hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16592890/chunk_1/iprscan-20080501-16592890.nocrc
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Query sequence: KIAA1086
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07528.4.fs DZF                                            290.2    2.2e-92   1
PF07528.4.ls DZF                                            292.2    9.2e-85   1
PF00096.16.ls Zinc finger, C2H2 type                          24.7    0.00031   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07528.4.fs   1/1     621   867 ..     1   261 []   290.2  2.2e-92
PF07528.4.ls   1/1     621   867 ..     1   261 []   292.2  9.2e-85

Alignments of top-scoring domains:
PF07528.4.fs: domain 1 of 1, from 621 to 867: score 290.2, E = 2.2e-92
                   *->rVGsfaKGTllkGdnvadvVlilktlPTselvealarkveedltsLt
                      rVG+ aKG+ll Gd+   + l+++++PT  l+  +a  +  +l    
    KIAA1086   621    RVGILAKGLLLRGDRNVRLALLCSEKPTHSLLRRIAQQLPRQLQ--M 665  

                   vepdkYEileSvDealiviknykepqmelgilITSavvrkvrllIvllPe
                   v++d YE+   + ea ivi    ep m  +i +TS++ r ++ +    + 
    KIAA1086   666 VTEDEYEVSSDP-EANIVISSCEEPRMQVTISVTSPLMR-EDPSTD-PGV 712  

                   nlrklEpelhLDkklclsaLASiRHtkWFeenahhLkPaFiqscqvlIRv
                   +    + +++L  k+cl  LA++RH++WF+++a++L     q c+++IRv
    KIAA1086   713 EEPQADAGDVLSPKKCLESLAALRHARWFQARASGL-----QPCVIVIRV 757  

                   LkDLrrRypefaPLsdWkleLLahkaImNnpsrqalglgeAFRRvfelLA
                   L+DL+rR+p+++ L +W +eLL++ka+   ++  +lg g+A RRv+e+ A
    KIAA1086   758 LRDLCRRVPTWGALPAWAMELLVEKAVS--SAAGPLGPGDAVRRVLECVA 805  

                   SGiflPgSagitDPcEkghtrvltaLTleQqdsvcmtAQtlvRvlAfGnD
                    G +l +++g+ DPcE  +t++l  +Tl+ +++v+++AQ+++R+lAf   
    KIAA1086   806 TGTLLTDGPGLQDPCERDQTDALEPMTLQEREDVTASAQHALRMLAFR-- 853  

                   gyhkILGldgltsv<-*
                   + hk+LG+d l+     
    KIAA1086   854 QTHKVLGMDLLPPR    867  

PF07528.4.ls: domain 1 of 1, from 621 to 867: score 292.2, E = 9.2e-85
                   *->rVGsfaKGTllkGdnvadvVlilktlPTselvealarkveedltsLt
                      rVG+ aKG+ll Gd+   + l+++++PT  l+  +a  +  +l    
    KIAA1086   621    RVGILAKGLLLRGDRNVRLALLCSEKPTHSLLRRIAQQLPRQLQ--M 665  

                   vepdkYEileSvDealiviknykepqmelgilITSavvrkvrllIvllPe
                   v++d YE+   + ea ivi    ep m  +i +TS++ r ++ +    + 
    KIAA1086   666 VTEDEYEVSSDP-EANIVISSCEEPRMQVTISVTSPLMR-EDPSTD-PGV 712  

                   nlrklEpelhLDkklclsaLASiRHtkWFeenahhLkPaFiqscqvlIRv
                   +    + +++L  k+cl  LA++RH++WF+++a++L     q c+++IRv
    KIAA1086   713 EEPQADAGDVLSPKKCLESLAALRHARWFQARASGL-----QPCVIVIRV 757  

                   LkDLrrRypefaPLsdWkleLLahkaImNnpsrqalglgeAFRRvfelLA
                   L+DL+rR+p+++ L +W +eLL++ka+   ++  +lg g+A RRv+e+ A
    KIAA1086   758 LRDLCRRVPTWGALPAWAMELLVEKAVS--SAAGPLGPGDAVRRVLECVA 805  

                   SGiflPgSagitDPcEkghtrvltaLTleQqdsvcmtAQtlvRvlAfGnD
                    G +l +++g+ DPcE  +t++l  +Tl+ +++v+++AQ+++R+lAf   
    KIAA1086   806 TGTLLTDGPGLQDPCERDQTDALEPMTLQEREDVTASAQHALRMLAFR-- 853  

                   gyhkILGldgltsv<-*
                   + hk+LG+d l+     
    KIAA1086   854 QTHKVLGMDLLPPR    867  

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