# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh01454.fasta.nr -Q ../query/KIAA1153.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
KIAA1153, 424 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7826424 sequences
Expectation_n fit: rho(ln(x))= 5.5573+/-0.000188; mu= 9.7490+/- 0.010
mean_var=84.7320+/-16.236, 0's: 32 Z-trim: 35 B-trim: 0 in 0/65
Lambda= 0.139332
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|119630812|gb|EAX10407.1| CGI-09 protein, isofor ( 400) 2664 545.1 1.1e-152
gi|74753354|sp|Q9UJA5.1|TRM6_HUMAN RecName: Full=t ( 497) 2446 501.3 2e-139
gi|114680855|ref|XP_001166710.1| PREDICTED: CGI-09 ( 497) 2435 499.1 9.5e-139
gi|109092811|ref|XP_001115807.1| PREDICTED: simila ( 497) 2415 495.1 1.5e-137
gi|73991615|ref|XP_542900.2| PREDICTED: similar to ( 623) 2333 478.7 1.7e-132
gi|194224168|ref|XP_001494320.2| PREDICTED: tRNA m ( 497) 2302 472.4 1.1e-130
gi|94730586|sp|Q2T9V5.1|TRM6_BOVIN RecName: Full=t ( 497) 2281 468.1 2e-129
gi|194044238|ref|XP_001927431.1| PREDICTED: tRNA m ( 497) 2278 467.5 3e-129
gi|4680657|gb|AAD27718.1|AF132943_1 CGI-09 protein ( 330) 2082 428.0 1.6e-117
gi|149023380|gb|EDL80274.1| similar to CGI-09 prot ( 495) 2056 422.9 8.1e-116
gi|81900066|sp|Q8CE96.1|TRM6_MOUSE RecName: Full=t ( 497) 2049 421.5 2.2e-115
gi|74191011|dbj|BAE39347.1| unnamed protein produc ( 497) 2043 420.3 5e-115
gi|74139227|dbj|BAE38495.1| unnamed protein produc ( 497) 2034 418.5 1.7e-114
gi|126304365|ref|XP_001382135.1| PREDICTED: hypoth ( 491) 1909 393.4 6.3e-107
gi|149640931|ref|XP_001514415.1| PREDICTED: hypoth ( 449) 1731 357.5 3.5e-96
gi|49899853|gb|AAH76885.1| MGC88947 protein [Xenop ( 482) 1486 308.3 2.5e-81
gi|49114940|gb|AAH72807.1| MGC80147 protein [Xenop ( 479) 1476 306.3 9.9e-81
gi|80477647|gb|AAI08583.1| MGC131078 protein [Xeno ( 482) 1432 297.5 4.6e-78
gi|194374707|dbj|BAG62468.1| unnamed protein produ ( 327) 1335 277.8 2.5e-72
gi|81097665|gb|AAI09463.1| Zgc:123193 [Danio rerio ( 464) 1200 250.8 4.8e-64
gi|189533382|ref|XP_001332308.2| PREDICTED: hypoth ( 417) 1030 216.6 8.6e-54
gi|148696412|gb|EDL28359.1| RIKEN cDNA 3300001M20, ( 323) 1027 215.9 1.1e-53
gi|26380298|dbj|BAC25432.1| unnamed protein produc ( 314) 1015 213.5 5.6e-53
gi|53133524|emb|CAG32091.1| hypothetical protein [ ( 203) 870 184.2 2.4e-44
gi|29145085|gb|AAH49083.1| Trmt6 protein [Mus musc ( 175) 833 176.7 3.7e-42
gi|47217267|emb|CAG01490.1| unnamed protein produc ( 454) 811 172.6 1.6e-40
gi|210129525|gb|EEA77199.1| hypothetical protein B ( 422) 799 170.2 8.3e-40
gi|210081867|gb|EEA30671.1| hypothetical protein B ( 424) 791 168.6 2.5e-39
gi|115676734|ref|XP_783506.2| PREDICTED: hypotheti ( 507) 650 140.3 9.9e-31
gi|74855543|sp|Q54UB1.1|TRM6_DICDI RecName: Full=t ( 521) 629 136.1 1.9e-29
gi|221109645|ref|XP_002168557.1| PREDICTED: simila ( 696) 553 120.9 9.4e-25
gi|156215464|gb|EDO36423.1| predicted protein [Nem ( 413) 550 120.1 9.5e-25
gi|215492366|gb|EEC02007.1| tRNA (adenine-N(1)-)-m ( 368) 531 116.3 1.2e-23
gi|47204859|emb|CAF96114.1| unnamed protein produc ( 166) 497 109.2 7.5e-22
gi|222857164|gb|EEE94711.1| predicted protein [Pop ( 434) 489 107.9 4.8e-21
gi|156537038|ref|XP_001601281.1| PREDICTED: simila ( 461) 488 107.7 5.8e-21
gi|162671090|gb|EDQ57648.1| predicted protein [Phy ( 422) 485 107.1 8.3e-21
gi|158277245|gb|EDP03014.1| predicted protein [Chl ( 343) 474 104.8 3.3e-20
