# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh00940.fasta.nr -Q ../query/KIAA1046.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1046, 427 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7824396 sequences Expectation_n fit: rho(ln(x))= 5.7559+/-0.000193; mu= 9.1442+/- 0.011 mean_var=92.5219+/-17.720, 0's: 28 Z-trim: 32 B-trim: 91 in 1/65 Lambda= 0.133337 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|211828431|gb|AAH57242.2| OTUD4 protein [Homo sa ( 511) 2852 558.5 1.3e-156 gi|89473594|gb|ABD72605.1| OTUD4: OTU domain conta (1048) 2852 558.8 2.2e-156 gi|110002479|gb|AAI18573.1| OTU domain containing (1049) 2852 558.8 2.2e-156 gi|118572680|sp|Q01804.2|OTUD4_HUMAN RecName: Full (1114) 2852 558.8 2.3e-156 gi|109075795|ref|XP_001095354.1| PREDICTED: simila (1113) 2829 554.4 4.9e-155 gi|119625449|gb|EAX05044.1| OTU domain containing ( 401) 2795 547.5 2.1e-153 gi|194208419|ref|XP_001500727.2| PREDICTED: simila (1045) 2574 505.3 2.7e-140 gi|73978274|ref|XP_532680.2| PREDICTED: similar to ( 906) 2472 485.6 2e-134 gi|72679338|gb|AAI00160.1| Otud4 protein [Rattus n ( 481) 2435 478.3 1.7e-132 gi|54035502|gb|AAH83886.1| Otud4 protein [Rattus n ( 553) 2435 478.3 1.9e-132 gi|219519341|gb|AAI45260.1| OTU domain containing (1106) 2436 478.8 2.8e-132 gi|187952879|gb|AAI38374.1| Otud4 protein [Mus mus (1107) 2436 478.8 2.8e-132 gi|109508722|ref|XP_001074219.1| PREDICTED: simila (1058) 2435 478.6 3.1e-132 gi|109508013|ref|XP_226388.4| PREDICTED: similar t (1110) 2435 478.6 3.2e-132 gi|148678928|gb|EDL10875.1| mCG142683 [Mus musculu ( 874) 2421 475.8 1.7e-131 gi|6808040|emb|CAB70748.1| hypothetical protein [H ( 300) 2052 404.5 1.8e-110 gi|126331502|ref|XP_001377096.1| PREDICTED: simila (1131) 2028 400.3 1.2e-108 gi|118142854|gb|AAH20682.1| OTUD4 protein [Homo sa ( 327) 1973 389.3 7.1e-106 gi|16552046|dbj|BAB71229.1| unnamed protein produc ( 644) 1975 389.9 9.1e-106 gi|149635670|ref|XP_001513517.1| PREDICTED: simila (1127) 1611 320.1 1.7e-84 gi|118089937|ref|XP_420427.2| PREDICTED: similar t (1133) 1377 275.1 6e-71 gi|12853551|dbj|BAB29777.1| unnamed protein produc ( 178) 1046 210.8 2.1e-52 gi|114108238|gb|AAI22972.1| HIV-1 induced protein (1051) 724 149.4 3.7e-33 >>gi|211828431|gb|AAH57242.2| OTUD4 protein [Homo sapien (511 aa) initn: 2844 init1: 2844 opt: 2852 Z-score: 2968.2 bits: 558.5 E(): 1.3e-156 Smith-Waterman score: 2852; 97.176% identity (98.353% similar) in 425 aa overlap (3-427:90-511) 10 20 30 KIAA10 YPPKPLFFLLFCLFNCFLSLQAYSCPMWAPHS :: .: : .:: :...::::::::::: gi|211 DPLYPGFPCNEKGDRAIVPPYSLCQTGEDLPKDKNILRF-FFN--LGVKAYSCPMWAPHS 60 70 80 90 100 110 40 50 60 70 80 90 KIAA10 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ 120 130 140 150 160 170 100 110 120 130 140 150 KIAA10 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ 180 190 200 210 220 230 160 170 180 190 200 210 KIAA10 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL 240 250 260 270 280 290 220 230 240 250 260 270 KIAA10 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG 300 310 320 330 340 350 280 290 300 310 320 330 KIAA10 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP 360 370 380 390 400 410 340 350 360 370 380 390 KIAA10 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR 420 430 440 450 460 470 400 410 420 KIAA10 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT ::::::::::::::::::::::::::::::::::: gi|211 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT 480 490 500 510 >>gi|89473594|gb|ABD72605.1| OTUD4: OTU domain containin (1048 aa) initn: 2844 init1: 2844 opt: 2852 Z-score: 2963.9 bits: 558.8 E(): 2.2e-156 Smith-Waterman score: 2852; 97.176% identity (98.353% similar) in 425 aa overlap (3-427:627-1048) 10 20 30 KIAA10 YPPKPLFFLLFCLFNCFLSLQAYSCPMWAPHS :: .: : .:: :...::::::::::: gi|894 DPLYPGFPCNEKGDRAIVPPYSLCQTGEDLPKDKNILRF-FFN--LGVKAYSCPMWAPHS 600 610 620 630 640 650 40 50 60 70 80 90 KIAA10 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|894 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ 660 670 680 690 700 710 100 110 120 130 140 150 KIAA10 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|894 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ 720 730 740 750 760 770 160 170 180 190 200 210 KIAA10 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|894 