hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17043572/chunk_1/iprscan-20080501-17043572.nocrc
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Query sequence: KIAA1089
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00670                                                  68.9    6.2e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00670    1/1     872   995 ..     1   146 []    68.9  6.2e-16

Alignments of top-scoring domains:
SM00670: domain 1 of 1, from 872 to 995: score 68.9, E = 6.2e-16
                   *->mkvvlDTnvlidgllardaleklle..kgevyipptVleEleylakg
                       ++v+DT +l ++l    ++++l+ +++++v+ip+tV++ l+ l+  
    KIAA1089   872    PYLVPDTQALCHHL---PVIRQLATsgRFIVIIPRTVIDGLDLLK-- 913  

                   ifgke.gekaleslkkleelalegkikleilleerksilyvLdylvllla
                       +++  a++ +++le ++++g++ ++ ++e++ks             
    KIAA1089   914 ----KeHPGARDGIRYLEAEFKKGNRYIRCQKEVGKS------------- 946  

                   tleeeelerlslkketeiyynllpnDalilatAkelge.......rnvvL
                    +e+++l+r + +++t           +il+++k+l   ++ +++++  +
    KIAA1089   947 -FERHKLKRQDADAWT---------LYKILDSCKQLTLaqgageeDPSGM 986  

                   vTnDrdlrr<-*
                   vT   +l     
    KIAA1089   987 VTIITGLPL    995  

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