hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16122365/chunk_1/iprscan-20080501-16122365.nocrc
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Query sequence: KIAA1058
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00233                                                  71.0    1.5e-16   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00233     1/1     201   309 ..     1    82 []    71.0  1.5e-16

Alignments of top-scoring domains:
SM00233: domain 1 of 1, from 201 to 309: score 71.0, E = 1.5e-16
                   *->vikeGwLlkks........k.swkkryfvLfn.....gvLlyyksk.
                      ++k+GwL+k   ++  + + +s+k+r+f L   ++++  L +yk+++
    KIAA1058   201    ITKHGWLYKGNmnsaisvtMrSFKRRFFHLIQlgdgsYNLNFYKDEk 247  

                   ...kpkgsipLsgc.svre.p.....cFeivt.dr.tlllqAeseeeree
                    +++pkgsi+L++c  v+ + + ++ +Fe++++d++++ll+A+se e+ee
    KIAA1058   248 iskEPKGSIFLDSCmGVVQnNkvrrfAFELKMqDKsSYLLAADSEVEMEE 297  

                   Wvealqsaiaka<-*
                   W++ l++ ++ +   
    KIAA1058   298 WITILNKILQLN    309  

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