|CAH92135.1| hypothetical protein [ ( 242) 1631 312.9 3.4e-83
gi|77415520|gb|AAI06126.1| Ndfip2 protein [Mus mus ( 313) 1591 305.6 7.2e-81
gi|73921210|sp|Q91ZP6.2|NFIP2_MOUSE RecName: Full= ( 311) 1590 305.4 8.1e-81
gi|149050156|gb|EDM02480.1| Nedd4 family interacti ( 242) 1470 283.0 3.5e-74
gi|47937415|gb|AAH71237.1| Nedd4 family interactin ( 241) 1458 280.7 1.7e-73
gi|15705909|gb|AAL05872.1|AF411608_1 Nedd4 WW doma ( 241) 1457 280.5 1.9e-73
gi|26347645|dbj|BAC37471.1| unnamed protein produc ( 241) 1452 279.6 3.6e-73
gi|74178214|dbj|BAE29893.1| unnamed protein produc ( 241) 1446 278.5 7.8e-73
gi|126337622|ref|XP_001367997.1| PREDICTED: hypoth ( 328) 1306 252.6 6.7e-65
gi|60098697|emb|CAH65179.1| hypothetical protein [ ( 234) 1304 252.1 6.8e-65
gi|194386240|dbj|BAG59684.1| unnamed protein produ ( 195) 1205 233.6 2.1e-59
gi|50924806|gb|AAH79714.1| MGC82096 protein [Xenop ( 234) 1187 230.3 2.4e-58
gi|37748613|gb|AAH60023.1| MGC68708 protein [Xenop ( 232) 1143 222.1 7e-56
gi|37589075|gb|AAH59183.1| Zgc:63948 [Danio rerio] ( 235) 1143 222.1 7e-56
gi|47217915|emb|CAG06521.1| unnamed protein produc ( 248) 989 193.5 3.1e-47
gi|194378394|dbj|BAG57947.1| unnamed protein produ ( 222) 977 191.2 1.3e-46
gi|55731749|emb|CAH92579.1| hypothetical protein [ ( 146) 941 184.4 1e-44
gi|149050155|gb|EDM02479.1| Nedd4 family interacti ( 258) 918 180.3 3e-43
gi|62859399|ref|NP_001016994.1| Nedd4 family inter ( 254) 890 175.1 1.1e-41
gi|148668188|gb|EDL00518.1| Nedd4 family interacti ( 153) 885 174.0 1.4e-41
gi|149634932|ref|XP_001510381.1| PREDICTED: simila ( 273) 857 169.0 8e-40
gi|209153974|gb|ACI33219.1| NEDD4 family-interacti ( 172) 852 167.9 1.1e-39
gi|209737230|gb|ACI69484.1| NEDD4 family-interacti ( 210) 824 162.8 4.7e-38
gi|74733098|sp|Q9BT67.1|NFIP1_HUMAN RecName: Full= ( 221) 821 162.2 7.1e-38
gi|149726775|ref|XP_001502054.1| PREDICTED: simila ( 323) 820 162.2 1.1e-37
gi|126291084|ref|XP_001378127.1| PREDICTED: simila ( 303) 817 161.6 1.5e-37
gi|22761723|dbj|BAC11670.1| unnamed protein produc ( 221) 814 160.9 1.8e-37
gi|81883491|sp|Q5U2S1.1|NFIP1_RAT RecName: Full=NE ( 221) 812 160.6 2.3e-37
gi|81878815|sp|Q8R0W6.1|NFIP1_MOUSE RecName: Full= ( 221) 810 160.2 2.9e-37
gi|148678126|gb|EDL10073.1| mCG18343, isoform CRA_ ( 237) 810 160.2 3.1e-37
gi|209733164|gb|ACI67451.1| NEDD4 family-interacti ( 210) 809 160.0 3.2e-37
gi|12004976|gb|AAG44248.1| Nedd4 WW domain-binding ( 280) 810 160.3 3.5e-37
gi|149270003|ref|XP_001475773.1| PREDICTED: simila ( 299) 810 160.3 3.7e-37
gi|82183082|sp|Q6DGP4.1|NFIP1_DANRE RecName: Full= ( 210) 808 159.8 3.7e-37
gi|82225743|sp|Q4V786.1|NFIP1_XENTR RecName: Full= ( 211) 807 159.6 4.2e-37
gi|209730676|gb|ACI66207.1| NEDD4 family-interacti ( 210) 805 159.2 5.4e-37
gi|47219247|emb|CAG11709.1| unnamed protein produc ( 211) 805 159.2 5.4e-37
gi|119226350|gb|AAI28975.1| Ndfip1 protein [Xenopu ( 211) 804 159.1 6.2e-37
>>gi|31455493|dbj|BAC77372.1| putative NFkB activating p (336 aa)
initn: 1942 init1: 1942 opt: 1942 Z-score: 1960.5 bits: 370.9 E(): 1.7e-100
Smith-Waterman score: 1942; 100.000% identity (100.000% similar) in 284 aa overlap (1-284:53-336)
10 20 30
KIAA11 DRGCRNGGGRGPAATTSSTGVAVGAEHGED
