# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hk07907.fasta.nr -Q ../query/KIAA1100.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1100, 444 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7803689 sequences Expectation_n fit: rho(ln(x))= 6.6024+/-0.000211; mu= 5.5699+/- 0.012 mean_var=151.2129+/-28.259, 0's: 34 Z-trim: 83 B-trim: 0 in 0/67 Lambda= 0.104299 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|109079877|ref|XP_001091221.1| PREDICTED: simila ( 983) 3177 489.9 1.1e-135 gi|74758994|sp|Q7L0R7.1|RNF44_HUMAN RecName: Full= ( 432) 3131 482.6 7.7e-134 gi|114603535|ref|XP_001136577.1| PREDICTED: ring f ( 430) 3097 477.5 2.7e-132 gi|149726055|ref|XP_001502682.1| PREDICTED: simila ( 432) 2978 459.6 6.6e-127 gi|73953315|ref|XP_546217.2| PREDICTED: similar to ( 431) 2969 458.3 1.7e-126 gi|194668435|ref|XP_610473.4| PREDICTED: similar t ( 432) 2918 450.6 3.4e-124 gi|52545897|emb|CAD39147.2| hypothetical protein [ ( 354) 2556 396.0 7.5e-108 gi|194379472|dbj|BAG63702.1| unnamed protein produ ( 351) 2534 392.7 7.4e-107 gi|114603537|ref|XP_530875.2| PREDICTED: ring fing ( 350) 2517 390.2 4.3e-106 gi|123784632|sp|Q3UHJ8.1|RNF44_MOUSE RecName: Full ( 407) 2504 388.3 1.9e-105 gi|73953313|ref|XP_865983.1| PREDICTED: similar to ( 351) 2491 386.2 6.5e-105 gi|74213634|dbj|BAE35621.1| unnamed protein produc ( 350) 2413 374.5 2.2e-101 gi|81908627|sp|Q4V7B8.1|RNF44_RAT RecName: Full=RI ( 350) 2408 373.8 3.7e-101 gi|74179060|dbj|BAE42740.1| unnamed protein produc ( 351) 2401 372.7 7.8e-101 gi|17160934|gb|AAH17630.1| Ring finger protein 44 ( 339) 2334 362.6 8.2e-98 gi|47211404|emb|CAF94220.1| unnamed protein produc ( 428) 2098 327.2 4.7e-87 gi|119605476|gb|EAW85070.1| ring finger protein 44 ( 408) 1962 306.7 6.6e-81 gi|123908298|sp|Q08CG8.1|RNF44_DANRE RecName: Full ( 448) 1930 301.9 2e-79 gi|38173739|gb|AAH60730.1| Ring finger protein 38 ( 464) 1872 293.2 8.6e-77 gi|148670480|gb|EDL02427.1| ring finger protein 38 ( 465) 1872 293.2 8.7e-77 gi|56749656|sp|Q8BI21|RNF38_MOUSE RING finger prot ( 518) 1872 293.3 9.3e-77 gi|73971371|ref|XP_866934.1| PREDICTED: similar to ( 462) 1871 293.1 9.6e-77 gi|57093703|ref|XP_531997.1| PREDICTED: similar to ( 512) 1871 293.1 1e-76 gi|73971359|ref|XP_866867.1| PREDICTED: similar to ( 514) 1871 293.1 1e-76 gi|54673576|gb|AAH33786.2| Ring finger protein 38 ( 465) 1867 292.5 1.5e-76 gi|56749664|sp|Q9H0F5.4|RNF38_HUMAN RecName: Full= ( 515) 1867 292.5 1.6e-76 gi|114624653|ref|XP_528602.2| PREDICTED: ring fing ( 589) 1867 292.6 1.7e-76 gi|109110995|ref|XP_001082059.1| PREDICTED: simila ( 612) 1867 292.6 1.8e-76 gi|149739190|ref|XP_001504372.1| PREDICTED: ring f ( 467) 1865 292.2 1.8e-76 gi|149739188|ref|XP_001504371.1| PREDICTED: ring f ( 517) 1865 292.2 1.9e-76 gi|50949355|emb|CAB66751.3| hypothetical protein [ ( 515) 1862 291.8 2.6e-76 gi|71896429|ref|NP_001025505.1| ring finger protei ( 464) 1860 291.4 3e-76 gi|126334064|ref|XP_001371090.1| PREDICTED: simila ( 520) 1860 291.5 3.3e-76 gi|74188535|dbj|BAE28022.1| unnamed protein produc ( 432) 1841 288.5 2.1e-75 gi|73971357|ref|XP_866858.1| PREDICTED: similar to ( 432) 1840 288.4 2.3e-75 gi|21666412|gb|AAM73697.1|AF394047_1 RING finger p ( 432) 1836 287.8 3.5e-75 gi|53733396|gb|AAH83548.1| Rnf38 protein [Rattus n ( 432) 1830 286.9 6.6e-75 gi|89272082|emb|CAJ81331.1| ring finger protein 38 ( 432) 1829 