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL 780 790 800 810 820 830 220 230 240 250 260 270 KIAA10 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|894 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG 840 850 860 870 880 890 280 290 300 310 320 330 KIAA10 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|894 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP 900 910 920 930 940 950 340 350 360 370 380 390 KIAA10 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|894 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR 960 970 980 990 1000 1010 400 410 420 KIAA10 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT ::::::::::::::::::::::::::::::::::: gi|894 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT 1020 1030 1040 >>gi|110002479|gb|AAI18573.1| OTU domain containing 4 [H (1049 aa) initn: 2844 init1: 2844 opt: 2852 Z-score: 2963.9 bits: 558.8 E(): 2.2e-156 Smith-Waterman score: 2852; 97.176% identity (98.353% similar) in 425 aa overlap (3-427:628-1049) 10 20 30 KIAA10 YPPKPLFFLLFCLFNCFLSLQAYSCPMWAPHS :: .: : .:: :...::::::::::: gi|110 DPLYPGFPCNEKGDRAIVPPYSLCQTGEDLPKDKNILRF-FFN--LGVKAYSCPMWAPHS 600 610 620 630 640 650 40 50 60 70 80 90 KIAA10 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ 660 670 680 690 700 710 100 110 120 130 140 150 KIAA10 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ 720 730 740 750 760 770 160 170 180 190 200 210 KIAA10 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL 780 790 800 810 820 830 220 230 240 250 260 270 KIAA10 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG 840 850 860 870 880 890 280 290 300 310 320 330 KIAA10 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP 900 910 920 930 940 950 340 350 360 370 380 390 KIAA10 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR 960 970 980 990 1000 1010 400 410 420 KIAA10 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT ::::::::::::::::::::::::::::::::::: gi|110 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT 1020 1030 1040 >>gi|118572680|sp|Q01804.2|OTUD4_HUMAN RecName: Full=OTU (1114 aa) initn: 2844 init1: 2844 opt: 2852 Z-score: 2963.5 bits: 558.8 E(): 2.3e-156 Smith-Waterman score: 2852; 97.176% identity (98.353% similar) in 425 aa overlap (3-427:693-1114) 10 20 30 KIAA10 YPPKPLFFLLFCLFNCFLSLQAYSCPMWAPHS :: .: : .:: :...::::::::::: gi|118 DPLYPGFPCNEKGDRAIVPPYSLCQTGEDLPKDKNILRF-FFN--LGVKAYSCPMWAPHS 670 680 690 700 710 40 50 60 70 80 90 KIAA10 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ 720 730 740 750 760 770 100 110 120 130 140 150 KIAA10 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ 780 790 800 810 820 830 160 170 180 190 200 210 KIAA10 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL 840 850 860 870 880 890 220 230 240 250 260 270 KIAA10 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG 900 910 920 930 940 950 280 290 300 310 320 330 KIAA10 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP 960 970 980 990 1000 1010 340 350 360 370 380 390 KIAA10 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR 1020 1030 1040 1050 1060 1070 400 410 420 KIAA10 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT ::::::::::::::::::::::::::::::::::: gi|118 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT 1080 1090 1100 1110 >>gi|109075795|ref|XP_001095354.1| PREDICTED: similar to (1113 aa) initn: 2821 init1: 2821 opt: 2829 Z-score: 2939.6 bits: 554.4 E(): 4.9e-155 Smith-Waterman score: 2829; 96.000% identity (98.118% similar) in 425 aa overlap (3-427:692-1113) 10 20 30 KIAA10 YPPKPLFFLLFCLFNCFLSLQAYSCPMWAPHS :: .: : .:: :...::::::::::: gi|109 DPLYPGFPCNEKGDRAIVPPYSLCQTGEDLPKDKNILRF-FFN--LGVKAYSCPMWAPHS 670 680 690 700 710 40 50 60 70 80 90 KIAA10 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|109 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCACTDAHFPMQTEASVNGQ 720 730 740 750 760 770 100 110 120 130 140 150 KIAA10 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ 780 790 800 810 820 830 160 170 180 190 200 210 KIAA10 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL 840 850 860 870 880 890 220 230 240 250 260 270 KIAA10 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG :::::::::::::::::::::::::::::::::.:::::::::::::: ::::.:::::: gi|109 