::::::::::::::::::::::::::::::
gi|314 APELLRGTATNAEVSAAAAGATGSEELPPGDRGCRNGGGRGPAATTSSTGVAVGAEHGED
30 40 50 60 70 80
40 50 60 70 80 90
KIAA11 SLSRKPDPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPPTSNPAPQIVQAVSSAPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|314 SLSRKPDPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPPTSNPAPQIVQAVSSAPAL
90 100 110 120 130 140
100 110 120 130 140 150
KIAA11 ETDSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|314 ETDSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAA
150 160 170 180 190 200
160 170 180 190 200 210
KIAA11 ETSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|314 ETSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRY
210 220 230 240 250 260
220 230 240 250 260 270
KIAA11 GAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|314 GAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSE
270 280 290 300 310 320
280
KIAA11 SMAAAHRTRYFFLL
::::::::::::::
gi|314 SMAAAHRTRYFFLL
330
>>gi|73921209|sp|Q9NV92.2|NFIP2_HUMAN RecName: Full=NEDD (336 aa)
initn: 1937 init1: 1937 opt: 1937 Z-score: 1955.4 bits: 369.9 E(): 3.2e-100
Smith-Waterman score: 1937; 99.648% identity (100.000% similar) in 284 aa overlap (1-284:53-336)
10 20 30
KIAA11 DRGCRNGGGRGPAATTSSTGVAVGAEHGED
::::::::::::::::::::::::::::::
gi|739 APELLRGTATNAEVSAAAAGATGSEELPPGDRGCRNGGGRGPAATTSSTGVAVGAEHGED
30 40 50 60 70 80
40 50 60 70 80 90
KIAA11 SLSRKPDPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPPTSNPAPQIVQAVSSAPAL
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
gi|739 SLSRKPDPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPPTSNPAPQIVQAASSAPAL
90 100 110 120 130 140
100 110 120 130 140 150
KIAA11 ETDSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 ETDSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAA
150 160 170 180 190 200
160 170 180 190 200 210
KIAA11 ETSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 ETSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRY
210 220 230 240 250 260
220 230 240 250 260 270
KIAA11 GAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 GAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSE
270 280 290 300 310 320
280
KIAA11 SMAAAHRTRYFFLL
::::::::::::::
gi|739 SMAAAHRTRYFFLL
330
>>gi|55733619|emb|CAH93486.1| hypothetical protein [Pong (308 aa)
initn: 1915 init1: 1915 opt: 1915 Z-score: 1933.8 bits: 365.8 E(): 5.2e-99
Smith-Waterman score: 1915; 98.944% identity (99.296% similar) in 284 aa overlap (1-284:25-308)
10 20 30
KIAA11 DRGCRNGGGRGPAATTSSTGVAVGAEHGEDSLSRKP
::::::::::::::::::::::::::::: ::::::
gi|557 GTATNAEVSAPAAGATGSEELPPGDRGCRNGGGRGPAATTSSTGVAVGAEHGEYSLSRKP
10 20 30 40 50 60
40 50 60 70 80 90
KIAA11 DPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPPTSNPAPQIVQAVSSAPALETDSSP
::::::::::::::::::::::::::::::::::: :::::::::::.::::::::::::
gi|557 DPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPSTSNPAPQIVQAASSAPALETDSSP
70 80 90 100 110 120
100 110 120 130 140 150
KIAA11 PPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAAETSQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 PPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAAETSQRI
130 140 150 160 170 180