286.7 7.3e-75 gi|74355024|gb|AAI02725.1| Ring finger protein 38 ( 432) 1826 286.3 1e-74 gi|19423292|gb|AAL88459.1|AF480444_1 RING finger p ( 432) 1822 285.7 1.5e-74 gi|118104283|ref|XP_424864.2| PREDICTED: similar t ( 546) 1790 281.0 5e-73 gi|149568981|ref|XP_001517302.1| PREDICTED: simila ( 460) 1771 278.0 3.2e-72 gi|55663446|emb|CAH70194.1| ring finger protein 38 ( 439) 1757 275.9 1.3e-71 gi|73971367|ref|XP_866906.1| PREDICTED: similar to ( 517) 1753 275.4 2.3e-71 gi|193787520|dbj|BAG52726.1| unnamed protein produ ( 439) 1748 274.5 3.4e-71 gi|120577569|gb|AAI30125.1| LOC100037019 protein [ ( 496) 1713 269.3 1.4e-69 gi|169641968|gb|AAI60676.1| Unknown (protein for I ( 508) 1713 269.3 1.5e-69 gi|10437428|dbj|BAB15050.1| unnamed protein produc ( 332) 1671 262.8 8.7e-68 gi|189514564|ref|XP_695200.3| PREDICTED: unc-45 ho ( 779) 1382 219.7 1.9e-54 gi|148670481|gb|EDL02428.1| ring finger protein 38 ( 434) 1251 199.8 1.1e-48 >>gi|109079877|ref|XP_001091221.1| PREDICTED: similar to (983 aa) initn: 3177 init1: 3177 opt: 3177 Z-score: 2592.1 bits: 489.9 E(): 1.1e-135 Smith-Waterman score: 3177; 98.649% identity (99.550% similar) in 444 aa overlap (1-444:540-983) 10 20 30 KIAA11 VPAQPLHPPAPPMRPWALAVTRWPPSAPVG ::::::::::: :::::::::::::::::: gi|109 SLPDWVASDLCDWLCSVHIYPIRPALSWTQVPAQPLHPPAPLMRPWALAVTRWPPSAPVG 510 520 530 540 550 560 40 50 60 70 80 90 KIAA11 QRRFSAGPGSTPGQLWGSPGLEGPLASPPARDERLPSQQPPSRPPHLPVEERRASAPAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QRRFSAGPGSTPGQLWGSPGLEGPLASPPARDERLPSQQPPSRPPHLPVEERRASAPAGG 570 580 590 600 610 620 100 110 120 130 140 150 KIAA11 SPRMLHPATQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPAC .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GPRMLHPATQQSPFMVDLHEQVHQGPVPLSYTVTTVTTQGFPLPTGQHIPGCSAQQLPAC 630 640 650 660 670 680 160 170 180 190 200 210 KIAA11 SVMFSGQHYPLCCLPPPLIQACTMQQLPVPYQAYPHLISSDHYILHPPPPAPPPQPTHMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SVMFSGQHYPLCCLPPPLIQACTMQQLPVPYQAYPHLISSDHYILHPPPPAPPPQPTHMA 690 700 710 720 730 740 220 230 240 250 260 270 KIAA11 PLGQFVSLQTQHPRMPLQRLDNDVDLRGDQPSLGSFTYSTSAPGPALSPSVPLHYLPHDP :::::::::.:::::::::::::::::::: ::::::::::::::::::::::::::::: gi|109 PLGQFVSLQAQHPRMPLQRLDNDVDLRGDQHSLGSFTYSTSAPGPALSPSVPLHYLPHDP 750 760 770 780 790 800 280 290 300 310 320 330 KIAA11 LHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTA 810 820 830 840 850 860 340 350 360 370 380 390 KIAA11 MGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQT ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|109 MGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSRQSEQT 870 880 890 900 910 920 400 410 420 430 440 KIAA11 LCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASEVPREAE ::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|109 LCVVCFSDFETRQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASEVPREAE 930 940 950 960 970 980 >>gi|74758994|sp|Q7L0R7.1|RNF44_HUMAN RecName: Full=RING (432 aa) initn: 3131 init1: 3131 opt: 3131 Z-score: 2559.1 bits: 482.6 E(): 7.7e-134 Smith-Waterman score: 3131; 100.000% identity (100.000% similar) in 432 aa overlap (13-444:1-432) 10 20 30 40 50 60 KIAA11 VPAQPLHPPAPPMRPWALAVTRWPPSAPVGQRRFSAGPGSTPGQLWGSPGLEGPLASPPA :::::::::::::::::::::::::::::::::::::::::::::::: gi|747 MRPWALAVTRWPPSAPVGQRRFSAGPGSTPGQLWGSPGLEGPLASPPA 10 20 30 40 70 80 90 100 110 120 KIAA11 RDERLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQGPVPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 RDERLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQGPVPLS 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 YTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 YTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 YQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 YQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQ 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 PSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 PSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPL 230 240 250 260 270 280 310 320 330 340 350 360 KIAA11 PPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 PPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA11 DAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 DAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVD 350 360 370 380 390 400 430 440 KIAA11 KWLKANRTCPICRADASEVPREAE :::::::::::::::::::::::: gi|747 KWLKANRTCPICRADASEVPREAE 410 420 430 >>gi|114603535|ref|XP_001136577.1| PREDICTED: ring finge (430 aa) initn: 2155 init1: 1980 opt: 3097 Z-score: 2531.4 bits: 477.5 E(): 2.7e-132 Smith-Waterman score: 3097; 99.537% identity (99.537% similar) in 432 aa overlap (13-444:1-430) 10 20 30 40 50 60 KIAA11 VPAQPLHPPAPPMRPWALAVTRWPPSAPVGQRRFSAGPGSTPGQLWGSPGLEGPLASPPA :::::: ::::::::::::::::::::::::::::::::::::::::: gi|114 MRPWAL-VTRWPPSAPVGQRRFSAGPGSTPGQLWGSPGLEGPLASPPA 10 20 30 40 70 80 90 100 110 120 KIAA11 RDERLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQGPVPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RDERLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQGPVPLS 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 YTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 YQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQ 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 PSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPL :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|114 PSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFG-PYSHMMPRRLSTQRYRLQQPL 230 240 250 260 270 280 310 320 330 340 350 360 KIAA11 PPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA11 DAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVD 350 360 370 380 390 400 430 440 KIAA11 KWLKANRTCPICRADASEVPREAE :::::::::::::::::::::::: gi|114 KWLKANRTCPICRADASEVPREAE 410 420 430 >>gi|149726055|ref|XP_001502682.1| PREDICTED: similar to (432 aa) initn: 2978 init1: 2978 opt: 2978 Z-score: 2434.6 bits: 459.6 E(): 6.6e-127 Smith-Waterman score: 2978; 95.370% identity (97.917% similar) in 432 aa overlap (13-444:1-432) 10 20 30 40 50 60 KIAA11 VPAQPLHPPAPPMRPWALAVTRWPPSAPVGQRRFSAGPGSTPGQLWGSPGLEGPLASPPA ::::::::::::::::.:: ::::: .:::::: :::: :::::.::: gi|149 MRPWALAVTRWPPSAPAGQWRFSAGASSTPGQLRGSPGREGPLAGPPA 10 20 30 40 70 80 90 100 110 120 KIAA11 RDERLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQGPVPLS .::::::::: ::::::::::::::::::::::::::.::::::::::::::::::::: gi|149 QDERLPSQQPLPRPPHLPVEERRASAPAGGSPRMLHPASQQSPFMVDLHEQVHQGPVPLS 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 YTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|149 YTVTTVTTQGFPLPTSQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 YQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQ :::::::::::::.:::::::: :::.::::::::::::::::::::::::::::::::: gi|149 YQAYPHLISSDHYVLHPPPPAPHPQPAHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQ 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 PSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPL ::::::::::::::::::::::::::::::::::::.::::::::::.:::::::::: gi|149 HPLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGMPYSHMMPRRLGTQRYRLQQPL 230 240 250 260 270 280 310 320 330 340 350 360 KIAA11 PPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLG ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|149 PPPPPPPPPPPYYPSFLPYFLSMLPMSPTAVGPTISLDLDVDDVEMENYEALLNLAERLG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA11 DAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVD 350 360 370 380 390 400 430 440 KIAA11 KWLKANRTCPICRADASEVPREAE :::::::::::::::::::::::: gi|149 KWLKANRTCPICRADASEVPREAE 410 420 430 >>gi|73953315|ref|XP_546217.2| PREDICTED: similar to rin (431 aa) initn: 2607 init1: 2607 opt: 2969 Z-score: 2427.3 bits: 458.3 E(): 1.7e-126 Smith-Waterman score: 2969; 96.065% identity (97.685% similar) in 432 aa overlap (13-444:1-431) 10 20 30 40 50 60 KIAA11 VPAQPLHPPAPPMRPWALAVTRWPPSAPVGQRRFSAGPGSTPGQLWGSPGLEGPLASPPA :::::::::::::::::::::::.::::::::: :::. :::::: :: gi|739 MRPWALAVTRWPPSAPVGQRRFSVGPGSTPGQLRGSPSREGPLASLPA 10 20 30 40 70 80 90 100 110 120 KIAA11 RDERLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQGPVPLS .::::::::: :: ::::::.::::::: ::::::::.::::::::::::::::::::: gi|739 QDERLPSQQPLPRP-HLPVEEHRASAPAGRSPRMLHPASQQSPFMVDLHEQVHQGPVPLS 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 YTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 YQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQ :::::::::::::::::::::: :::.::::::::::::.:::::::::::::::::::: gi|739 YQAYPHLISSDHYILHPPPPAPHPQPAHMAPLGQFVSLQAQHPRMPLQRLDNDVDLRGDQ 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 PSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HPLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPL 230 240 250 260 270 280 310 320 330 340 350 360 KIAA11 PPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA11 DAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVD 350 360 370 380 390 400 430 440 KIAA11 KWLKANRTCPICRADASEVPREAE :::::::::::::::::::::::: gi|739 KWLKANRTCPICRADASEVPREAE 410 420 430 >>gi|194668435|ref|XP_610473.4| PREDICTED: similar to RI (432 aa) initn: 2918 init1: 2918 opt: 2918 Z-score: 2385.9 bits: 450.6 E(): 3.4e-124 Smith-Waterman score: 2918; 93.287% identity (96.991% similar) in 432 aa overlap (13-444:1-432) 10 20 30 40 50 60 KIAA11 VPAQPLHPPAPPMRPWALAVTRWPPSAPVGQRRFSAGPGSTPGQLWGSPGLEGPLASPPA :.::::::::: :::: ::::: :::.:.::::::::. :::::: :: gi|194 MQPWALAVTRWAPSAPGGQRRFPAGPSSSPGQLWGSPSHEGPLASLPA 10 20 30 40 70 80 90 100 110 120 KIAA11 RDERLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQGPVPLS .:::.:::: : :: ::::::::::::::::::::::..::::::::::::::::::::: gi|194 QDERFPSQQLPPRPAHLPVEERRASAPAGGSPRMLHPVSQQSPFMVDLHEQVHQGPVPLS 50 60 70 80 90 100 130 140 150 160 170 180 KIAA11 YTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|194 YTVTTVTTQGFPLPAGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP 110 120 130 140 150 160 190 200 210 220 230 240 KIAA11 YQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQ :::::::::::::::::::::: :::.::::::::.:::::::::::::::::::::::: gi|194 