gi|116317766|emb|CAH65746.1| OSIGBa0127D24.9 [Oryz ( 475) 452 100.5 9e-19
gi|38345219|emb|CAE01640.2| OSJNBb0021I10.2 [Oryza ( 475) 451 100.3 1e-18
gi|3386622|gb|AAC28552.1| expressed protein [Arabi ( 446) 449 99.8 1.3e-18
gi|222842437|gb|EEE79984.1| predicted protein [Pop ( 387) 446 99.2 1.8e-18
gi|217403300|gb|EEC43253.1| predicted protein [Pha ( 414) 441 98.2 3.7e-18
gi|218194226|gb|EEC76653.1| hypothetical protein O ( 514) 427 95.5 3.1e-17
gi|157335169|emb|CAO60999.1| unnamed protein produ ( 464) 416 93.2 1.3e-16
gi|110758623|ref|XP_001120598.1| PREDICTED: simila ( 349) 413 92.5 1.6e-16
gi|158595372|gb|EDP33931.1| Eukaryotic initiation ( 519) 411 92.3 2.9e-16
gi|157014099|gb|EAA14079.5| AGAP009904-PA [Anophel ( 438) 405 91.0 5.9e-16
gi|116509654|gb|EAU92549.1| hypothetical protein C ( 436) 403 90.6 7.8e-16
gi|46099570|gb|EAK84803.1| hypothetical protein UM ( 618) 402 90.5 1.2e-15
>>gi|119630812|gb|EAX10407.1| CGI-09 protein, isoform CR (400 aa)
initn: 2664 init1: 2664 opt: 2664 Z-score: 2897.3 bits: 545.1 E(): 1.1e-152
Smith-Waterman score: 2664; 100.000% identity (100.000% similar) in 400 aa overlap (25-424:1-400)
10 20 30 40 50 60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
::::::::::::::::::::::::::::::::::::
gi|119 MEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
10 20 30
70 80 90 100 110 120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
40 50 60 70 80 90
130 140 150 160 170 180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
100 110 120 130 140 150
190 200 210 220 230 240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
160 170 180 190 200 210
250 260 270 280 290 300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
220 230 240 250 260 270
310 320 330 340 350 360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
280 290 300 310 320 330
370 380 390 400 410 420
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGCVDGRRQETPQCMWALLQTDWHSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGCVDGRRQETPQCMWALLQTDWHSLS
340 350 360 370 380 390
KIAA11 PCLL
::::
gi|119 PCLL
400
>>gi|74753354|sp|Q9UJA5.1|TRM6_HUMAN RecName: Full=tRNA (497 aa)
initn: 2445 init1: 2445 opt: 2446 Z-score: 2659.2 bits: 501.3 E(): 2e-139
Smith-Waterman score: 2446; 98.168% identity (98.691% similar) in 382 aa overlap (25-405:1-382)
10 20 30 40 50 60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
::::::::::::::::::::::::::::::::::::
gi|747 MEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
10 20 30
70 80 90 100 110 120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
40 50 60 70 80 90
130 140 150 160 170 180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
100 110 120 130 140 150
190 200 210 220 230 240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
160 170 180 190 200 210
250 260 270 280 290 300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
220 230 240 250 260 270
310 320 330 340 350 360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
280 290 300 310 320 330
370 380 390 400 410
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHSL
::::::::::::::::::::::::::::::::::: : .: . ::
gi|747 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRP
340 350 360 370 380 390
420
KIAA11 SPCLL
gi|747 FVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSG
400 410 420 430 440 450
>>gi|114680855|ref|XP_001166710.1| PREDICTED: CGI-09 pro (497 aa)
initn: 2434 init1: 2434 opt: 2435 Z-score: 2647.2 bits: 499.1 E(): 9.5e-139
