hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-18215851/chunk_1/iprscan-20080501-18215851.nocrc
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Query sequence: KIAA1135
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00750                                                 313.8    1.2e-89   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00750    1/1      73   264 ..     1   242 []   313.8  1.2e-89

Alignments of top-scoring domains:
SM00750: domain 1 of 1, from 73 to 264: score 313.8, E = 1.2e-89
                   *->vSLaeiLevrgrPLsEeEaWAVclqcarsLrevarkaslaaadiegr
                      +SL+eiL+++++P++Ee+aWAVc+qc++sLr++ar++++     ++r
    KIAA1135    73    LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP-----RHR 114  

                   vrltadlllvredGsVsfqepasstpKEqepderafvpPelaqgqsetdl
                   vr++a+++++r dG+V+++++a++++   ep+ +++++++++q++     
    KIAA1135   115 VRSAAQIRVWR-DGAVTLAPAADDAG---EPP-PVAGKLGYSQCM----- 154  

                   sdsSSGDSSvinRAFDnSnHHHHHqHHHPPLvvSeeahvysLGavlyaAl
                                                     e+++++sLG+++y+Al
    KIAA1135   155 ----------------------------------ETEVIESLGIIIYKAL 170  

                   dYglpeneeleLsqpLeslllrMaaddpedrcelesieeaceekedeeae
                   dYgl+enee+eLs+pLe+l+++Ma+++++d++++e++e+a+e+++de+++
    KIAA1135   171 DYGLKENEERELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEK 220  

                   eerravrsleeamkvCrasrllqrreasnhylAvcralfeetlel<-*
                   ++++a+rs++++mk+C a++l+++++a+nhy+Avcralf+et+el   
    KIAA1135   221 RKISAIRSYRDVMKLC-AAHLPTESDAPNHYQAVCRALFAETMEL    264  

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