# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh01454.fasta.nr -Q ../query/KIAA1153.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 KIAA1153, 424 aa
 vs /cdna2/lib/nr/nr library

2693465022 residues in 7827732 sequences
 statistics sampled from 60000 to 7826424 sequences
  Expectation_n fit: rho(ln(x))= 5.5573+/-0.000188; mu= 9.7490+/- 0.010
 mean_var=84.7320+/-16.236, 0's: 32 Z-trim: 35  B-trim: 0 in 0/65
 Lambda= 0.139332

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 37, opt: 25, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(7827732)
gi|119630812|gb|EAX10407.1| CGI-09 protein, isofor ( 400) 2664 545.1 1.1e-152
gi|74753354|sp|Q9UJA5.1|TRM6_HUMAN RecName: Full=t ( 497) 2446 501.3  2e-139
gi|114680855|ref|XP_001166710.1| PREDICTED: CGI-09 ( 497) 2435 499.1 9.5e-139
gi|109092811|ref|XP_001115807.1| PREDICTED: simila ( 497) 2415 495.1 1.5e-137
gi|73991615|ref|XP_542900.2| PREDICTED: similar to ( 623) 2333 478.7 1.7e-132
gi|194224168|ref|XP_001494320.2| PREDICTED: tRNA m ( 497) 2302 472.4 1.1e-130
gi|94730586|sp|Q2T9V5.1|TRM6_BOVIN RecName: Full=t ( 497) 2281 468.1  2e-129
gi|194044238|ref|XP_001927431.1| PREDICTED: tRNA m ( 497) 2278 467.5  3e-129
gi|4680657|gb|AAD27718.1|AF132943_1 CGI-09 protein ( 330) 2082 428.0 1.6e-117
gi|149023380|gb|EDL80274.1| similar to CGI-09 prot ( 495) 2056 422.9 8.1e-116
gi|81900066|sp|Q8CE96.1|TRM6_MOUSE RecName: Full=t ( 497) 2049 421.5 2.2e-115
gi|74191011|dbj|BAE39347.1| unnamed protein produc ( 497) 2043 420.3  5e-115
gi|74139227|dbj|BAE38495.1| unnamed protein produc ( 497) 2034 418.5 1.7e-114
gi|126304365|ref|XP_001382135.1| PREDICTED: hypoth ( 491) 1909 393.4 6.3e-107
gi|149640931|ref|XP_001514415.1| PREDICTED: hypoth ( 449) 1731 357.5 3.5e-96
gi|49899853|gb|AAH76885.1| MGC88947 protein [Xenop ( 482) 1486 308.3 2.5e-81
gi|49114940|gb|AAH72807.1| MGC80147 protein [Xenop ( 479) 1476 306.3 9.9e-81
gi|80477647|gb|AAI08583.1| MGC131078 protein [Xeno ( 482) 1432 297.5 4.6e-78
gi|194374707|dbj|BAG62468.1| unnamed protein produ ( 327) 1335 277.8 2.5e-72
gi|81097665|gb|AAI09463.1| Zgc:123193 [Danio rerio ( 464) 1200 250.8 4.8e-64
gi|189533382|ref|XP_001332308.2| PREDICTED: hypoth ( 417) 1030 216.6 8.6e-54
gi|148696412|gb|EDL28359.1| RIKEN cDNA 3300001M20, ( 323) 1027 215.9 1.1e-53
gi|26380298|dbj|BAC25432.1| unnamed protein produc ( 314) 1015 213.5 5.6e-53
gi|53133524|emb|CAG32091.1| hypothetical protein [ ( 203)  870 184.2 2.4e-44
gi|29145085|gb|AAH49083.1| Trmt6 protein [Mus musc ( 175)  833 176.7 3.7e-42
gi|47217267|emb|CAG01490.1| unnamed protein produc ( 454)  811 172.6 1.6e-40
gi|210129525|gb|EEA77199.1| hypothetical protein B ( 422)  799 170.2 8.3e-40
gi|210081867|gb|EEA30671.1| hypothetical protein B ( 424)  791 168.6 2.5e-39
gi|115676734|ref|XP_783506.2| PREDICTED: hypotheti ( 507)  650 140.3 9.9e-31
gi|74855543|sp|Q54UB1.1|TRM6_DICDI RecName: Full=t ( 521)  629 136.1 1.9e-29
gi|221109645|ref|XP_002168557.1| PREDICTED: simila ( 696)  553 120.9 9.4e-25
gi|156215464|gb|EDO36423.1| predicted protein [Nem ( 413)  550 120.1 9.5e-25
gi|215492366|gb|EEC02007.1| tRNA (adenine-N(1)-)-m ( 368)  531 116.3 1.2e-23
gi|47204859|emb|CAF96114.1| unnamed protein produc ( 166)  497 109.2 7.5e-22
gi|222857164|gb|EEE94711.1| predicted protein [Pop ( 434)  489 107.9 4.8e-21
gi|156537038|ref|XP_001601281.1| PREDICTED: simila ( 461)  488 107.7 5.8e-21
gi|162671090|gb|EDQ57648.1| predicted protein [Phy ( 422)  485 107.1 8.3e-21
gi|158277245|gb|EDP03014.1| predicted protein [Chl ( 343)  474 104.8 3.3e-20
gi|116317766|emb|CAH65746.1| OSIGBa0127D24.9 [Oryz ( 475)  452 100.5   9e-19
gi|38345219|emb|CAE01640.2| OSJNBb0021I10.2 [Oryza ( 475)  451 100.3   1e-18
gi|3386622|gb|AAC28552.1| expressed protein [Arabi ( 446)  449 99.8 1.3e-18
gi|222842437|gb|EEE79984.1| predicted protein [Pop ( 387)  446 99.2 1.8e-18
gi|217403300|gb|EEC43253.1| predicted protein [Pha ( 414)  441 98.2 3.7e-18
gi|218194226|gb|EEC76653.1| hypothetical protein O ( 514)  427 95.5 3.1e-17
gi|157335169|emb|CAO60999.1| unnamed protein produ ( 464)  416 93.2 1.3e-16
gi|110758623|ref|XP_001120598.1| PREDICTED: simila ( 349)  413 92.5 1.6e-16
gi|158595372|gb|EDP33931.1| Eukaryotic initiation  ( 519)  411 92.3 2.9e-16
gi|157014099|gb|EAA14079.5| AGAP009904-PA [Anophel ( 438)  405 91.0 5.9e-16
gi|116509654|gb|EAU92549.1| hypothetical protein C ( 436)  403 90.6 7.8e-16
gi|46099570|gb|EAK84803.1| hypothetical protein UM ( 618)  402 90.5 1.2e-15