Smith-Waterman score: 2435; 97.644% identity (98.691% similar) in 382 aa overlap (25-405:1-382)
10 20 30 40 50 60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
::::::::::::::::::::::::::::::::::::
gi|114 MEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
10 20 30
70 80 90 100 110 120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
40 50 60 70 80 90
130 140 150 160 170 180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
100 110 120 130 140 150
190 200 210 220 230 240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
160 170 180 190 200 210
250 260 270 280 290 300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
gi|114 VMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAEMLS
220 230 240 250 260 270
310 320 330 340 350 360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
280 290 300 310 320 330
370 380 390 400 410
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHSL
::::::::::::::::::::::::::::::::::: : .: . ::
gi|114 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRP
340 350 360 370 380 390
420
KIAA11 SPCLL
gi|114 FVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSG
400 410 420 430 440 450
>>gi|109092811|ref|XP_001115807.1| PREDICTED: similar to (497 aa)
initn: 2414 init1: 2414 opt: 2415 Z-score: 2625.5 bits: 495.1 E(): 1.5e-137
Smith-Waterman score: 2415; 96.859% identity (98.429% similar) in 382 aa overlap (25-405:1-382)
10 20 30 40 50 60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
::::::::.:::::::::::::::::::::::::::
gi|109 MEGSGEQPSPQPQHPGDHRIRDGDFVVLKREDVFKA
10 20 30
70 80 90 100 110 120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
gi|109 VQVQRRKKVTFEKQWFYLDNVIGHSYGTTFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
40 50 60 70 80 90
130 140 150 160 170 180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
100 110 120 130 140 150
190 200 210 220 230 240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
160 170 180 190 200 210
250 260 270 280 290 300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::.:::
gi|109 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLNGLYEFPLNKVDSLLHGTFSAEMLS
220 230 240 250 260 270
310 320 330 340 350 360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 SEPKDSALVEGSNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
280 290 300 310 320 330
370 380 390 400 410
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHSL
::::::::::::::::::::::::::::::::::: : .: . ::
gi|109 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRP
340 350 360 370 380 390
420
KIAA11 SPCLL
gi|109 FVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSG
400 410 420 430 440 450
>>gi|73991615|ref|XP_542900.2| PREDICTED: similar to CGI (623 aa)
initn: 2305 init1: 2305 opt: 2333 Z-score: 2535.1 bits: 478.7 E(): 1.7e-132
Smith-Waterman score: 2333; 87.379% identity (94.660% similar) in 412 aa overlap (1-405:97-508)
10 20
KIAA11 VRLAVATTEEEGRDA-----VE-HGDRLSV
::::.:..:.::: : .: .:.:::
gi|739 SGGSDRKAEAARCTWGRCRPEASTSVRLVVVRLAAAAAEDEGRGAGAARGAEARGERLSS
70 80 90 100 110 120
30 40 50 60 70 80
KIAA11 MEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKAVQVQRRKKVTFEKQWFYLDNVIGH
:: ::: ::: ::::::::::::::::::::::::::::.::::::::::::::.:::
gi|739 MEDSGEPLDPQPPHPGDHRIRDGDFVVLKREDVFKAVQVQRKKKVTFEKQWFYLDNIIGH
130 140 150 160 170 180
90 100 110 120 130 140
KIAA11 SYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRNIVDDGKSQKLTQDDIKALKDKGIK