YQAYPHLISSDHYILHPPPPAPHPQPAHMAPLGQFMSLQTQHPRMPLQRLDNDVDLRGDQ 170 180 190 200 210 220 250 260 270 280 290 300 KIAA11 PSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPL :::::::::::::.:: :::.:::::: ::.::::::::::.:::::::::::::::: gi|194 HPLGSFTYSTSAPGPTLSASVPMHYLPHDTLHHELSFGVPYSHVMPRRLSTQRYRLQQPL 230 240 250 260 270 280 310 320 330 340 350 360 KIAA11 PPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLG 290 300 310 320 330 340 370 380 390 400 410 420 KIAA11 DAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVD ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|194 DAKPRGLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVD 350 360 370 380 390 400 430 440 KIAA11 KWLKANRTCPICRADASEVPREAE :::::::::::::::::::::::: gi|194 KWLKANRTCPICRADASEVPREAE 410 420 430 >>gi|52545897|emb|CAD39147.2| hypothetical protein [Homo (354 aa) initn: 2556 init1: 2556 opt: 2556 Z-score: 2092.5 bits: 396.0 E(): 7.5e-108 Smith-Waterman score: 2556; 100.000% identity (100.000% similar) in 354 aa overlap (91-444:1-354) 70 80 90 100 110 120 KIAA11 RDERLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQGPVPLS :::::::::::::::::::::::::::::: gi|525 SPRMLHPATQQSPFMVDLHEQVHQGPVPLS 10 20 30 130 140 150 160 170 180 KIAA11 YTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 YTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVP 40 50 60 70 80 90 190 200 210 220 230 240 KIAA11 YQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 YQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQ 100 110 120 130 140 150 250 260 270 280 290 300 KIAA11 PSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 PSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPL 160 170 180 190 200 210 310 320 330 340 350 360 KIAA11 PPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 PPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLG 220 230 240 250 260 270 370 380 390 400 410 420 KIAA11 DAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 DAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVD 280 290 300 310 320 330 430 440 KIAA11 KWLKANRTCPICRADASEVPREAE :::::::::::::::::::::::: gi|525 KWLKANRTCPICRADASEVPREAE 340 350 >>gi|194379472|dbj|BAG63702.1| unnamed protein product [ (351 aa) initn: 2534 init1: 2534 opt: 2534 Z-score: 2074.7 bits: 392.7 E(): 7.4e-107 Smith-Waterman score: 2534; 100.000% identity (100.000% similar) in 351 aa overlap (94-444:1-351) 70 80 90 100 110 120 KIAA11 RLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQGPVPLSYTV :::::::::::::::::::::::::::::: gi|194 MLHPATQQSPFMVDLHEQVHQGPVPLSYTV 10 20 30 130 140 150 160 170 180 KIAA11 TTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVPYQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVPYQA 40 50 60 70 80 90 190 200 210 220 230 240 KIAA11 YPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQPSL 100 110 120 130 140 150 250 260 270 280 290 300 KIAA11 GSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPP 160 170 180 190 200 210 310 320 330 340 350 360 KIAA11 PPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAK 220 230 240 250 260 270 370 380 390 400 410 420 KIAA11 PRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWL 280 290 300 310 320 330 430 440 KIAA11 KANRTCPICRADASEVPREAE ::::::::::::::::::::: gi|194 KANRTCPICRADASEVPREAE 340 350 >>gi|114603537|ref|XP_530875.2| PREDICTED: ring finger p (350 aa) initn: 1612 init1: 1437 opt: 