hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17231958/chunk_1/iprscan-20080501-17231958.nocrc
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Query sequence: KIAA1100
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00097.15.fs Zinc finger, C3HC4 type (RING finger)           42.5    1.8e-14   1
PF00097.15.ls Zinc finger, C3HC4 type (RING finger)           44.3    3.9e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00097.15.fs   1/1     392   432 ..     1    50 []    42.5  1.8e-14
PF00097.15.ls   1/1     392   432 ..     1    50 []    44.3  3.9e-10

Alignments of top-scoring domains:
PF00097.15.fs: domain 1 of 1, from 392 to 432: score 42.5, E = 1.8e-14
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C +C+  ++      + +lpC+H      f+ +C+ +wl+  +n+tC
    KIAA1100   392    CVVCFSDFEARQL--LRVLPCNHE-----FHTKCVDKWLK--ANRTC 429  

                   plC<-*
                   p+C   
    KIAA1100   430 PIC    432  

PF00097.15.ls: domain 1 of 1, from 392 to 432: score 44.3, E = 3.9e-10
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C +C+  ++      + +lpC+H      f+ +C+ +wl+  +n+tC
    KIAA1100   392    CVVCFSDFEARQL--LRVLPCNHE-----FHTKCVDKWLK--ANRTC 429  

                   plC<-*
                   p+C   
    KIAA1100   430 PIC    432  

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