>>gi|119630812|gb|EAX10407.1| CGI-09 protein, isoform CR  (400 aa)
 initn: 2664 init1: 2664 opt: 2664  Z-score: 2897.3  bits: 545.1 E(): 1.1e-152
Smith-Waterman score: 2664;  100.000% identity (100.000% similar) in 400 aa overlap (25-424:1-400)

               10        20        30        40        50        60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
                               ::::::::::::::::::::::::::::::::::::
gi|119                         MEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
                                       10        20        30      

               70        80        90       100       110       120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
         40        50        60        70        80        90      

              130       140       150       160       170       180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
        100       110       120       130       140       150      

              190       200       210       220       230       240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
        160       170       180       190       200       210      

              250       260       270       280       290       300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
        220       230       240       250       260       270      

              310       320       330       340       350       360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
        280       290       300       310       320       330      

              370       380       390       400       410       420
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGCVDGRRQETPQCMWALLQTDWHSLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGCVDGRRQETPQCMWALLQTDWHSLS
        340       350       360       370       380       390      

           
KIAA11 PCLL
       ::::
gi|119 PCLL
        400

>>gi|74753354|sp|Q9UJA5.1|TRM6_HUMAN RecName: Full=tRNA   (497 aa)
 initn: 2445 init1: 2445 opt: 2446  Z-score: 2659.2  bits: 501.3 E(): 2e-139
Smith-Waterman score: 2446;  98.168% identity (98.691% similar) in 382 aa overlap (25-405:1-382)

               10        20        30        40        50        60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
                               ::::::::::::::::::::::::::::::::::::
gi|747                         MEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
                                       10        20        30      

               70        80        90       100       110       120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
         40        50        60        70        80        90      

              130       140       150       160       170       180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
        100       110       120       130       140       150      

              190       200       210       220       230       240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
        160       170       180       190       200       210      

