# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hk10430.fasta.nr -Q ../query/KIAA1145.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1145, 467 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826088 sequences Expectation_n fit: rho(ln(x))= 5.7233+/-0.000188; mu= 9.0703+/- 0.010 mean_var=95.7180+/-18.407, 0's: 32 Z-trim: 35 B-trim: 0 in 0/68 Lambda= 0.131092 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|119617916|gb|EAW97510.1| transmembrane and coil ( 477) 2909 560.4 3.6e-157 gi|62512185|sp|Q9ULS5.2|TMCC3_HUMAN RecName: Full= ( 477) 2898 558.3 1.5e-156 gi|55727304|emb|CAH90408.1| hypothetical protein [ ( 477) 2887 556.2 6.4e-156 gi|119617918|gb|EAW97512.1| transmembrane and coil ( 446) 2871 553.2 4.9e-155 gi|149067148|gb|EDM16881.1| transmembrane and coil ( 477) 2775 535.0 1.5e-149 gi|149067147|gb|EDM16880.1| transmembrane and coil ( 460) 2773 534.6 1.9e-149 gi|73978198|ref|XP_539724.2| PREDICTED: similar to ( 634) 2764 533.1 7.9e-149 gi|158518639|sp|Q8R310.2|TMCC3_MOUSE RecName: Full ( 477) 2751 530.5 3.5e-148 gi|148689636|gb|EDL21583.1| transmembrane and coil ( 461) 2749 530.1 4.5e-148 gi|26350269|dbj|BAC38774.1| unnamed protein produc ( 477) 2741 528.6 1.3e-147 gi|149067145|gb|EDM16878.1| transmembrane and coil ( 446) 2737 527.8 2.1e-147 gi|20071532|gb|AAH26867.1| Tmcc3 protein [Mus musc ( 446) 2717 524.0 2.9e-146 gi|83405450|gb|AAI11267.1| Transmembrane and coile ( 477) 2703 521.4 1.9e-145 gi|149637976|ref|XP_001510126.1| PREDICTED: simila ( 446) 2628 507.2 3.4e-141 gi|126339584|ref|XP_001363987.1| PREDICTED: hypoth ( 469) 2565 495.3 1.4e-137 gi|26348106|dbj|BAC37701.1| unnamed protein produc ( 425) 2540 490.5 3.3e-136 gi|118082500|ref|XP_416147.2| PREDICTED: hypotheti ( 471) 2506 484.2 3.1e-134 gi|109098320|ref|XP_001106781.1| PREDICTED: simila ( 383) 2391 462.3 9.4e-128 gi|111308983|gb|AAI21250.1| Hypothetical protein M ( 473) 2360 456.5 6.4e-126 gi|119617917|gb|EAW97511.1| transmembrane and coil ( 303) 1935 376.0 7.2e-102 gi|13874437|dbj|BAB46924.1| cerebral protein-11 [H ( 484) 1579 308.8 1.9e-81 gi|114572099|ref|XP_001160901.1| PREDICTED: transm ( 484) 1578 308.7 2.2e-81 gi|109497859|ref|XP_223107.4| PREDICTED: similar t ( 628) 1574 308.0 4.4e-81 gi|149058641|gb|EDM09798.1| similar to RIKEN cDNA ( 706) 1574 308.0 4.8e-81 gi|119611952|gb|EAW91546.1| transmembrane and coil ( 469) 1571 307.3 5.3e-81 gi|119611953|gb|EAW91547.1| transmembrane and coil ( 474) 1571 307.3 5.3e-81 gi|26996665|gb|AAH41019.1| TMCC2 protein [Homo sap ( 505) 1571 307.3 5.6e-81 gi|109018695|ref|XP_001094238.1| PREDICTED: simila ( 484) 1570 307.1 6.2e-81 gi|119611954|gb|EAW91548.1| transmembrane and coil ( 631) 1571 307.4 6.6e-81 gi|62512158|sp|O75069.3|TMCC2_HUMAN RecName: Full= ( 709) 1571 307.5 7.2e-81 gi|114572097|ref|XP_001160940.1| PREDICTED: hypoth ( 631) 1570 307.2 7.5e-81 gi|114572091|ref|XP_001160985.1| PREDICTED: hypoth ( 709) 1570 307.3 8.2e-81 gi|189067312|dbj|BAG37022.1| unnamed protein produ ( 484) 1567 306.6 9.1e-81 gi|193788245|dbj|BAG53139.1| unnamed protein produ ( 469) 1566 306.4 1e-80 gi|109018693|ref|XP_001094115.1| PREDICTED: simila ( 469) 1562 305.6 1.7e-80 gi|109018691|ref|XP_001094361.1| PREDICTED: simila ( 632) 1562 305.7 2.1e-80 gi|109018689|ref|XP_001094601.1| PREDICTED: simila ( 710) 1562 305.8 2.3e-80 gi|74186327|dbj|BAE42939.1| unnamed protein produc ( 471) 1557 304.7 3.3e-80 gi|74182002|dbj|BAE34072.1| unnamed protein produc ( 628) 1557 304.8 4.1e-80 gi|62511208|sp|Q80W04.1|TMCC2_MOUSE RecName: Full= ( 706) 1557 304.8 4.5e-80 gi|74153028|dbj|BAE34508.1| unnamed protein produc ( 471) 1546 302.6 1.4e-79 gi|55728914|emb|CAH91195.1| hypothetical