hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17465941/chunk_1/iprscan-20080501-17465941.nocrc
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Query sequence: KIAA1114
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01454.9.ls MAGE family                                    329.7    4.5e-96   1
PF01454.9.fs MAGE family                                    327.9    1.6e-95   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01454.9.fs   1/1     478   647 ..     1   219 []   327.9  1.6e-95
PF01454.9.ls   1/1     478   647 ..     1   219 []   329.7  4.5e-96

Alignments of top-scoring domains:
PF01454.9.fs: domain 1 of 1, from 478 to 647: score 327.9, E = 1.6e-95
                   *->LVrflLskyqsKespItraeilkiVikeyknhFLpeIfkrAserLel
                      LV++lL+k+q K+ pI+r+++l++Vi+ey ++F peI++rAs++Le+
    KIAA1114   478    LVKYLLVKDQTKI-PIKRSDMLRDVIQEYDEYF-PEIIERASYTLEK 522  

                   vFGleLkEvdpkrrskkatsqsqsssgshsYILvskLplsyrivlflwqs
                    F + LkE+d+                s+ YIL+s+ + s          
    KIAA1114   523 MFRVNLKEIDKQ---------------SSLYILISTQESS---------- 547  

                   sykdgselgddeglPktsesstdtdqlavktGLLmviLgvIfmnGncasE
                       g+ lg+++++P              k+GLLmviL+vIfmnGn+asE
    KIAA1114   548 ---AGI-LGTTKDTP--------------KLGLLMVILSVIFMNGNKASE 579  

                   eeLwefLnrlGlydgeehfifGldprkLitedlVkqkYLveyrqvpnsdP
                   +++we+L++lGl++g +h++fG ++rkLit ++VkqkYL ey++vpns P
    KIAA1114   580 AVIWEVLRKLGLRPGVRHSLFG-EVRKLITDEFVKQKYL-EYKRVPNSRP 627  

                   peyeFlWslGpRAyaEtskmkV<-*
                   peyeF+W  G R+y+EtskmkV   
    KIAA1114   628 PEYEFFW--GLRSYHETSKMKV    647  

PF01454.9.ls: domain 1 of 1, from 478 to 647: score 329.7, E = 4.5e-96
                   *->LVrflLskyqsKespItraeilkiVikeyknhFLpeIfkrAserLel
                      LV++lL+k+q K+ pI+r+++l++Vi+ey ++F peI++rAs++Le+
    KIAA1114   478    LVKYLLVKDQTKI-PIKRSDMLRDVIQEYDEYF-PEIIERASYTLEK 522  

                   vFGleLkEvdpkrrskkatsqsqsssgshsYILvskLplsyrivlflwqs
                    F + LkE+d+                s+ YIL+s+ + s          
    KIAA1114   523 MFRVNLKEIDKQ---------------SSLYILISTQESS---------- 547  

                   sykdgselgddeglPktsesstdtdqlavktGLLmviLgvIfmnGncasE
                       g+ lg+++++P              k+GLLmviL+vIfmnGn+asE
    KIAA1114   548 ---AGI-LGTTKDTP--------------KLGLLMVILSVIFMNGNKASE 579  

                   eeLwefLnrlGlydgeehfifGldprkLitedlVkqkYLveyrqvpnsdP
                   +++we+L++lGl++g +h++fG ++rkLit ++VkqkYL ey++vpns P
    KIAA1114   580 AVIWEVLRKLGLRPGVRHSLFG-EVRKLITDEFVKQKYL-EYKRVPNSRP 627  

                   peyeFlWslGpRAyaEtskmkV<-*
                   peyeF+W  G R+y+EtskmkV   
    KIAA1114   628 PEYEFFW--GLRSYHETSKMKV    647  

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