              250       260       270       280       290       300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
        220       230       240       250       260       270      

              310       320       330       340       350       360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|747 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
        280       290       300       310       320       330      

              370       380       390        400       410         
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHSL
       :::::::::::::::::::::::::::::::::::  : .: . ::              
gi|747 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRP
        340       350       360       370       380       390      

     420                                                           
KIAA11 SPCLL                                                       
                                                                   
gi|747 FVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSG
        400       410       420       430       440       450      

>>gi|114680855|ref|XP_001166710.1| PREDICTED: CGI-09 pro  (497 aa)
 initn: 2434 init1: 2434 opt: 2435  Z-score: 2647.2  bits: 499.1 E(): 9.5e-139
Smith-Waterman score: 2435;  97.644% identity (98.691% similar) in 382 aa overlap (25-405:1-382)

               10        20        30        40        50        60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
                               ::::::::::::::::::::::::::::::::::::
gi|114                         MEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
                                       10        20        30      

               70        80        90       100       110       120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
         40        50        60        70        80        90      

              130       140       150       160       170       180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
        100       110       120       130       140       150      

              190       200       210       220       230       240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
        160       170       180       190       200       210      

              250       260       270       280       290       300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
       .:::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
gi|114 VMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAEMLS
        220       230       240       250       260       270      

              310       320       330       340       350       360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
        280       290       300       310       320       330      

              370       380       390        400       410         
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHSL
       :::::::::::::::::::::::::::::::::::  : .: . ::              
gi|114 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRP
        340       350       360       370       380       390      

     420                                                           
KIAA11 SPCLL                                                       
                                                                   
gi|114 FVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSG
        400       410       420       430       440       450      

>>gi|109092811|ref|XP_001115807.1| PREDICTED: similar to  (497 aa)
 initn: 2414 init1: 2414 opt: 2415  Z-score: 2625.5  bits: 495.1 E(): 1.5e-137
Smith-Waterman score: 2415;  96.859% identity (98.429% similar) in 382 aa overlap (25-405:1-382)

               10        20        30        40        50        60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
                               ::::::::.:::::::::::::::::::::::::::
gi|109                         MEGSGEQPSPQPQHPGDHRIRDGDFVVLKREDVFKA
                                       10        20        30      

               70        80        90       100       110       120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
       ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
gi|109 VQVQRRKKVTFEKQWFYLDNVIGHSYGTTFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
         40        50        60        70        80        90      

              130       140       150       160       170       180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
        100       110       120       130       140       150      

              190       200       210       220       230       240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
        160       170       180       190       200       210      

              250       260       270       280       290       300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
       :::::::::::::::::::::::::::::::::::.::::::::::::::::::::.:::
gi|109 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLNGLYEFPLNKVDSLLHGTFSAEMLS
        220       230       240       250       260       270      

              310       320       330       340       350       360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
       :::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 SEPKDSALVEGSNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
        280       290       300       310       320       330      

              370       380       390        400       410         
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHSL
       :::::::::::::::::::::::::::::::::::  : .: . ::              
gi|109 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRP
        340       350       360       370       380       390      

     420                                                           
KIAA11 SPCLL                                                       
                                                                   
gi|109 FVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSG
        400       410       420       430       440       450      

>>gi|73991615|ref|XP_542900.2| PREDICTED: similar to CGI  (623 aa)
 initn: 2305 init1: 2305 opt: 2333  Z-score: 2535.1  bits: 478.7 E(): 1.7e-132
Smith-Waterman score: 2333;  87.379% identity (94.660% similar) in 412 aa overlap (1-405:97-508)

                                             10              20    
KIAA11                               VRLAVATTEEEGRDA-----VE-HGDRLSV
                                     ::::.:..:.::: :     .: .:.::: 
gi|739 SGGSDRKAEAARCTWGRCRPEASTSVRLVVVRLAAAAAEDEGRGAGAARGAEARGERLSS
         70        80        90       100       110       120      

           30        40        50        60        70        80    
KIAA11 MEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKAVQVQRRKKVTFEKQWFYLDNVIGH
       :: :::   ::: ::::::::::::::::::::::::::::.::::::::::::::.:::
gi|739 MEDSGEPLDPQPPHPGDHRIRDGDFVVLKREDVFKAVQVQRKKKVTFEKQWFYLDNIIGH
        130       140       150       160       170       180      