protein [ ( 596) 1535 300.6 7.1e-79 gi|56207755|emb|CAI20779.1| novel protein [Danio r ( 476) 1463 286.9 7.5e-75 gi|118102390|ref|XP_417961.2| PREDICTED: similar t ( 686) 1440 282.7 2e-73 gi|94732133|emb|CAK04428.1| novel protein [Danio r ( 440) 1416 278.0 3.4e-72 gi|74005896|ref|XP_545686.2| PREDICTED: similar to ( 723) 1399 274.9 4.5e-71 gi|194210223|ref|XP_001915454.1| PREDICTED: simila ( 612) 1395 274.1 6.7e-71 gi|126306713|ref|XP_001365193.1| PREDICTED: hypoth ( 720) 1388 272.9 1.9e-70 gi|47218344|emb|CAG04176.1| unnamed protein produc ( 503) 1292 254.6 4.3e-65 gi|118097107|ref|XP_414456.2| PREDICTED: similar t ( 649) 1280 252.4 2.5e-64 >>gi|119617916|gb|EAW97510.1| transmembrane and coiled-c (477 aa) initn: 2907 init1: 2907 opt: 2909 Z-score: 2978.0 bits: 560.4 E(): 3.6e-157 Smith-Waterman score: 2909; 97.639% identity (97.854% similar) in 466 aa overlap (4-467:12-477) 10 20 30 40 50 KIAA11 ASCRSCSAPG--FAVWPLVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILD :. : :: :::::::::::::::::::::::::::::::::: gi|119 MPGSDTALTVDRTYSDPGRHHRCKSRVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILD 10 20 30 40 50 60 60 70 80 90 100 110 KIAA11 FHKVKLTADSLKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQVFEKKNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FHKVKLTADSLKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQVFEKKNQ 70 80 90 100 110 120 120 130 140 150 160 170 KIAA11 KSAHSIAQLQKKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KSAHSIAQLQKKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHC 130 140 150 160 170 180 180 190 200 210 220 230 KIAA11 MESSKSGMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASARAYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MESSKSGMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASARAYG 190 200 210 220 230 240 240 250 260 270 280 290 KIAA11 GSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDT 250 260 270 280 290 300 300 310 320 330 340 350 KIAA11 QAQLAEDIEALKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QAQLAEDIEALKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELAS 310 320 330 340 350 360 360 370 380 390 400 410 KIAA11 IEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRCINVILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRCINVILA 370 380 390 400 410 420 420 430 440 450 460 KIAA11 FMTVILVCVSTIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMIIPR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FMTVILVCVSTIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMIIPR 430 440 450 460 470 >>gi|62512185|sp|Q9ULS5.2|TMCC3_HUMAN RecName: Full=Tran (477 aa) initn: 2896 init1: 2896 opt: 2898 Z-score: 2966.8 bits: 558.3 E(): 1.5e-156 Smith-Waterman score: 2898; 97.425% identity (97.639% similar) in 466 aa overlap (4-467:12-477) 10 20 30 40 50 KIAA11 ASCRSCSAPG--FAVWPLVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILD :. : :: :::::::::::::::::::::::::::::::::: gi|625 MPGSDTALTVDRTYSDPGRHHRCKSRVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILD 10 20 30 40 50 60 60 70 80 90 100 110 KIAA11 FHKVKLTADSLKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQVFEKKNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 FHKVKLTADSLKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQVFEKKNQ 70 80 90 100 110 120 120 130 140 150 160 170 KIAA11 KSAHSIAQLQKKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 KSAHSIAQLQKKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHC 130 140 150 160 170 180 180 190 200 210 220 230 KIAA11 MESSKSGMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASARAYG ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|625 MESSKSGMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRQEASARAYG 190 200 210 220 230 240 240 250 260 270 280 290 KIAA11 GSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 GSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDT 250 260 270 280 290 300 300 310 320 330 340 350 KIAA11 QAQLAEDIEALKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 QAQLAEDIEALKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELAS 310 320 330 340 350 360 360 370 380 390 400 410 KIAA11 IEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRCINVILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 IEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRCINVILA 370 380 390 400 410 420 420 430 440 450 460 KIAA11 FMTVILVCVSTIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMIIPR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|625 FMTVILVCVSTIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMIIPR 430 440 450 460 470 >>gi|55727304|emb|CAH90408.1| hypothetical protein [Pong (477 aa) initn: 2885 init1: 2885 opt: 2887 Z-score: 2955.5 bits: 556.2 E(): 6.4e-156 Smith-Waterman score: 2887; 96.567% identity (97.854% similar) in 466 aa overlap (4-467:12-477) 10 20 30 40 50 KIAA11 ASCRSCSAPG--FAVWPLVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILD :. : :: :::::::::::::::::::::::::::::::::: gi|557 MPGSDTALTVDRTYSDPGRHHRCKSRVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILD 10 20 30 40 50 60 60 70 80 90 100 110 KIAA11 FHKVKLTADSLKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQVFEKKNQ :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|557 FHKVKLTADSLKQKILKVTEQIKIEQTSRDGNVAEYLKLVNSADKQQAGRIKQVFEKKNQ 70 80 90 100 110 120 120 130 140 150 160 170 KIAA11 KSAHSIAQLQKKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 KSAHSIAQLQKKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHC 130 140 150 160 170 180 180 190 200 210 220 230 KIAA11 MESSKSGMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASARAYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 MESSKSGMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASARAYG 190 200 210 220 230 240 240 250 260 270 280 290 KIAA11 GSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 GSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDT 250 260 270 280 290 300 300 310 320 330 340 350 KIAA11 QAQLAEDIEALKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELAS :.::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|557 QVQLAEDIEALKMQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELAS 310 320 330 340 350 360 360 370 380 390 400 410 KIAA11 IEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRCINVILA ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|557 IEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGKCINVILA 370 380 390 400 410 420 420 430 440 450 460 KIAA11 FMTVILVCVSTIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMIIPR ::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|557 FMTVILVCVSTIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMILPR 430 440 450 460 470 >>gi|119617918|gb|EAW97512.1| transmembrane and coiled-c (446 aa) initn: 2871 init1: 2871 opt: 2871 Z-score: 2939.6 bits: 553.2 E(): 4.9e-155 Smith-Waterman score: 2871; 100.000% identity (100.000% similar) in 446 aa overlap (22-467:1-446) 10 20 30 40 50 60 KIAA11 ASCRSCSAPGFAVWPLVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILDFHKVKLTADS ::::::::::::::::::::::::::::::::::::::: gi|119 MNTLSLPLNIRRGGSDTNLNFDVPDGILDFHKVKLTADS 10 20 30 70 80 90 100 110 120 KIAA11 LKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQVFEKKNQKSAHSIAQLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQVFEKKNQKSAHSIAQLQ 40 50 60 70 80 90 130 140 150 