160 170 180 190 200 210
KIAA11 QEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRYGAICGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 QEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRYGAICGF
190 200 210 220 230 240
220 230 240 250 260 270
KIAA11 GLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSESMAAAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 GLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSESMAAAH
250 260 270 280 290 300
280
KIAA11 RTRYFFLL
::::::::
gi|557 RTRYFFLL
>>gi|114650197|ref|XP_522688.2| PREDICTED: similar to pu (502 aa)
initn: 1915 init1: 1915 opt: 1915 Z-score: 1931.1 bits: 366.0 E(): 7.4e-99
Smith-Waterman score: 1915; 98.944% identity (99.296% similar) in 284 aa overlap (1-284:219-502)
10 20 30
KIAA11 DRGCRNGGGRGPAATTSSTGVAVGAEHGED
::::::::::::::::::::::::::::::
gi|114 APELLRGTATNAEVSAAAAGATGSEELPPGDRGCRNGGGRGPAATTSSTGVAVGAEHGED
190 200 210 220 230 240
40 50 60 70 80 90
KIAA11 SLSRKPDPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPPTSNPAPQIVQAVSSAPAL
:::::: :::::::::::::::::::::::::::::::::: :::::::::::.::::::
gi|114 SLSRKPYPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPSTSNPAPQIVQAASSAPAL
250 260 270 280 290 300
100 110 120 130 140 150
KIAA11 ETDSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 ETDSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAA
310 320 330 340 350 360
160 170 180 190 200 210
KIAA11 ETSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 ETSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRY
370 380 390 400 410 420
220 230 240 250 260 270
KIAA11 GAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 GAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSE
430 440 450 460 470 480
280
KIAA11 SMAAAHRTRYFFLL
::::::::::::::
gi|114 SMAAAHRTRYFFLL
490 500
>>gi|109121025|ref|XP_001092556.1| PREDICTED: Nedd4 fami (336 aa)
initn: 1875 init1: 1875 opt: 1875 Z-score: 1893.1 bits: 358.4 E(): 9.5e-97
Smith-Waterman score: 1875; 97.183% identity (98.239% similar) in 284 aa overlap (1-284:53-336)
10 20 30
KIAA11 DRGCRNGGGRGPAATTSSTGVAVGAEHGED
::: :::::::::::::::::: ::::::.
gi|109 APVLLRGTATNAEVSAAAAGGTGSEELPPGDRGGRNGGGRGPAATTSSTGVAEGAEHGEN
30 40 50 60 70 80
40 50 60 70 80 90
KIAA11 SLSRKPDPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPPTSNPAPQIVQAVSSAPAL
: .::::::::::::::::::::::::::::::: :::::: :::::::::::.::::::
gi|109 SPARKPDPEPGRMDHHQPGTGRYQVLLNEEDNSELSAIEQPSTSNPAPQIVQAASSAPAL
90 100 110 120 130 140
100 110 120 130 140 150
KIAA11 ETDSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 ETDSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAA
150 160 170 180 190 200
160 170 180 190 200 210
KIAA11 ETSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 ETSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRY
210 220 230 240 250 260
220 230 240 250 260 270
KIAA11 GAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 GAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSE
270 280 290 300 310 320
280
KIAA11 SMAAAHRTRYFFLL
::::::::::::::
gi|109 SMAAAHRTRYFFLL
330
>>gi|194221971|ref|XP_001916257.1| PREDICTED: similar to (335 aa)
initn: 1658 init1: 1658 opt: 1761 Z-score: 1778.6 bits: 337.2 E(): 2.3e-90