           90       100       110       120       130       140    
KIAA11 SYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRNIVDDGKSQKLTQDDIKALKDKGIK
       ::::.::::.:::::::::.::::.::::::::::::.::::::::::::::::::::::
gi|739 SYGTTFEVTNGGSLQPKKKKEEPTSETKEAGTDNRNIIDDGKSQKLTQDDIKALKDKGIK
        190       200       210       220       230       240      

          150       160       170       180       190       200    
KIAA11 GEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAIITVVKPSTRILSIMYYAREPGKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 GEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAIITVVKPSTRILSIMYYAREPGKI
        250       260       270       280       290       300      

          210       220       230       240       250       260    
KIAA11 NHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGAMMERMGGFGSIIQLYPGGGPVRAA
       ::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
gi|739 NHMRYDTLAQMLTLGNVRAGNKMIVMETCAGLVLGAMMERMGGFGSIIQLYPGGGPVRAA
        310       320       330       340       350       360      

          270       280       290       300       310       320    
KIAA11 TACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLSSEPKDSALVEESNGTLEEKQASEQ
       ::::::::::::::::::::::::::.::::..::.::::::: ::::::::::::.:::
gi|739 TACFGFPKSFLSGLYEFPLNKVDSLLNGTFSVEMLASEPKDSASVEESNGTLEEKQTSEQ
        370       380       390       400       410       420      

          330       340       350       360       370       380    
KIAA11 ENEDSMAEAPESNHPEDQETMETISQDPEHKGPKERGSKKDYIQEKQRRQEEQRKRHLEA
       .::::.::.:::.:: .::::: .:::::.: :::::.::::::::::::::::::::::
gi|739 DNEDSVAEGPESHHPPEQETMEIVSQDPEYKEPKERGNKKDYIQEKQRRQEEQRKRHLEA
        430       440       450       460       470       480      

          390        400       410       420                       
KIAA11 AALLSERNADGC-VDGRRQETPQCMWALLQTDWHSLSPCLL                   
       :::::::::::  : .: . ::                                      
gi|739 AALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRPFVVYCQYKEPLLECYTKLRERGGV
        490       500       510       520       530       540      

>>gi|194224168|ref|XP_001494320.2| PREDICTED: tRNA methy  (497 aa)
 initn: 2301 init1: 2301 opt: 2302  Z-score: 2502.7  bits: 472.4 E(): 1.1e-130
Smith-Waterman score: 2302;  91.885% identity (96.859% similar) in 382 aa overlap (25-405:1-382)

               10        20        30        40        50        60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
                               :: ::::::::: :::::::::::.:::::::::::
gi|194                         MEDSGEQPGPQPPHPGDHRIRDGDYVVLKREDVFKA
                                       10        20        30      

               70        80        90       100       110       120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
       ::::::::::::::::::::::::::::.::::.:::::::::.::::.:::::::::::
gi|194 VQVQRRKKVTFEKQWFYLDNVIGHSYGTTFEVTNGGSLQPKKKKEEPTSETKEAGTDNRN
         40        50        60        70        80        90      

              130       140       150       160       170       180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
       :.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 IIDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
        100       110       120       130       140       150      

              190       200       210       220       230       240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
       :::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|194 IITVVKPSTRILSVMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
        160       170       180       190       200       210      

              250       260       270       280       290       300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
       :::::::::::::::::::::::::::::::.::::::::::::::::::.:::::.:::
gi|194 MMERMGGFGSIIQLYPGGGPVRAATACFGFPESFLSGLYEFPLNKVDSLLNGTFSAEMLS
        220       230       240       250       260       270      

              310       320       330       340       350       360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
       ::::::: ::::::::::::::::::::::::: ::. ::.::::: .:::::.: ::::
gi|194 SEPKDSASVEESNGTLEEKQASEQENEDSMAEASESSPPEEQETMEIVSQDPEYKEPKER
        280       290       300       310       320       330      

              370       380       390        400       410         
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHSL
       ::.::::::::.::::::::.::::::::::::::  : .: . ::              
gi|194 GSRKDYIQEKQKRQEEQRKRQLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRP
        340       350       360       370       380       390      

     420                                                           
KIAA11 SPCLL                                                       
                                                                   
gi|194 FVAYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSG
        400       410       420       430       440       450      