160 170 180 KIAA11 KKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHCMESSKSGMPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHCMESSKSGMPG 100 110 120 130 140 150 190 200 210 220 230 240 KIAA11 VSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASARAYGGSATIVNKPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASARAYGGSATIVNKPK 160 170 180 190 200 210 250 260 270 280 290 300 KIAA11 YGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDTQAQLAEDIEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDTQAQLAEDIEA 220 230 240 250 260 270 310 320 330 340 350 360 KIAA11 LKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELASIEEKVAYQAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELASIEEKVAYQAY 280 290 300 310 320 330 370 380 390 400 410 420 KIAA11 ERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRCINVILAFMTVILVCVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRCINVILAFMTVILVCVS 340 350 360 370 380 390 430 440 450 460 KIAA11 TIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMIIPR ::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMIIPR 400 410 420 430 440 >>gi|149067148|gb|EDM16881.1| transmembrane and coiled-c (477 aa) initn: 2773 init1: 2773 opt: 2775 Z-score: 2841.0 bits: 535.0 E(): 1.5e-149 Smith-Waterman score: 2775; 92.704% identity (96.781% similar) in 466 aa overlap (4-467:12-477) 10 20 30 40 50 KIAA11 ASCRSCSAPG--FAVWPLVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILD :. : :: :::::::::::::::::::::::::::::::::: gi|149 MPGSDTALTVDRTYSDPGRHHRCKSRVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILD 10 20 30 40 50 60 60 70 80 90 100 110 KIAA11 FHKVKLTADSLKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQVFEKKNQ ::::::.::::.::::::::::::::::::::::::::::..:::::::::::::::::: gi|149 FHKVKLSADSLRQKILKVTEQIKIEQTSRDGNVAEYLKLVSSADKQQAGRIKQVFEKKNQ 70 80 90 100 110 120 120 130 140 150 160 170 KIAA11 KSAHSIAQLQKKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHC ::::::::::::::::::::::::::::.::::::::: ::.:..::::::::::::::: gi|149 KSAHSIAQLQKKLEQYHRKLREIEQNGATRSSKDISKDSLKEIQHSLKDAHVKSRTAPHC 130 140 150 160 170 180 180 190 200 210 220 230 KIAA11 MESSKSGMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASARAYG .:::::.:::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|149 LESSKSSMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASPRAYG 190 200 210 220 230 240 240 250 260 270 280 290 KIAA11 GSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDT ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: : gi|149 GSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAIILEELREIKVT 250 260 270 280 290 300 300 310 320 330 340 350 KIAA11 QAQLAEDIEALKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELAS ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|149 QAQLAEDIEALKVQFKREYGFISQTLQEERYRYERLEDQLHDLTELHQHETANLKQELAS 310 320 330 340 350 360 360 370 380 390 400 410 KIAA11 IEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRCINVILA :::::::::::::::::::::::::::::::::::::.::::.::::::::.::::.:: gi|149 AEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQTLQTDAVNAKVLLGKCINVVLA 370 380 390 400 410 420 420 430 440 450 460 KIAA11 FMTVILVCVSTIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMIIPR :::::::::::.::::::::::: ::::::::::::::::::::::::::::.:::: gi|149 FMTVILVCVSTLAKFVSPMMKSRSHILGTFFAVTLLAIFCKNWDHILCAIERIIIPR 430 440 450 460 470 >>gi|149067147|gb|EDM16880.1| transmembrane and coiled-c (460 aa) initn: 2773 init1: 2773 opt: 2773 Z-score: 2839.2 bits: 534.6 E(): 1.9e-149 Smith-Waterman score: 2773; 94.900% identity (98.891% similar) in 451 aa overlap (17-467:10-460) 10 20 30 40 50 60 KIAA11 ASCRSCSAPGFAVWPLVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILDFHKVKLTADS ::::::::::::::::::::::::::::::::::::::::.::: gi|149 MMLRKEGVKVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILDFHKVKLSADS 10 20 30 40 50 70 80 90 100 110 120 KIAA11 LKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQVFEKKNQKSAHSIAQLQ :.::::::::::::::::::::::::::::..:::::::::::::::::::::::::::: gi|149 LRQKILKVTEQIKIEQTSRDGNVAEYLKLVSSADKQQAGRIKQVFEKKNQKSAHSIAQLQ 60 70 80 90 100 110 130 140 150 160 170 180 KIAA11 KKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHCMESSKSGMPG ::::::::::::::::::.::::::::: ::.:..:::::::::::::::.:::::.::: gi|149 KKLEQYHRKLREIEQNGATRSSKDISKDSLKEIQHSLKDAHVKSRTAPHCLESSKSSMPG 120 130 140 150 160 170 190 200 210 220 230 240 KIAA11 VSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASARAYGGSATIVNKPK ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|149 VSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASPRAYGGSATIVNKPK 180 190 200 210 220 230 250 260 270 280 290 300 KIAA11 YGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDTQAQLAEDIEA ::::::::::::::::::::::::::::::::::::::.::::::::: ::::::::::: gi|149 YGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAIILEELREIKVTQAQLAEDIEA 240 250 260 270 280 290 310 320 330 340 350 360 KIAA11 LKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELASIEEKVAYQAY ::::::::::::::::::::::::::::::::::.::::::::::::::: ::::::::: gi|149 LKVQFKREYGFISQTLQEERYRYERLEDQLHDLTELHQHETANLKQELASAEEKVAYQAY 300 310 320 330 340 350 370 380 390 400 410 420 KIAA11 ERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRCINVILAFMTVILVCVS ::::::::::::::::::::::::::::.::::.::::::::.::::.:::::::::::: gi|149 ERSRDIQEALESCQTRISKLELHQQEQQTLQTDAVNAKVLLGKCINVVLAFMTVILVCVS 360 370 380 390 400 410 430 440 450 460 KIAA11 TIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMIIPR :.::::::::::: ::::::::::::::::::::::::::::.:::: gi|149 TLAKFVSPMMKSRSHILGTFFAVTLLAIFCKNWDHILCAIERIIIPR 420 430 440 450 460 >>gi|73978198|ref|XP_539724.2| PREDICTED: similar to tra (634 aa) initn: 2764 init1: 2764 opt: 2764 Z-score: 2828.1 bits: 533.1 E(): 7.9e-149 Smith-Waterman score: 2764; 94.260% identity (98.896% similar) in 453 aa overlap (15-467:182-634) 10 20 30 40 KIAA11 ASCRSCSAPGFAVWPLVERHDMNTLSLPLNIRRGGSDTNLNFDV :.:::::::::::::::::::::::::::: gi|739 CGGGLLRAVGWERKRQWGSVHLHHRGSSHHPMVERHDMNTLSLPLNIRRGGSDTNLNFDV 160 170 180 190 200 210 50 60 70 80 90 100 KIAA11 PDGILDFHKVKLTADSLKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQV ::::::::::::.:::::::::::::::::::::::::::::::::..:::::::::::: gi|739 PDGILDFHKVKLSADSLKQKILKVTEQIKIEQTSRDGNVAEYLKLVSSADKQQAGRIKQV 220 230 240 250 260 270 110 120 130 140 150 160 KIAA11 FEKKNQKSAHSIAQLQKKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKS ::::::::::::::::::::::::::::::::::::.:::::::.:::...::::::.:: gi|739 FEKKNQKSAHSIAQLQKKLEQYHRKLREIEQNGASRNSKDISKDNLKDLQHSLKDAHAKS 280 290 300 310 320 330 170 180 190 200 210 220 KIAA11 RTAPHCMESSKSGMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEA ::::: : :::.:::::::::::::.::::::::::::::::::::::::::::::::. gi|739 RTAPHSTECSKSSMPGVSLTPPVFVFSKSREFANLIRNKFGSADNIAHLKNSLEEFRPEG 340 350 360 370 380 390 230 240 250 260 270 280 KIAA11 SARAYGGSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEEL : :::::::::::::::::::::::::::::::::::::::.::.::::::::..::::: gi|739 SPRAYGGSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGASGAGTLDSQGKLTMILEEL 400 410 420 430 440 450 290 300 310 320 330 340 KIAA11 REIKDTQAQLAEDIEALKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 REIKDTQAQLAEDIEALKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANL 460 470 480 490 500 510 350 360 370 380 