hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-18515138/chunk_1/iprscan-20080501-18515138.nocrc
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Query sequence: KIAA1153
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04189.4.ls Gcd10p family                                  599.5   2.8e-177   1
PF04189.4.fs Gcd10p family                                  597.8     9e-177   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04189.4.fs   1/1      41   342 ..     1   391 []   597.8   9e-177
PF04189.4.ls   1/1      41   342 ..     1   391 []   599.5 2.8e-177

Alignments of top-scoring domains:
PF04189.4.fs: domain 1 of 1, from 41 to 342: score 597.8, E = 9e-177
                   *->qhaiteGdyssvlIVLqredgkkfkiVvFkfLkpntkvtlGKfGkFe
                      +h+i++Gd+    +VL+red+  fk+V  ++ ++++kvt++K+ +F+
    KIAA1153    41    DHRIRDGDF----VVLKREDV--FKAV--QV-QRRKKVTFEKQ-WFY 77   

                   lddliGkPfGstFevyvdeekgssdealsrkvkelieekklRlLktrEiK
                   ld++iG+++G++Fev    ++g+s          l+++kk R     E  
    KIAA1153    78 LDNVIGHSYGTAFEV----TSGGS----------LQPKKK-R-----E-- 105  

                   DvnnDKDDGqsEPtlSvkekSvsrEVseisessaDNRvviAPsALelvnD
                              EPt            +e++e+++DNR        ++v D
    KIAA1153   106 -----------EPT------------AETKEAGTDNR--------NIV-D 123  

                   dgkaQkLtqEeIeelRAniKeeGlkgeEIIekLienSKTFhnKTefSQEK
                   dgk+QkLtq++I++l    K++G+kgeEI+++LienS+TF++KTef+Q+K
    KIAA1153   124 DGKSQKLTQDDIKAL----KDKGIKGEEIVQQLIENSTTFRDKTEFAQDK 169  

                   YvkkKkKKYaervlvlrLPsiRllaeayykkDPekildlRvDtLsllLtl
                   Y+kkKkKKY+++++v++ Ps+R+l+++yy+++P+ki+++R+DtL+++Ltl
    KIAA1153   170 YIKKKKKKYEAIITVVK-PSTRILSIMYYAREPGKINHMRYDTLAQMLTL 218  

                   aNvkaggnyLVvdeGTgGLllgAllERlGGGDnEskstGkvihiHpGevP
                   +N++ag++++V+++ ++GL+lgA++ER+GG       +G++i+++pG++P
    KIAA1153   219 GNIRAGNKMIVMET-CAGLVLGAMMERMGG-------FGSIIQLYPGGGP 260  

                   qkveavsclnypdetLsrlvevslnkvdsllhksgdasakaikvvkaeen
                   ++ +a++c+++p+++Ls+l+e++lnkvdsllh  g++sak++        
    KIAA1153   261 VR-AATACFGFPKSFLSGLYEFPLNKVDSLLH--GTFSAKML-------- 299  

                   lkeelkddtlvEEsneTieegekspekiEdselkagkkrnkkrk<-*
                    ++e+kd++lvEEsn+T+ee+++s++++Eds+++a+++++++++   
    KIAA1153   300 -SSEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQ    342  

PF04189.4.ls: domain 1 of 1, from 41 to 342: score 599.5, E = 2.8e-177
                   *->qhaiteGdyssvlIVLqredgkkfkiVvFkfLkpntkvtlGKfGkFe
                      +h+i++Gd+    +VL+red+  fk+V  ++ ++++kvt++K+ +F+
    KIAA1153    41    DHRIRDGDF----VVLKREDV--FKAV--QV-QRRKKVTFEKQ-WFY 77   

                   lddliGkPfGstFevyvdeekgssdealsrkvkelieekklRlLktrEiK
                   ld++iG+++G++Fev    ++g+s          l+++kk R     E  
    KIAA1153    78 LDNVIGHSYGTAFEV----TSGGS----------LQPKKK-R-----E-- 105  

                   DvnnDKDDGqsEPtlSvkekSvsrEVseisessaDNRvviAPsALelvnD
                              EPt            +e++e+++DNR        ++v D
    KIAA1153   106 -----------EPT------------AETKEAGTDNR--------NIV-D 123  

                   dgkaQkLtqEeIeelRAniKeeGlkgeEIIekLienSKTFhnKTefSQEK
                   dgk+QkLtq++I++l    K++G+kgeEI+++LienS+TF++KTef+Q+K
    KIAA1153   124 DGKSQKLTQDDIKAL----KDKGIKGEEIVQQLIENSTTFRDKTEFAQDK 169  

                   YvkkKkKKYaervlvlrLPsiRllaeayykkDPekildlRvDtLsllLtl
                   Y+kkKkKKY+++++v++ Ps+R+l+++yy+++P+ki+++R+DtL+++Ltl
    KIAA1153   170 YIKKKKKKYEAIITVVK-PSTRILSIMYYAREPGKINHMRYDTLAQMLTL 218  

                   aNvkaggnyLVvdeGTgGLllgAllERlGGGDnEskstGkvihiHpGevP
                   +N++ag++++V+++ ++GL+lgA++ER+GG       +G++i+++pG++P
    KIAA1153   219 GNIRAGNKMIVMET-CAGLVLGAMMERMGG-------FGSIIQLYPGGGP 260  

                   qkveavsclnypdetLsrlvevslnkvdsllhksgdasakaikvvkaeen
                   ++ +a++c+++p+++Ls+l+e++lnkvdsllh  g++sak++        
    KIAA1153   261 VR-AATACFGFPKSFLSGLYEFPLNKVDSLLH--GTFSAKML-------- 299  

                   lkeelkddtlvEEsneTieegekspekiEdselkagkkrnkkrk<-*
                    ++e+kd++lvEEsn+T+ee+++s++++Eds+++a+++++++++   
    KIAA1153   300 -SSEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQ    342  

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