hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15571500/chunk_1/iprscan-20080501-15571500.nocrc
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Query sequence: KIAA1049
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04910.5.fs Protein of unknown function, DUF654            726.0   2.3e-215   1
PF04910.5.ls Protein of unknown function, DUF654            723.1   1.7e-214   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04910.5.fs   1/1     113   474 ..     1   462 [.   726.0 2.3e-215
PF04910.5.ls   1/1     113   524 ..     1   510 []   723.1 1.7e-214

Alignments of top-scoring domains:
PF04910.5.fs: domain 1 of 1, from 113 to 474: score 726.0, E = 2.3e-215
                   *->teeskdwqsfFafthSnaYqPLNSDLSKKqaQrmFlaavermdpVqn
                      + esk++ sfFaf+hS++Yq         qaQ++Fl+ave+m+p  n
    KIAA1049   113    L-ESKKGLSFFAFEHSEEYQ---------QAQHKFLVAVESMEP--N 147  

                   nvieLlSrktPYHidsLLQvaeifkmqGDfelAaeLleRALYvldralhp
                   n+++Ll +++PYH+dsLLQ+++++++q+D+e+A++L+eRALY++++a+hp
    KIAA1049   148 NIVVLL-QTSPYHVDSLLQLSDACRFQEDQEMARDLVERALYSMECAFHP 196  

                   nFslfsgncRqLdYrrpeNRlFYlvLfRhmqsLakRGCwRTAfEvcKlLL
                   +Fsl+sg+cR LdYrrpeNR+FYl+L+++m++L+kRGC+RTA+E+cKl+L
    KIAA1049   197 LFSLTSGACR-LDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLIL 245  

                   SLdPdeDPlgmllliDyyALRakeYaWLiefseeaenVRAARRqPRRGAA
                   SL+PdeDPl+mllliD++ALRa++Y++Li++++e+e+             
    KIAA1049   246 SLEPDEDPLCMLLLIDHLALRARNYEYLIRLFQEWEA------------- 282  

                   AESEEADVKEALAAAGLTLRDAALanklsqlPNfaYSlALArfflekeee
                                           +++lsqlPNfa+S++LA+f+l+++++
    KIAA1049   283 ------------------------HRNLSQLPNFAFSVPLAYFLLSQQTD 308  

                   dreSeevsrdasrqsKVLRGLTAAqRASLAATPsArnlLlaAlkrfPgvL
                    +e+e   ++++rq+                   A+ l+++Al++fPgvL
    KIAA1049   309 LPECE---QSSARQK-------------------ASLLIQQALTMFPGVL 336  

                   seLldelsGVDVVCGTEGATLSisddasVlqlkflqAGtsdvsisqapal
                   ++Ll+++s              +++dasV++++f+   +++++isq+pal
    KIAA1049   337 LPLLESCS--------------VRPDASVSSHRFF---GPNAEISQPPAL 369  

                   nlLvklYvkRaellWklpevlsfLesavrkvlqsletgepevdsgDGsee
                   ++Lv+lY++R+++lWk+p+++s+Le++v++vlq++++g+p+v        
    KIAA1049   370 SQLVNLYLGRSHFLWKEPATMSWLEENVHEVLQAVDAGDPAV-------- 411  

                   eeweekRsilysgtsprNilRhviLseisskvpAiLppdvlqneVmefDp
                   e++e++R++ly+ ++prNi+RhviLsei+++v+ +Lppdv++++Vm+fDp
    KIAA1049   412 EACENRRKVLYQ-RAPRNIHRHVILSEIKEAVA-ALPPDVTTQSVMGFDP 459  

                   LPPdntlegysresr<-*
                   LPP++t+++y+r++r   
    KIAA1049   460 LPPSDTIYSYVRPER    474  

PF04910.5.ls: domain 1 of 1, from 113 to 524: score 723.1, E = 1.7e-214
                   *->teeskdwqsfFafthSnaYqPLNSDLSKKqaQrmFlaavermdpVqn
                      + esk++ sfFaf+hS++Yq         qaQ++Fl+ave+m+p  n
    KIAA1049   113    L-ESKKGLSFFAFEHSEEYQ---------QAQHKFLVAVESMEP--N 147  

                   nvieLlSrktPYHidsLLQvaeifkmqGDfelAaeLleRALYvldralhp
                   n+++Ll +++PYH+dsLLQ+++++++q+D+e+A++L+eRALY++++a+hp
    KIAA1049   148 NIVVLL-QTSPYHVDSLLQLSDACRFQEDQEMARDLVERALYSMECAFHP 196  

                   nFslfsgncRqLdYrrpeNRlFYlvLfRhmqsLakRGCwRTAfEvcKlLL
                   +Fsl+sg+cR LdYrrpeNR+FYl+L+++m++L+kRGC+RTA+E+cKl+L
    KIAA1049   197 LFSLTSGACR-LDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLIL 245  

                   SLdPdeDPlgmllliDyyALRakeYaWLiefseeaenVRAARRqPRRGAA
                   SL+PdeDPl+mllliD++ALRa++Y++Li++++e+e+             
    KIAA1049   246 SLEPDEDPLCMLLLIDHLALRARNYEYLIRLFQEWEA------------- 282  

                   AESEEADVKEALAAAGLTLRDAALanklsqlPNfaYSlALArfflekeee
                                           +++lsqlPNfa+S++LA+f+l+++++
    KIAA1049   283 ------------------------HRNLSQLPNFAFSVPLAYFLLSQQTD 308  

                   dreSeevsrdasrqsKVLRGLTAAqRASLAATPsArnlLlaAlkrfPgvL
                    +e+e   ++++rq+                   A+ l+++Al++fPgvL
    KIAA1049   309 LPECE---QSSARQK-------------------ASLLIQQALTMFPGVL 336  

                   seLldelsGVDVVCGTEGATLSisddasVlqlkflqAGtsdvsisqapal
                   ++Ll+++s              +++dasV++++f+   +++++isq+pal
    KIAA1049   337 LPLLESCS--------------VRPDASVSSHRFF---GPNAEISQPPAL 369  

                   nlLvklYvkRaellWklpevlsfLesavrkvlqsletgepevdsgDGsee
                   ++Lv+lY++R+++lWk+p+++s+Le++v++vlq++++g+p+v        
    KIAA1049   370 SQLVNLYLGRSHFLWKEPATMSWLEENVHEVLQAVDAGDPAV-------- 411  

                   eeweekRsilysgtsprNilRhviLseisskvpAiLppdvlqneVmefDp
                   e++e++R++ly+ ++prNi+RhviLsei+++v+ +Lppdv++++Vm+fDp
    KIAA1049   412 EACENRRKVLYQ-RAPRNIHRHVILSEIKEAVA-ALPPDVTTQSVMGFDP 459  

                   LPPdntlegysresrelseriksdln..ekslfvqrveslldenlltqge
                   LPP++t+++y+r++r ++   +++++  ++sl+ +  ++ ++++   +g 
    KIAA1049   460 LPPSDTIYSYVRPERLSPISHGNTIAlfFRSLLPNYTMEGERPEEGVAGG 509  

                   qeplgqalheveeea<-*
                   +++ +++    +  +   
    KIAA1049   510 LNRNQGLNRLMLAVR    524  

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