Smith-Waterman score: 1761; 91.901% identity (95.775% similar) in 284 aa overlap (1-284:53-335)
10 20 30
KIAA11 DRGCRNGGGRGPAATTSSTGVAVGAEHGED
::: :: .::: .::::: : : :::.::
gi|194 APELLHRAAVDAEVSAASAGAAGSEAAGPGDRGGRNRSGRGSSATTSSPGDARGAERGE-
30 40 50 60 70 80
40 50 60 70 80 90
KIAA11 SLSRKPDPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPPTSNPAPQIVQAVSSAPAL
: .::::::::::::::::::::::: ::::::::::.::: :::::::.::.. :: .:
gi|194 SPARKPDPEPGRMDHHQPGTGRYQVLHNEEDNSESSAVEQPSTSNPAPQVVQSTPSAAVL
90 100 110 120 130 140
100 110 120 130 140 150
KIAA11 ETDSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAA
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|194 ETDSSPPPYSSITVEVPTTSDTEVYSEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAA
150 160 170 180 190 200
160 170 180 190 200 210
KIAA11 ETSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 ETSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRY
210 220 230 240 250 260
220 230 240 250 260 270
KIAA11 GAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 GAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSE
270 280 290 300 310 320
280
KIAA11 SMAAAHRTRYFFLL
:::::::.::::::
gi|194 SMAAAHRARYFFLL
330
>>gi|73989388|ref|XP_534156.2| PREDICTED: similar to Ned (321 aa)
initn: 1710 init1: 1710 opt: 1724 Z-score: 1741.6 bits: 330.3 E(): 2.6e-88
Smith-Waterman score: 1724; 90.175% identity (94.737% similar) in 285 aa overlap (1-284:37-321)
10 20
KIAA11 DRGCRNGGGR-GPAATTSSTGVAVGAEHGE
: : :: ::: . ::::::::: :::. :
gi|739 GALGLRRAVGDAEVSAAAAGATGSEAARPGDSGGRNRGGRRAAAATTSSTGVDEGAERRE
10 20 30 40 50 60
30 40 50 60 70 80
KIAA11 DSLSRKPDPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPPTSNPAPQIVQAVSSAPA
:: .::::::::::::::::::::::: ::::::::::.:: ::::.:::.:.. :: .
gi|739 DSPARKPDPEPGRMDHHQPGTGRYQVLHNEEDNSESSALEQSSTSNPTPQIIQTTPSASV
70 80 90 100 110 120
90 100 110 120 130 140
KIAA11 LETDSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAA
:::.::::::::::::::::::.:::.:::::::::::::::::::::::::::::::::
gi|739 LETESSPPPYSSITVEVPTTSDSEVYSEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAA
130 140 150 160 170 180
150 160 170 180 190 200
KIAA11 AETSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGR
:::.:::::::: :::::::::::::::::::::::::::::::::::::::::::::::
gi|739 AETAQRIQEEECQPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGR
190 200 210 220 230 240
210 220 230 240 250 260
KIAA11 YGAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 YGAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMS
250 260 270 280 290 300
270 280
KIAA11 ESMAAAHRTRYFFLL
:::::::::::::::
gi|739 ESMAAAHRTRYFFLL
310 320
>>gi|194040754|ref|XP_001926612.1| PREDICTED: similar to (336 aa)
initn: 1719 init1: 1719 opt: 1719 Z-score: 1736.3 bits: 329.4 E(): 5.2e-88
Smith-Waterman score: 1719; 90.426% identity (95.390% similar) in 282 aa overlap (3-284:55-336)
10 20 30
KIAA11 DRGCRNGGGRGPAATTSSTGVAVGAEHGEDSL
: :: ::: ::::::: :. .::. ::
gi|194 ELLPGAAADSEASAASAAATGSEAAGPGGLGGRNRGGRVAAATTSSTRVTESAERRGDSP
30 40 50 60 70 80
40 50 60 70 80 90
KIAA11 SRKPDPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPPTSNPAPQIVQAVSSAPALET
.::::::::::::::::::::::: ::::::::::.::: ::.:.:: .::.::: .::.