::::.::::.:::::::::.::::.::::::::::::.::::::::::::::::::::::
gi|739 SYGTTFEVTNGGSLQPKKKKEEPTSETKEAGTDNRNIIDDGKSQKLTQDDIKALKDKGIK
190 200 210 220 230 240
150 160 170 180 190 200
KIAA11 GEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAIITVVKPSTRILSIMYYAREPGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 GEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAIITVVKPSTRILSIMYYAREPGKI
250 260 270 280 290 300
210 220 230 240 250 260
KIAA11 NHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGAMMERMGGFGSIIQLYPGGGPVRAA
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
gi|739 NHMRYDTLAQMLTLGNVRAGNKMIVMETCAGLVLGAMMERMGGFGSIIQLYPGGGPVRAA
310 320 330 340 350 360
270 280 290 300 310 320
KIAA11 TACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLSSEPKDSALVEESNGTLEEKQASEQ
::::::::::::::::::::::::::.::::..::.::::::: ::::::::::::.:::
gi|739 TACFGFPKSFLSGLYEFPLNKVDSLLNGTFSVEMLASEPKDSASVEESNGTLEEKQTSEQ
370 380 390 400 410 420
330 340 350 360 370 380
KIAA11 ENEDSMAEAPESNHPEDQETMETISQDPEHKGPKERGSKKDYIQEKQRRQEEQRKRHLEA
.::::.::.:::.:: .::::: .:::::.: :::::.::::::::::::::::::::::
gi|739 DNEDSVAEGPESHHPPEQETMEIVSQDPEYKEPKERGNKKDYIQEKQRRQEEQRKRHLEA
430 440 450 460 470 480
390 400 410 420
KIAA11 AALLSERNADGC-VDGRRQETPQCMWALLQTDWHSLSPCLL
::::::::::: : .: . ::
gi|739 AALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRPFVVYCQYKEPLLECYTKLRERGGV
490 500 510 520 530 540
>>gi|194224168|ref|XP_001494320.2| PREDICTED: tRNA methy (497 aa)
initn: 2301 init1: 2301 opt: 2302 Z-score: 2502.7 bits: 472.4 E(): 1.1e-130
Smith-Waterman score: 2302; 91.885% identity (96.859% similar) in 382 aa overlap (25-405:1-382)
10 20 30 40 50 60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
:: ::::::::: :::::::::::.:::::::::::
gi|194 MEDSGEQPGPQPPHPGDHRIRDGDYVVLKREDVFKA
10 20 30
70 80 90 100 110 120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
::::::::::::::::::::::::::::.::::.:::::::::.::::.:::::::::::
gi|194 VQVQRRKKVTFEKQWFYLDNVIGHSYGTTFEVTNGGSLQPKKKKEEPTSETKEAGTDNRN
40 50 60 70 80 90
130 140 150 160 170 180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 IIDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
100 110 120 130 140 150
190 200 210 220 230 240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|194 IITVVKPSTRILSVMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
160 170 180 190 200 210
250 260 270 280 290 300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
:::::::::::::::::::::::::::::::.::::::::::::::::::.:::::.:::
gi|194 MMERMGGFGSIIQLYPGGGPVRAATACFGFPESFLSGLYEFPLNKVDSLLNGTFSAEMLS
220 230 240 250 260 270
310 320 330 340 350 360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
::::::: ::::::::::::::::::::::::: ::. ::.::::: .:::::.: ::::
gi|194 SEPKDSASVEESNGTLEEKQASEQENEDSMAEASESSPPEEQETMEIVSQDPEYKEPKER
280 290 300 310 320 330
370 380 390 400 410
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHSL
::.::::::::.::::::::.:::::::::::::: : .: . ::
gi|194 GSRKDYIQEKQKRQEEQRKRQLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRP
340 350 360 370 380 390
420
KIAA11 SPCLL
gi|194 FVAYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSG
400 410 420 430 440 450
>>gi|94730586|sp|Q2T9V5.1|TRM6_BOVIN RecName: Full=tRNA (497 aa)
initn: 2280 init1: 2280 opt: 2281 Z-score: 2479.9 bits: 468.1 E(): 2e-129
Smith-Waterman score: 2281; 90.576% identity (96.597% similar) in 382 aa overlap (25-405:1-382)
