hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16422606/chunk_1/iprscan-20080501-16422606.nocrc
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Query sequence: KIAA1076
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00317                                                 135.2      7e-36   1
SM00508                                                  35.6    6.5e-06   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00317     1/1     665   788 ..     1   114 []   135.2    7e-36
SM00508     1/1     788   804 .]     1    17 []    35.6  6.5e-06

Alignments of top-scoring domains:
SM00317: domain 1 of 1, from 665 to 788: score 135.2, E = 7e-36
                   *->aklevfkskgkGwGlratedIpkGefIleyvGeii............
                      +kl+  ks ++ wGl+a+e+I+++e+++eyvG  i++   + ++++ 
    KIAA1076   665    KKLKFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIrqviadmrekry 711  

                   .......fylfd.....ciDatranggkGniarfiNHSCePNcelifvev
                   ++++ +++y+f+ ++++ iDat+     Gn+arfiNHSC+PNc+++++ v
    KIAA1076   712 edegigsSYMFRvdhdtIIDATK----CGNFARFINHSCNPNCYAKVITV 757  

                   dgfdprgasdsadprivifAlrdIkpGEELtidYgddyege<-*
                   +            ++ivi+++++I  +EE+t+dY++  e+    
    KIAA1076   758 ES----------QKKIVIYSKQHINVNEEITYDYKFPIEDV    788  

SM00508: domain 1 of 1, from 788 to 804: score 35.6, E = 6.5e-06
                   *->kkqpClCGaanCrGfLg<-*
                      +k+pClCG++nCrG+L+   
    KIAA1076   788    VKIPCLCGSENCRGTLN    804  

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