390 400 KIAA11 KQELASIEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|739 KQELASIEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGKC 520 530 540 550 560 570 410 420 430 440 450 460 KIAA11 INVILAFMTVILVCVSTIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMI :::::::::::::::::::::.::::::: ::::::::::::::::::::::.:::::.: gi|739 INVILAFMTVILVCVSTIAKFISPMMKSRFHILGTFFAVTLLAIFCKNWDHIVCAIERII 580 590 600 610 620 630 KIAA11 IPR ::: gi|739 IPR >>gi|158518639|sp|Q8R310.2|TMCC3_MOUSE RecName: Full=Tra (477 aa) initn: 2749 init1: 2749 opt: 2751 Z-score: 2816.5 bits: 530.5 E(): 3.5e-148 Smith-Waterman score: 2751; 91.631% identity (96.567% similar) in 466 aa overlap (4-467:12-477) 10 20 30 40 50 KIAA11 ASCRSCSAPG--FAVWPLVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILD :. : :: :.:::::::::::::::::::::::::::::::: gi|158 MPGSDTALTVDRTYSDPGRHHRCKSRVDRHDMNTLSLPLNIRRGGSDTNLNFDVPDGILD 10 20 30 40 50 60 60 70 80 90 100 110 KIAA11 FHKVKLTADSLKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQVFEKKNQ ::::::.::::.::::::::::::::::::::::::::::..:::::::::::::::::: gi|158 FHKVKLNADSLRQKILKVTEQIKIEQTSRDGNVAEYLKLVSSADKQQAGRIKQVFEKKNQ 70 80 90 100 110 120 120 130 140 150 160 170 KIAA11 KSAHSIAQLQKKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHC :::::::::::::::::::::::::::..::::::::: ::.::.::::::::::::::: gi|158 KSAHSIAQLQKKLEQYHRKLREIEQNGVTRSSKDISKDSLKEIHHSLKDAHVKSRTAPHC 130 140 150 160 170 180 180 190 200 210 220 230 KIAA11 MESSKSGMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASARAYG .:::::.:::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|158 LESSKSSMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASPRAYG 190 200 210 220 230 240 240 250 260 270 280 290 KIAA11 GSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDT :::::::::::::::::::::::::::::::::::::.::::::::.: :.::::::: : gi|158 GSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGTSTLDSQGKIAKIMEELREIKVT 250 260 270 280 290 300 300 310 320 330 340 350 KIAA11 QAQLAEDIEALKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELAS :.::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|158 QTQLAEDIEALKVQFKREYGFISQTLQEERYRYERLEDQLHDLTELHQHETANLKQELAS 310 320 330 340 350 360 360 370 380 390 400 410 KIAA11 IEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRCINVILA :::::::::::::::::::::::::::::::::::::.::::.::::::::.::::.:: gi|158 AEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQTLQTDAVNAKVLLGKCINVVLA 370 380 390 400 410 420 420 430 440 450 460 KIAA11 FMTVILVCVSTIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMIIPR :::::::::::.::::::::::: ::::::::::::::::::::::::::::.:::: gi|158 FMTVILVCVSTLAKFVSPMMKSRSHILGTFFAVTLLAIFCKNWDHILCAIERIIIPR 430 440 450 460 470 >>gi|148689636|gb|EDL21583.1| transmembrane and coiled c (461 aa) initn: 2749 init1: 2749 opt: 2749 Z-score: 2814.7 bits: 530.1 E(): 4.5e-148 Smith-Waterman score: 2749; 93.792% identity (98.670% similar) in 451 aa overlap (17-467:11-461) 10 20 30 40 50 60 KIAA11 ASCRSCSAPGFAVWPLVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILDFHKVKLTADS :.::::::::::::::::::::::::::::::::::::::.::: gi|148 MMLMRKEGMKVDRHDMNTLSLPLNIRRGGSDTNLNFDVPDGILDFHKVKLNADS 10 20 30 40 50 70 80 90 100 110 120 KIAA11 LKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQVFEKKNQKSAHSIAQLQ :.::::::::::::::::::::::::::::..:::::::::::::::::::::::::::: gi|148 LRQKILKVTEQIKIEQTSRDGNVAEYLKLVSSADKQQAGRIKQVFEKKNQKSAHSIAQLQ 60 70 80 90 100 110 130 140 150 160 170 180 KIAA11 KKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHCMESSKSGMPG :::::::::::::::::..::::::::: ::.::.:::::::::::::::.:::::.::: gi|148 KKLEQYHRKLREIEQNGVTRSSKDISKDSLKEIHHSLKDAHVKSRTAPHCLESSKSSMPG 