10 20 30 40 50 60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
::.: .:::::::.::.: :::::::::::::::::
gi|947 MESSEDQPGPQPQYPGNHCIRDGDFVVLKREDVFKA
10 20 30
70 80 90 100 110 120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
::::::::::::::::::::.:::::::.::::.:::::::::.::::.:::::::::::
gi|947 VQVQRRKKVTFEKQWFYLDNIIGHSYGTTFEVTNGGSLQPKKKKEEPTSETKEAGTDNRN
40 50 60 70 80 90
130 140 150 160 170 180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|947 IIDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
100 110 120 130 140 150
190 200 210 220 230 240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
.::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|947 MITVVKPSTRILSVMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
160 170 180 190 200 210
250 260 270 280 290 300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::.:::
gi|947 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLNGTFSAEMLS
220 230 240 250 260 270
310 320 330 340 350 360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
::::: : ::::::::::::.::::::::.::::::::::.:: :: .::::..: :::
gi|947 SEPKDIASVEESNGTLEEKQTSEQENEDSIAEAPESNHPEEQERMEIVSQDPDYKEPKES
280 290 300 310 320 330
370 380 390 400 410
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHSL
:::::::::::::::::.::::::::::::::::: : .: . ::
gi|947 GSKKDYIQEKQRRQEEQKKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRP
340 350 360 370 380 390
420
KIAA11 SPCLL
gi|947 FVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSG
400 410 420 430 440 450
>>gi|194044238|ref|XP_001927431.1| PREDICTED: tRNA methy (497 aa)
initn: 2277 init1: 2277 opt: 2278 Z-score: 2476.7 bits: 467.5 E(): 3e-129
Smith-Waterman score: 2278; 90.576% identity (96.335% similar) in 382 aa overlap (25-405:1-382)
10 20 30 40 50 60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
:::: ::::::: ::::: :::::::::::::::::
gi|194 MEGSDEQPGPQPPHPGDHCIRDGDFVVLKREDVFKA
10 20 30
70 80 90 100 110 120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
::::::::::::::::::::::::.:::.::::.:: ::::::.::::.:::::::::::
gi|194 VQVQRRKKVTFEKQWFYLDNVIGHNYGTTFEVTNGGILQPKKKKEEPTSETKEAGTDNRN
40 50 60 70 80 90
130 140 150 160 170 180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 IIDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
100 110 120 130 140 150
190 200 210 220 230 240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
.::.:::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|194 MITIVKPSTRILSVMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
160 170 180 190 200 210
250 260 270 280 290 300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::.:::
gi|194 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLNGTFSAEMLS
220 230 240 250 260 270
310 320 330 340 350 360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
::::::. .::::::::::: ::::::::.::. ::.:::.::::: ::::::.: ::::
gi|194 SEPKDSTSAEESNGTLEEKQPSEQENEDSVAETQESSHPEEQETMEMISQDPEYKEPKER
280 290 300 310 320 330
370 380 390 400 410
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHSL
:::::::::::::::::.::::::::::::.:::: : .: . ::
gi|194 GSKKDYIQEKQRRQEEQKKRHLEAAALLSEKNADGLIVASRFHPTPLLLSLLDFVAPSRP
340 350 360 370 380 390
420
KIAA11 SPCLL
gi|194 FVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSG
400 410 420 430 440 450
>>gi|4680657|gb|AAD27718.1|AF132943_1 CGI-09 protein [Ho (330 aa)
initn: 2082 init1: 2082 opt: 2082 Z-score: 2266.2 bits: 428.0 E(): 1.6e-117