gi|194 ARKPDPEPGRMDHHQPGTGRYQVLHNEEDNSESSAVEQPSTSDPVPQTMQAASSASGLEA
90 100 110 120 130 140
100 110 120 130 140 150
KIAA11 DSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAAET
:::::::::::::::::::::::..:::::::::::::::::::::::::::.:::::::
gi|194 DSSPPPYSSITVEVPTTSDTEVYSDFYPVPPPYSVATSLPTYDEAEKAKAAAIAAAAAET
150 160 170 180 190 200
160 170 180 190 200 210
KIAA11 SQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRYGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 SQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRYGA
210 220 230 240 250 260
220 230 240 250 260 270
KIAA11 ICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSESM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 ICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSESM
270 280 290 300 310 320
280
KIAA11 AAAHRTRYFFLL
::::::::::::
gi|194 AAAHRTRYFFLL
330
>>gi|75948176|gb|AAI05184.1| NDFIP2 protein [Bos taurus] (302 aa)
initn: 1707 init1: 1707 opt: 1707 Z-score: 1724.9 bits: 327.1 E(): 2.2e-87
Smith-Waterman score: 1707; 89.437% identity (92.958% similar) in 284 aa overlap (1-284:19-302)
10 20 30 40
KIAA11 DRGCRNGGGRGPAATTSSTGVAVGAEHGEDSLSRKPDPEPGR
::: :: ::: :::: ::: ::: :: .:::::::::
gi|759 EVSAASAAATGSEAARPGDRGRRNRGGRVAEATTSLKGVAEGAECRGDSPTRKPDPEPGR
10 20 30 40 50 60
50 60 70 80 90 100
KIAA11 MDHHQPGTGRYQVLLNEEDNSESSAIEQPPTSNPAPQIVQAVSSAPALETDSSPPPYSSI
::::: :::::::: ::::::::::.::: ::::.:. :::. :: . ::.:::::::::
gi|759 MDHHQAGTGRYQVLHNEEDNSESSAVEQPSTSNPTPHTVQAAPSASGHETESSPPPYSSI
70 80 90 100 110 120
110 120 130 140 150 160
KIAA11 TVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAAETSQRIQEEECP
:::::::::::::.::::::::::::::::::::::::::::.:::::::::::::::::
gi|759 TVEVPTTSDTEVYSEFYPVPPPYSVATSLPTYDEAEKAKAAALAAAAAETSQRIQEEECP
130 140 150 160 170 180
170 180 190 200 210 220
KIAA11 PRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRYGAICGFGLSLIK
:::::.: ::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|759 PRDDFNDPDQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRYGAICGFGLSLIK
190 200 210 220 230 240
230 240 250 260 270 280
KIAA11 WILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSESMAAAHRTRYFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|759 WILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSESMAAAHRTRYFF
250 260 270 280 290 300
KIAA11 LL
::
gi|759 LL
>>gi|76631750|ref|XP_589802.2| PREDICTED: Nedd4 family i (336 aa)
initn: 1707 init1: 1707 opt: 1707 Z-score: 1724.3 bits: 327.2 E(): 2.4e-87
Smith-Waterman score: 1707; 89.437% identity (92.958% similar) in 284 aa overlap (1-284:53-336)
10 20 30
KIAA11 DRGCRNGGGRGPAATTSSTGVAVGAEHGED
::: :: ::: :::: ::: ::: :
gi|766 APELRPQAAADAEVSAASAAATGSEAARPGDRGRRNRGGRVAEATTSLKGVAEGAECRGD
30 40 50 60 70 80
40 50 60 70 80 90
KIAA11 SLSRKPDPEPGRMDHHQPGTGRYQVLLNEEDNSESSAIEQPPTSNPAPQIVQAVSSAPAL
: .:::::::::::::: :::::::: ::::::::::.::: ::::.:. :::. :: .
gi|766 SPTRKPDPEPGRMDHHQAGTGRYQVLHNEEDNSESSAVEQPSTSNPTPHTVQAAPSASGH
90 100 110 120 130 140
100 110 120 130 140 150
KIAA11 ETDSSPPPYSSITVEVPTTSDTEVYGEFYPVPPPYSVATSLPTYDEAEKAKAAAMAAAAA
::.::::::::::::::::::::::.::::::::::::::::::::::::::::.:::::
gi|766 ETESSPPPYSSITVEVPTTSDTEVYSEFYPVPPPYSVATSLPTYDEAEKAKAAALAAAAA
150 160 170 180 190 200
160 170 180 190 200 210
KIAA11 ETSQRIQEEECPPRDDFSDADQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRY
:::::::::::::::::.: ::::::::::::::::::::::::::::::::::::::::
gi|766 ETSQRIQEEECPPRDDFNDPDQLRVGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRY
210 220 230 240 250 260
220 230 240 250 260 270
KIAA11 GAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|766 GAICGFGLSLIKWILIVRFSDYFTGYFNGQYWLWWIFLVLGLLLFFRGFVNYLKVRNMSE
270 280 290 300 310 320
280
KIAA11 SMAAAHRTRYFFLL
::::::::::::::
gi|766 SMAAAHRTRYFFLL
330
284 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (8 proc)
start: Tue Mar 3 23:48:20 2009 done: Tue Mar 3 23:53:49 2009
Total Scan time: 1388.060 Total Display time: 0.080
Function used was FASTA [version 34.26.5 April 26, 2007]