>>gi|94730586|sp|Q2T9V5.1|TRM6_BOVIN RecName: Full=tRNA   (497 aa)
 initn: 2280 init1: 2280 opt: 2281  Z-score: 2479.9  bits: 468.1 E(): 2e-129
Smith-Waterman score: 2281;  90.576% identity (96.597% similar) in 382 aa overlap (25-405:1-382)

               10        20        30        40        50        60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
                               ::.: .:::::::.::.: :::::::::::::::::
gi|947                         MESSEDQPGPQPQYPGNHCIRDGDFVVLKREDVFKA
                                       10        20        30      

               70        80        90       100       110       120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
       ::::::::::::::::::::.:::::::.::::.:::::::::.::::.:::::::::::
gi|947 VQVQRRKKVTFEKQWFYLDNIIGHSYGTTFEVTNGGSLQPKKKKEEPTSETKEAGTDNRN
         40        50        60        70        80        90      

              130       140       150       160       170       180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
       :.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|947 IIDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
        100       110       120       130       140       150      

              190       200       210       220       230       240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
       .::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|947 MITVVKPSTRILSVMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
        160       170       180       190       200       210      

              250       260       270       280       290       300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::.:::::.:::
gi|947 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLNGTFSAEMLS
        220       230       240       250       260       270      

              310       320       330       340       350       360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
       ::::: : ::::::::::::.::::::::.::::::::::.:: :: .::::..: ::: 
gi|947 SEPKDIASVEESNGTLEEKQTSEQENEDSIAEAPESNHPEEQERMEIVSQDPDYKEPKES
        280       290       300       310       320       330      

              370       380       390        400       410         
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHSL
       :::::::::::::::::.:::::::::::::::::  : .: . ::              
gi|947 GSKKDYIQEKQRRQEEQKKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRP
        340       350       360       370       380       390      

     420                                                           
KIAA11 SPCLL                                                       
                                                                   
gi|947 FVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSG
        400       410       420       430       440       450      

>>gi|194044238|ref|XP_001927431.1| PREDICTED: tRNA methy  (497 aa)
 initn: 2277 init1: 2277 opt: 2278  Z-score: 2476.7  bits: 467.5 E(): 3e-129
Smith-Waterman score: 2278;  90.576% identity (96.335% similar) in 382 aa overlap (25-405:1-382)

               10        20        30        40        50        60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
                               :::: ::::::: ::::: :::::::::::::::::
gi|194                         MEGSDEQPGPQPPHPGDHCIRDGDFVVLKREDVFKA
                                       10        20        30      

               70        80        90       100       110       120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
       ::::::::::::::::::::::::.:::.::::.:: ::::::.::::.:::::::::::
gi|194 VQVQRRKKVTFEKQWFYLDNVIGHNYGTTFEVTNGGILQPKKKKEEPTSETKEAGTDNRN
         40        50        60        70        80        90      

              130       140       150       160       170       180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
       :.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 IIDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
        100       110       120       130       140       150      

              190       200       210       220       230       240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
       .::.:::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|194 MITIVKPSTRILSVMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
        160       170       180       190       200       210      

              250       260       270       280       290       300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::.:::::.:::
gi|194 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLNGTFSAEMLS
        220       230       240       250       260       270      

              310       320       330       340       350       360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
       ::::::. .::::::::::: ::::::::.::. ::.:::.::::: ::::::.: ::::
gi|194 SEPKDSTSAEESNGTLEEKQPSEQENEDSVAETQESSHPEEQETMEMISQDPEYKEPKER
        280       290       300       310       320       330      

              370       380       390        400       410         
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHSL
       :::::::::::::::::.::::::::::::.::::  : .: . ::              
gi|194 GSKKDYIQEKQRRQEEQKKRHLEAAALLSEKNADGLIVASRFHPTPLLLSLLDFVAPSRP
        340       350       360       370       380       390      

     420                                                           
KIAA11 SPCLL                                                       
                                                                   
gi|194 FVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSG
        400       410       420       430       440       450      

>>gi|4680657|gb|AAD27718.1|AF132943_1 CGI-09 protein [Ho  (330 aa)
 initn: 2082 init1: 2082 opt: 2082  Z-score: 2266.2  bits: 428.0 E(): 1.6e-117
Smith-Waterman score: 2082;  99.686% identity (99.686% similar) in 318 aa overlap (25-342:1-318)

