hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17080478/chunk_1/iprscan-20080501-17080478.nocrc
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Query sequence: KIAA1091
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00799                                                 286.3    2.3e-81   1
SM00800                                                 169.1    4.5e-46   1
SM00593                                                 160.5    1.7e-43   2
SM00801                                                  89.3    4.6e-22   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00800     1/1      84   210 ..     1   114 []   169.1  4.5e-46
SM00799     1/1     274   462 ..     1   204 []   286.3  2.3e-81
SM00801     1/1     584   660 ..     1    84 []    89.3  4.6e-22
SM00593     1/2     956  1019 ..     1    68 []    89.3  4.6e-22
SM00593     2/2    1290  1350 ..     1    68 []    71.2  1.3e-16

Alignments of top-scoring domains:
SM00800: domain 1 of 1, from 84 to 210: score 169.1, E = 4.5e-46
                   *->pgrLfdyfvvvgldkskglepdelsalyql.eap...g........r
                      p+r++dyfv++gld+++glepdelsal+q+ +a++ +++ ++  +++
    KIAA1091    84    PSRFADYFVICGLDTETGLEPDELSALCQYiQASkarDgaspfissT 130  

                   t.Ge.f.q.plgrsykPeildryPekdfedfplpdsvpmFCFPeGidiet
                   t+Ge+f+q+pl+r++k+++l ryPe+ +++++++d+v m+C+P+G+ + t
    KIAA1091   131 TeGEnFeQtPLRRTFKSKVLARYPENVEWNPFDQDAVGMLCMPKGLAFKT 180  

                   wprstsspdpqfFsFVLTdedGsrrYGfCrrfy<-*
                      + ++++pqf+ F++T+edGsr++Gf+++fy   
    KIAA1091   181 ---QADPREPQFHAFIITREDGSRTFGFALTFY    210  

SM00799: domain 1 of 1, from 274 to 462: score 286.3, E = 2.3e-81
                   *->yapkcisCilSrlpffelFrkfLnelyrllasdsssellleellisl
                      y++kci C++++  f+ ++r +L++l++ + s+++++l+le  +i++
    KIAA1091   274    YVSKCI-CLITPMSFMKACRSVLQQLHQAVTSPQPPPLPLE-SYIYN 318  

                   llspvPlPppggslvlsslsSyvslgppgdlvvpielqrPddselplide
                    l++vPlPppg+sl++           +g +  pi++qrP ++elpl+d 
    KIAA1091   319 VLYEVPLPPPGRSLKF-----------SGVYG-PIICQRPSTNELPLFD- 355  

                   nfdlheLfecLgvenvlqLfaslLlErrIifvSsnlstLsavieallaLL
                    f++ e+fe+Lgvenv+qLf+++LlE +I+++S+++++L++v+e+++aL+
    KIAA1091   356 -FPVKEVFELLGVENVFQLFTCALLEFQILLYSQHYQRLMTVAETITALM 404  

                   yPFvWQhvyIPiLPasLldvLsAPtPFiiGvhssffeevkeepdeedd.v
                   +PF+WQhvy+PiLPasLl++L+AP+P+++G+hs+ +++++++++++++++
    KIAA1091   405 FPFQWQHVYVPILPASLLHFLDAPVPYLMGLHSNGLDDRSKLELPQEAnL 454  

                   vvVDLDtg<-*
                   ++VD+D++   
    KIAA1091   455 CFVDIDNH    462  

SM00801: domain 1 of 1, from 584 to 660: score 89.3, E = 4.6e-22
                   *->lndeireaaFlrffnsaqllggllYrnflrkhpitdaptwrkepgpv
                      ln +ire +F ++f  +q++ +  Y+ f++ +p +d+++w +++++ 
    KIAA1091   584    LNIQIRE-VFANRF--TQMFAD--YEVFVI-QPSQDKESWFTNREQM 624  

                   isFdkesFlksrpsselrpFlkkfletQmFsqFIeer<-*
                     Fdk+sFl+++p+ +  pFl++fletQmF+ FI+++   
    KIAA1091   625 QNFDKASFLSDQPEPY-LPFLSRFLETQMFASFIDNK    660  

SM00593: domain 1 of 2, from 956 to 1019: score 89.3, E = 4.6e-22
                   *->frAwirlaLneklLsswLnlLlsdrkllskyYepwAflrsaeadpee
                      +rAw+rl++++klLs++L+ Llsd++l++k+Y+++Aflr+    ++e
    KIAA1091   956    ARAWVRLSMEKKLLSRHLKQLLSDHELTKKLYKRYAFLRC----DDE 998  

                   geqlltlLqgLsaldfnlpvd<-*
                   +eq+l++L++ +a+d++++++   
    KIAA1091   999 KEQFLYHLLSFNAVDYFCFTN    1019 

SM00593: domain 2 of 2, from 1290 to 1350: score 71.2, E = 1.3e-16
                   *->frAwirlaLneklLsswLnlLlsdrkllskyYepwAflrsaeadpee
                      f+++++l+ +++lL++w+ +Ll+d+++++++Ye+ A++ +    +++
    KIAA1091  1290    FQMLVCLGARDHLLHHWI-ALLADCPITAHMYEDVALIKD----HTL 1331 

                   geqlltlLqgLsaldfnlpvd<-*
                    ++l++ Lq+L   +fn++++   
    KIAA1091  1332 VNSLIRVLQTL--QEFNITLE    1350 

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