hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17263194/chunk_1/iprscan-20080501-17263194.nocrc
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Query sequence: KIAA1102
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00033                                                  63.3    3.1e-14   1
SM00132                                                  43.0    3.9e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00033    1/1      41   142 ..     1   100 []    63.3  3.1e-14
SM00132    1/1    1030  1088 ..     1    52 []    43.0  3.9e-08

Alignments of top-scoring domains:
SM00033: domain 1 of 1, from 41 to 142: score 63.3, E = 3.1e-14
                   *->eeeallrWinsll....kvtnfssdlkDGvvLckLlnslsPagsvdk
                      +  ++ +Wi+ +++++   ++f ++l +G++Lc+Lln+++P g+v+k
    KIAA1102    41    AFSEAQKWIEQVTgrsfGDKDFRTGLENGILLCELLNAIKP-GLVKK 86   

                   kk....rfkkleNinlalsfaeklgafLGvgkvvlfdpeDlvegnenkkl
                   +++ ++++  l+Ni l+l  +++l    G+ + +lfdp+Dl + + n+  
    KIAA1102    87 INrlptPIAGLDNIILFLRGCKEL----GLKESQLFDPSDLQDTS-NRVT 131  

                   ilgviwtLirl<-*
                   ++++ +   ++   
    KIAA1102   132 VKSLDYSRKLK    142  

SM00132: domain 1 of 1, from 1030 to 1088: score 43.0, E = 3.9e-08
                   *->kCagCgkpItg..devlralgkvwHpeCFkCskCkkpLgg.....tf
                       C+ Cg p+  + +++++ l+ ++H +CF+C +Ck +Lg+  +++  
    KIAA1102  1030    LCSSCGLPLGKgaAMIIETLNLYFHIQCFRCGICKGQLGDavsgtDV 1076 

                   fekdgklyCkdc<-*
                     ++g l C dc   
    KIAA1102  1077 RIRNGLLNCNDC    1088 

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