               10        20        30        40        50        60
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
                               ::::::::::::::::::::::::::::::::::::
gi|468                         MEGSGEQPGPQPQHPGDHRIRDGDFVVLKREDVFKA
                                       10        20        30      

               70        80        90       100       110       120
KIAA11 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|468 VQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNRN
         40        50        60        70        80        90      

              130       140       150       160       170       180
KIAA11 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|468 IVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEA
        100       110       120       130       140       150      

              190       200       210       220       230       240
KIAA11 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|468 IITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGA
        160       170       180       190       200       210      

              250       260       270       280       290       300
KIAA11 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|468 MMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLS
        220       230       240       250       260       270      

              310       320       330       340       350       360
KIAA11 SEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKER
       :::::::::::::::::::::: :::::::::::::::::::                  
gi|468 SEPKDSALVEESNGTLEEKQASGQENEDSMAEAPESNHPEDQGNNGNNFSRSRT      
        280       290       300       310       320       330      

              370       380       390       400       410       420
KIAA11 GSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGCVDGRRQETPQCMWALLQTDWHSLS

>>gi|149023380|gb|EDL80274.1| similar to CGI-09 protein   (495 aa)
 initn: 2001 init1: 1732 opt: 2056  Z-score: 2235.5  bits: 422.9 E(): 8.1e-116
Smith-Waterman score: 2056;  83.551% identity (92.689% similar) in 383 aa overlap (25-405:1-380)

               10        20         30        40        50         
KIAA11 VRLAVATTEEEGRDAVEHGDRLSVMEGSG-EQPGPQPQHPGDHRIRDGDFVVLKREDVFK
                               :: :. :::.::: : ::: :.::::::::::::::
gi|149                         MELSAAEQPSPQPPHLGDHCIHDGDFVVLKREDVFK
                                       10        20        30      

      60        70        80        90       100       110         
KIAA11 AVQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQPKKKREEPTAETKEAGTDNR
       :::::::::::::::::::::.::::::..:::.:::::: .:: ::::.::::::::::
gi|149 AVQVQRRKKVTFEKQWFYLDNAIGHSYGSTFEVSSGGSLQLRKKLEEPTSETKEAGTDNR
         40        50        60        70        80        90      

     120       130       140       150       160       170         
KIAA11 NIVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 NIVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYE
        100       110       120       130       140       150      

     180       190       200       210       220       230         
KIAA11 AIITVVKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLG
       ::::..::::::::::::::::::::::::::::::::::::::::::::::::.:::::
gi|149 AIITILKPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCSGLVLG
        160       170       180       190       200       210      

     240       250       260       270       280       290         
KIAA11 AMMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKML
       :::::::::::::::::: ::::::::::::::::::::.::::::: :::.:::::.::
gi|149 AMMERMGGFGSIIQLYPGDGPVRAATACFGFPKSFLSGLHEFPLNKVKSLLNGTFSAEML
        220       230       240       250       260       270      

     300       310       320       330       340       350         
KIAA11 SSEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKE
       :::::::. :.:::: :: :. .:: ..::.:..::::   .:. .. .  ::: : :::
gi|149 SSEPKDSTPVKESNGELE-KEIAEQADKDSIADGPESN--AEQNPVDIVPGDPESKEPKE
        280       290        300       310         320       330   

     360       370       380       390        400       410        
KIAA11 RGSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGC-VDGRRQETPQCMWALLQTDWHS
       .:::.:::::::::::::::::.::::::.::::::  : .: . ::             
gi|149 KGSKRDYIQEKQRRQEEQRKRHMEAAALLGERNADGLIVASRFHPTPLLLSLLDFVAPSR
           340       350       360       370       380       390   

      420                                                          
KIAA11 LSPCLL                                                      
                                                                   
gi|149 PFVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLS
           400       410       420       430       440       450   




424 residues in 1 query   sequences
2693465022 residues in 7827732 library sequences
 Tcomplib [34.26] (8 proc)
 start: Tue Mar  3 22:45:47 2009 done: Tue Mar  3 22:50:30 2009
 Total Scan time: 1519.220 Total Display time:  0.140

Function used was FASTA [version 34.26.5 April 26, 2007]