hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-16323182/chunk_1/iprscan-20080501-16323182.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1070 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00135.18.ls Carboxylesterase 715.9 2.5e-212 1 PF00135.18.fs Carboxylesterase 713.9 1e-211 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00135.18.fs 1/1 36 609 .. 1 592 [] 713.9 1e-211 PF00135.18.ls 1/1 36 609 .. 1 592 [] 715.9 2.5e-212 Alignments of top-scoring domains: PF00135.18.fs: domain 1 of 1, from 36 to 609: score 713.9, E = 1e-211 *->mllllllllllllflavvataptspedpvVeTsyvgGkvrGlrvkvd ml++ll+ ++l+ ++ V+T+ Gk+rG++ + + KIAA1070 36 MLGCLLQAGHVLSQKLDDVDP-------LVATNF--GKIRGIKKELN 73 g.gnkpvyaFlGIPYAkPPvGeLRFkkPqPpepWtgvldATkygpaCpQ. +++ +pv +FlG+PYA+PP+Ge+RF++P+Pp+pW+++++AT+++p+CpQ+ KIAA1070 74 NeILGPVIQFLGVPYAAPPTGERRFQPPEPPSPWSDIRNATQFAPVCPQn 123 ndlgfpgfslal.hv.gsemwnkntg......ksmSEDCLYLNVytPkla + g +l++v ++ +++ n+ ++ +++SEDCLYLN+y+P+ + KIAA1070 124 IIDG------RLpEVmLPVWFTNNLDvvssyvQDQSEDCLYLNIYVPTED 167 senk...klPVmVwIHGGGFqsGsassvslddydgpdlaasedVVVVtiN + ++++++ PVmV+IHGG +++G++ ++ydg++la++++V+V+t+N KIAA1070 168 DIRDsggPKPVMVYIHGGSYMEGTG-----NLYDGSVLASYGNVIVITVN 212 YRLGalGFLstgdselppppGNaGLlDQvlALrWVqeNIaaFGGDPdnVT YRLG+lGFLstgd+ ++ GN+GLlD ++ALrW eNI +FGGDP ++T KIAA1070 213 YRLGVLGFLSTGDQAAK---GNYGLLDLIQALRWTSENIGFFGGDPLRIT 259 lFGeSAGAaSVsllllS........ppqsrGLFhrAIlqSGsalspwait +FG +AG+++V+ll+lS+ +++++ +++GLF+rAI qSG+als+wa++ KIAA1070 260 VFGSGAGGSCVNLLTLShysegnrwSNSTKGLFQRAIAQSGTALSSWAVS 309 sppearnrakrlAkllGCpgedseelveCLRkksaeelldaqwkllllee +p ++a+ lA+++GC+ +d elveCL+kk+ +el+d++ +++++ KIAA1070 310 FQP--AKYARMLATKVGCNVSDTVELVECLQKKPYKELVDQDI--QPARY 355 fgffplfpFgPVvdGdtpdaflpkdPeellkegnfnkvPlliGvtsdEGl f PV+dGd ++p+dP++l+++g+f ++++++Gv++ EGl KIAA1070 356 HIAFG-----PVIDGD----VIPDDPQILMEQGEFLNYDIMLGVNQGEGL 396 lflayvl.dp.lsadllseidnedlflellpellpgase.steklreeia f+ + + ++ s +d+++ +++ ++l+g++e++ + ++ KIAA1070 397 KFVENIVdSDdG----ISASDFDF-AVSNFVDNLYGYPEgK-----DVLR 436 daikeeYtdd.dd.nseesrrdalldllsDylFvcPilrlalaraakags ++ik++Ytd+ d++n+e++r + ll l++D+++v+P +++ ++ ++++gs KIAA1070 437 ETIKFMYTDWaDRhNPETRR-KTLLALFTDHQWVAP-AVATADLHSNFGS 484 pvYlYrFdyrssdsfnqyrinllwppwrgvsHgdelsYvFGnpls.k.ly p+Y+Y F +++ ++ p w + Hgde++Yv+G p++++++ KIAA1070 485 PTYFYAFYHHCQ--------TDQVPAWADAAHGDEVPYVLGIPMIgPtEL 526 ....sseeeemlssrrmmrywtnFAktGnPN.............ngessg + ++s+ ++mls +++m+ywtnFAktG+PN++ +++++ +++++ ++ KIAA1070 527 fpcnFSKNDVMLS-AVVMTYWTNFAKTGDPNqpvpqdtkfihtkPNR-FE 574 lvkWppytkeeqkyylpitllnitqk.lreedPrkvkcafw<-* +v W +y++++q yl+i+l++++ ++r+++ +++w KIAA1070 575 EVAWTRYSQKDQ-LYLHIGLKPRVKEhYRANK-----VNLW 609 PF00135.18.ls: domain 1 of 1, from 36 to 609: score 715.9, E = 2.5e-212 *->mllllllllllllflavvataptspedpvVeTsyvgGkvrGlrvkvd ml++ll+ ++l+ ++ V+T+ Gk+rG++ + + KIAA1070 36 MLGCLLQAGHVLSQKLDDVDP-------LVATNF--GKIRGIKKELN 73 g.gnkpvyaFlGIPYAkPPvGeLRFkkPqPpepWtgvldATkygpaCpQ. +++ +pv +FlG+PYA+PP+Ge+RF++P+Pp+pW+++++AT+++p+CpQ+ KIAA1070 74 NeILGPVIQFLGVPYAAPPTGERRFQPPEPPSPWSDIRNATQFAPVCPQn 123 ndlgfpgfslal.hv.gsemwnkntg......ksmSEDCLYLNVytPkla + g +l++v ++ +++ n+ ++ +++SEDCLYLN+y+P+ + KIAA1070 124 IIDG------RLpEVmLPVWFTNNLDvvssyvQDQSEDCLYLNIYVPTED 167 senk...klPVmVwIHGGGFqsGsassvslddydgpdlaasedVVVVtiN + ++++++ PVmV+IHGG +++G++ ++ydg++la++++V+V+t+N KIAA1070 168 DIRDsggPKPVMVYIHGGSYMEGTG-----NLYDGSVLASYGNVIVITVN 212 YRLGalGFLstgdselppppGNaGLlDQvlALrWVqeNIaaFGGDPdnVT YRLG+lGFLstgd+ ++ GN+GLlD ++ALrW eNI +FGGDP ++T KIAA1070 213 YRLGVLGFLSTGDQAAK---GNYGLLDLIQALRWTSENIGFFGGDPLRIT 259 lFGeSAGAaSVsllllS........ppqsrGLFhrAIlqSGsalspwait +FG +AG+++V+ll+lS+ +++++ +++GLF+rAI qSG+als+wa++ KIAA1070 260 VFGSGAGGSCVNLLTLShysegnrwSNSTKGLFQRAIAQSGTALSSWAVS 309 sppearnrakrlAkllGCpgedseelveCLRkksaeelldaqwkllllee +p ++a+ lA+++GC+ +d elveCL+kk+ +el+d++ +++++ KIAA1070 310 FQP--AKYARMLATKVGCNVSDTVELVECLQKKPYKELVDQDI--QPARY 355 fgffplfpFgPVvdGdtpdaflpkdPeellkegnfnkvPlliGvtsdEGl f PV+dGd ++p+dP++l+++g+f ++++++Gv++ EGl KIAA1070 356 HIAFG-----PVIDGD----VIPDDPQILMEQGEFLNYDIMLGVNQGEGL 396 lflayvl.dp.lsadllseidnedlflellpellpgase.steklreeia f+ + + ++ s +d+++ +++ ++l+g++e++ + ++ KIAA1070 397 KFVENIVdSDdG----ISASDFDF-AVSNFVDNLYGYPEgK-----DVLR 436 daikeeYtdd.dd.nseesrrdalldllsDylFvcPilrlalaraakags ++ik++Ytd+ d++n+e++r + ll l++D+++v+P +++ ++ ++++gs KIAA1070 437 ETIKFMYTDWaDRhNPETRR-KTLLALFTDHQWVAP-AVATADLHSNFGS 484 pvYlYrFdyrssdsfnqyrinllwppwrgvsHgdelsYvFGnpls.k.ly p+Y+Y F +++ ++ p w + Hgde++Yv+G p++++++ KIAA1070 485 PTYFYAFYHHCQ--------TDQVPAWADAAHGDEVPYVLGIPMIgPtEL 526 ....sseeeemlssrrmmrywtnFAktGnPN.............ngessg + ++s+ ++mls +++m+ywtnFAktG+PN++ +++++ +++++ ++ KIAA1070 527 fpcnFSKNDVMLS-AVVMTYWTNFAKTGDPNqpvpqdtkfihtkPNR-FE 574 lvkWppytkeeqkyylpitllnitqk.lreedPrkvkcafw<-* +v W +y++++q yl+i+l++++ ++r+++ +++w KIAA1070 575 EVAWTRYSQKDQ-LYLHIGLKPRVKEhYRANK-----VNLW 609 //