Smith-Waterman score: 2082; 99.686% identity (99.686% similar) in 318 aa overlap (25-342:1-318)
10 20 30 40 50 60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
::::::::::::::::::::::::::::::::::::
gi|468 MEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
10 20 30
70 80 90 100 110 120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|468 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
40 50 60 70 80 90
130 140 150 160 170 180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|468 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
100 110 120 130 140 150
190 200 210 220 230 240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|468 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
160 170 180 190 200 210
250 260 270 280 290 300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|468 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
220 230 240 250 260 270
310 320 330 340 350 360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
:::::::::::::::::::::: :::::::::::::::::::
gi|468 SEPKDSALVEESNGTLEEKQASGQENEDSMAEAPESNHPEDQGNNGNNFSRSRT
280 290 300 310 320 330
370 380 390 400 410 420
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGCVDGRRQETPQCMWALLQTDWHSLS
>>gi|149023380|gb|EDL80274.1| similar to CGI-09 protein (495 aa)
initn: 2001 init1: 1732 opt: 2056 Z-score: 2235.5 bits: 422.9 E(): 8.1e-116
Smith-Waterman score: 2056; 83.551% identity (92.689% similar) in 383 aa overlap (25-405:1-380)
10 20 30 40 50
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSG-EQPGPQPQHPGDHRIRDGDFVVLKREDVFK
:: :. :::.::: : ::: :.::::::::::::::
gi|149 MELSAAEQPSPQPPHLGDHCIHDGDFVVLKREDVFK
10 20 30
60 70 80 90 100 110
KIAA11 AVQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNR
:::::::::::::::::::::.::::::..:::.:::::: .:: ::::.::::::::::
gi|149 AVQVQRRKKVTFEKQWFYLDNAIGHSYGSTFEVSSGGSLQLRKKLEEPTSETKEAGTDNR
40 50 60 70 80 90
120 130 140 150 160 170
KIAA11 NIVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 NIVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYE
100 110 120 130 140 150
180 190 200 210 220 230
KIAA11 AIITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLG
::::..::::::::::::::::::::::::::::::::::::::::::::::::.:::::
gi|149 AIITILKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCSGLVLG
160 170 180 190 200 210
240 250 260 270 280 290
KIAA11 AMMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKML
:::::::::::::::::: ::::::::::::::::::::.::::::: :::.:::::.::
gi|149 AMMERMGGFGSIIQLYPGDGPVRAATACFGFPKSFLSGLHEFPLNKVKSLLNGTFSAEML
220 230 240 250 260 270
300 310 320 330 340 350
KIAA11 SSEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKE
:::::::. :.:::: :: :. .:: ..::.:..:::: .:. .. . ::: : :::
gi|149 SSEPKDSTPVKESNGELE-KEIAEQADKDSIADGPESN--AEQNPVDIVPGDPESKEPKE
280 290 300 310 320 330
360 370 380 390 400 410
KIAA11 RGSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHS
.:::.:::::::::::::::::.::::::.:::::: : .: . ::
gi|149 KGSKRDYIQEKQRRQEEQRKRHMEAAALLGERNADGLIVASRFHPTPLLLSLLDFVAPSR
340 350 360 370 380 390
420
KIAA11 LSPCLL
gi|149 PFVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLS
400 410 420 430 440 450
424 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (8 proc)
start: Tue Mar 3 22:45:47 2009 done: Tue Mar 3 22:50:30 2009
Total Scan time: 1519.220 Total Display time: 0.140
Function used was FASTA [version 34.26.5 April 26, 2007]