120 130 140 150 160 170 190 200 210 220 230 240 KIAA11 VSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASARAYGGSATIVNKPK ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|148 VSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASPRAYGGSATIVNKPK 180 190 200 210 220 230 250 260 270 280 290 300 KIAA11 YGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDTQAQLAEDIEA :::::::::::::::::::::::::::.::::::::.: :.::::::: ::.:::::::: gi|148 YGSDDECSSGTSGSADSNGNQSFGAGGTSTLDSQGKIAKIMEELREIKVTQTQLAEDIEA 240 250 260 270 280 290 310 320 330 340 350 360 KIAA11 LKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELASIEEKVAYQAY ::::::::::::::::::::::::::::::::::.::::::::::::::: ::::::::: gi|148 LKVQFKREYGFISQTLQEERYRYERLEDQLHDLTELHQHETANLKQELASAEEKVAYQAY 300 310 320 330 340 350 370 380 390 400 410 420 KIAA11 ERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRCINVILAFMTVILVCVS ::::::::::::::::::::::::::::.::::.::::::::.::::.:::::::::::: gi|148 ERSRDIQEALESCQTRISKLELHQQEQQTLQTDAVNAKVLLGKCINVVLAFMTVILVCVS 360 370 380 390 400 410 430 440 450 460 KIAA11 TIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMIIPR :.::::::::::: ::::::::::::::::::::::::::::.:::: gi|148 TLAKFVSPMMKSRSHILGTFFAVTLLAIFCKNWDHILCAIERIIIPR 420 430 440 450 460 >>gi|26350269|dbj|BAC38774.1| unnamed protein product [M (477 aa) initn: 2739 init1: 2739 opt: 2741 Z-score: 2806.3 bits: 528.6 E(): 1.3e-147 Smith-Waterman score: 2741; 91.416% identity (96.352% similar) in 466 aa overlap (4-467:12-477) 10 20 30 40 50 KIAA11 ASCRSCSAPG--FAVWPLVERHDMNTLSLPLNIRRGGSDTNLNFDVPDGILD :. : :: :.:::::::::::::::::::::::::::::::: gi|263 MPGSDTALTVDRTYSDPGRHHRCKSRVDRHDMNTLSLPLNIRRGGSDTNLNFDVPDGILD 10 20 30 40 50 60 60 70 80 90 100 110 KIAA11 FHKVKLTADSLKQKILKVTEQIKIEQTSRDGNVAEYLKLVNNADKQQAGRIKQVFEKKNQ ::::::.::::.::::::::::::::::::::::::::::..:::::::::::::::::: gi|263 FHKVKLNADSLRQKILKVTEQIKIEQTSRDGNVAEYLKLVSSADKQQAGRIKQVFEKKNQ 70 80 90 100 110 120 120 130 140 150 160 170 KIAA11 KSAHSIAQLQKKLEQYHRKLREIEQNGASRSSKDISKDHLKDIHRSLKDAHVKSRTAPHC :::::::::::::::::::::::::::..::::::::: ::.::.::::::::::::::: gi|263 KSAHSIAQLQKKLEQYHRKLREIEQNGVTRSSKDISKDSLKEIHHSLKDAHVKSRTAPHC 130 140 150 160 170 180 180 190 200 210 220 230 KIAA11 MESSKSGMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASARAYG .:::::.:::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|263 LESSKSSMPGVSLTPPVFVFNKSREFANLIRNKFGSADNIAHLKNSLEEFRPEASPRAYG 190 200 210 220 230 240 240 250 260 270 280 290 KIAA11 GSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGASTLDSQGKLAVILEELREIKDT :::::::::::::::::::::::::::::::::::::.::::::::.: :.::::::: : gi|263 GSATIVNKPKYGSDDECSSGTSGSADSNGNQSFGAGGTSTLDSQGKIAKIMEELREIKVT 250 260 270 280 290 300 300 310 320 330 340 350 KIAA11 QAQLAEDIEALKVQFKREYGFISQTLQEERYRYERLEDQLHDLTDLHQHETANLKQELAS :.:::::::::::::: :::::::::::::::::::::::::::.::::::::::::::: gi|263 QTQLAEDIEALKVQFKGEYGFISQTLQEERYRYERLEDQLHDLTELHQHETANLKQELAS 310 320 330 340 350 360 360 370 380 390 400 410 KIAA11 IEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQALQTDTVNAKVLLGRCINVILA :::::::::::::::::::::::::::::::::::::.::::.::::::::.::::.:: gi|263 AEEKVAYQAYERSRDIQEALESCQTRISKLELHQQEQQTLQTDAVNAKVLLGKCINVVLA 370 380 390 400 410 420 420 430 440 450 460 KIAA11 FMTVILVCVSTIAKFVSPMMKSRCHILGTFFAVTLLAIFCKNWDHILCAIERMIIPR :::::::::::.::::::::::: ::::::::::::::::::::::::::::.:::: gi|263 FMTVILVCVSTLAKFVSPMMKSRSHILGTFFAVTLLAIFCKNWDHILCAIERIIIPR 430 440 450 460 470 467 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 22:07:46 2009 done: Tue Mar 3 22:12:26 2009 Total Scan time: 1540.480 Total Display time: 0.180 Function used was FASTA [version 34.26.5 April 26, 2007]