hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-18551112/chunk_1/iprscan-20080501-18551112.nocrc
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Query sequence: KIAA1155
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07145.5.fs Ataxin-2 C-terminal region                      23.1    8.3e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07145.5.fs   1/1     127   144 ..     1    18 []    23.1  8.3e-06

Alignments of top-scoring domains:
PF07145.5.fs: domain 1 of 1, from 127 to 144: score 23.1, E = 8.3e-06
                   *->kkkskLNPnAkEFVPssk<-*
                       +ks LNP+AkEF+P+ k   
    KIAA1155   127    LSKSNLNPDAKEFIPGEK    144  

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