2517 Z-score: 2060.9 bits: 390.2 E(): 4.3e-106 Smith-Waterman score: 2517; 99.715% identity (99.715% similar) in 351 aa overlap (94-444:1-350) 70 80 90 100 110 120 KIAA11 RLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQGPVPLSYTV :::::::::::::::::::::::::::::: gi|114 MLHPATQQSPFMVDLHEQVHQGPVPLSYTV 10 20 30 130 140 150 160 170 180 KIAA11 TTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVPYQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVPYQA 40 50 60 70 80 90 190 200 210 220 230 240 KIAA11 YPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQPSL 100 110 120 130 140 150 250 260 270 280 290 300 KIAA11 GSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPP ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: gi|114 GSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFG-PYSHMMPRRLSTQRYRLQQPLPPP 160 170 180 190 200 310 320 330 340 350 360 KIAA11 PPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAK 210 220 230 240 250 260 370 380 390 400 410 420 KIAA11 PRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWL 270 280 290 300 310 320 430 440 KIAA11 KANRTCPICRADASEVPREAE ::::::::::::::::::::: gi|114 KANRTCPICRADASEVPREAE 330 340 350 >>gi|123784632|sp|Q3UHJ8.1|RNF44_MOUSE RecName: Full=RIN (407 aa) initn: 1503 init1: 1503 opt: 2504 Z-score: 2049.5 bits: 388.3 E(): 1.9e-105 Smith-Waterman score: 2635; 87.067% identity (90.993% similar) in 433 aa overlap (13-444:1-407) 10 20 30 40 50 60 KIAA11 VPAQPLHPPAPPMRPWALAVTRWPPSAPVGQRRFSAGPGSTPGQLWGSPGLEGPLASPPA ::::.::::.::::::::. : :. .:.:::::: gi|123 MRPWTLAVTKWPPSAPVGHWRVSTRLSSSPGQLWG------------- 10 20 30 70 80 90 100 110 120 KIAA11 RDERLPSQQPPSRPPHLPVEERRASAPAGGSPRMLHPATQQSPFMVDLHEQVHQGPVPLS :: .: :::.::::::: :::::::::::::::::::::::::::::: gi|123 ------------RPSNLSVEEHRASAPAGRSPRMLHPATQQSPFMVDLHEQVHQGPVPLS 40 50 60 70 80 130 140 150 160 170 KIAA11 YTVTTVTTQGFPLPTGQHIPGCSAQQLPACSVMFSGQHYPLCCLPPP-LIQACTMQQLPV :::::::::::::::.::::::::::::::::::::::::::::::: ::::::::::: gi|123 YTVTTVTTQGFPLPTSQHIPGCSAQQLPACSVMFSGQHYPLCCLPPPQLIQACTMQQLPG 90 100 110 120 130 140 180 190 200 210 220 230 KIAA11 PYQAYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGD ::..:::::::::::::::::::::::::::::::::::::::::::::::::..::::: gi|123 PYHTYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNEMDLRGD 150 160 170 180 190 200 240 250 260 270 280 290 KIAA11 QPSLGSFTYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQP : :::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|123 QHPLGSFTYSTSATGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQP 210 220 230 240 250 260 300 310 320 330 340 350 KIAA11 LPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERL :::::::::: ::::::::::::::::::..:::::::::::::::::::::::::::: gi|123 LPPPPPPPPPS-YYPSFLPYFLSMLPMSPTTVGPTISLDLDVDDVEMENYEALLNLAERL 270 280 290 300 310 320 360 370 380 390 400 410 KIAA11 GDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCV :::::::::::::::::::::::::::::::::::::::::.::::::::::::::.::: gi|123 GDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCV 330 340 350 360 370 380 420 430 440 KIAA11 DKWLKANRTCPICRADASEVPREAE ::::::::::::::::::::::::: gi|123 DKWLKANRTCPICRADASEVPREAE 390 400 444 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 19:02:19 2009 done: Tue Mar 3 19:06:37 2009 Total Scan time: 1469.610 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]