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPEEGRTEQSSQTRKADMALASVPPVAEG 900 910 920 930 940 950 280 290 300 310 320 330 KIAA10 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP 960 970 980 990 1000 1010 340 350 360 370 380 390 KIAA10 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|109 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRGEESWKGQPSR 1020 1030 1040 1050 1060 1070 400 410 420 KIAA10 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT ::::::::::::::::::::::::::::::::::: gi|109 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT 1080 1090 1100 1110 >>gi|119625449|gb|EAX05044.1| OTU domain containing 4, i (401 aa) initn: 2795 init1: 2795 opt: 2795 Z-score: 2910.4 bits: 547.5 E(): 2.1e-153 Smith-Waterman score: 2795; 100.000% identity (100.000% similar) in 401 aa overlap (27-427:1-401) 10 20 30 40 50 60 KIAA10 YPPKPLFFLLFCLFNCFLSLQAYSCPMWAPHSYLYPLHQAYLAACRMYPKVPVPVYPHNP :::::::::::::::::::::::::::::::::: gi|119 MWAPHSYLYPLHQAYLAACRMYPKVPVPVYPHNP 10 20 30 70 80 90 100 110 120 KIAA10 WFQEAPAAQNESDCTCTDAHFPMQTEASVNGQMPQPEIGPPTFSSPLVIPPSQVSESHGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 WFQEAPAAQNESDCTCTDAHFPMQTEASVNGQMPQPEIGPPTFSSPLVIPPSQVSESHGQ 40 50 60 70 80 90 130 140 150 160 170 180 KIAA10 LSYQADLESETPGQLLHADYEESLSGKNMFPQPSFGPNPFLGPVPIAPPFFPHVWYGYPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LSYQADLESETPGQLLHADYEESLSGKNMFPQPSFGPNPFLGPVPIAPPFFPHVWYGYPF 100 110 120 130 140 150 190 200 210 220 230 240 KIAA10 QGFIENPVMRQNIVLPSDEKGELDLSLENLDLSKDCGSVSTVDEFPEARGEHVHSLPEAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QGFIENPVMRQNIVLPSDEKGELDLSLENLDLSKDCGSVSTVDEFPEARGEHVHSLPEAS 160 170 180 190 200 210 250 260 270 280 290 300 KIAA10 VSSKPDEGRTEQSSQTRKADTALASIPPVAEGKAHPPTQILNRERETVPVELEPKRTIQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VSSKPDEGRTEQSSQTRKADTALASIPPVAEGKAHPPTQILNRERETVPVELEPKRTIQS 220 230 240 250 260 270 310 320 330 340 350 360 KIAA10 LKEKTEKVKDPKTAADVVSPGANSVDSRVQRPKEESSEDENEVSNILRSGRSKQFYNQTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKEKTEKVKDPKTAADVVSPGANSVDSRVQRPKEESSEDENEVSNILRSGRSKQFYNQTY 280 290 300 310 320 330 370 380 390 400 410 420 KIAA10 GSRKYKSDWGYSGRGGYQHVRSEESWKGQPSRSRDEGYQYHRNVRGRPFRGDRRRSGMGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GSRKYKSDWGYSGRGGYQHVRSEESWKGQPSRSRDEGYQYHRNVRGRPFRGDRRRSGMGD 340 350 360 370 380 390 KIAA10 GHRGQHT ::::::: gi|119 GHRGQHT 400 >>gi|194208419|ref|XP_001500727.2| PREDICTED: similar to (1045 aa) initn: 2185 init1: 1478 opt: 2574 Z-score: 2674.9 bits: 505.3 E(): 2.7e-140 Smith-Waterman score: 2574; 88.679% identity (94.575% similar) in 424 aa overlap (3-426:627-1044) 10 20 30 KIAA10 YPPKPLFFLLFCLFNCFLSLQAYSCPMWAPHS :: .: : .:: :...::::::::::: gi|194 DPLYPGFPYNEKGDRAIAPPYSLCHTGEDLPKDKNILRF-FFN--LGVKAYSCPMWAPHS 600 610 620 630 640 650 40 50 60 70 80 90 KIAA10 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ :::::::::::::::::::::::::.::::::::.::::::::::::::::::::::::: gi|194 YLYPLHQAYLAACRMYPKVPVPVYPQNPWFQEAPSAQNESDCTCTDAHFPMQTEASVNGQ 660 670 680 690 700 710 100 110 120 130 140 150 KIAA10 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ ::: ::::::::::::::::::::::::::::::::::. ::::::.::::::::::::: gi|194 MPQAEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESENSGQLLHAEYEESLSGKNMFPQ 720 730 740 750 760 770 160 170 180 190 200 210 KIAA10 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL :::::::::::::::::::::::::::::::.::::::::::::::::::::: :::::: gi|194 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFVENPVMRQNIVLPSDEKGELDLPLENLDL 780 790 800 810 820 830 220 230 240 250 260 270 KIAA10 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG ::.::: ..:.:: ::::: .: :::::::.. :::.:::::: ::: ::::.:::::: gi|194 SKECGSGAAVEEFQEARGEGTHCLPEASVSKH--EGRVEQSSQTPKADLALASVPPVAEG 840 850 860 870 880 890 280 290 300 310 320 330 KIAA10 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP :: :::::::::::::::::::::: ::::: :::::::::::::: :::::::::::: gi|194 KAPLPTQILNRERETVPVELEPKRTIPSLKEKPEKVKDPKTAADVVS-GANSVDSRVQRP 900 910 920 930 940 950 340 350 360 370 380 390 KIAA10 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR ::::::::.::::::::::::::::::::.:::::::::::::::::.:.:::::::::: gi|194 KEESSEDESEVSNILRSGRSKQFYNQTYGGRKYKSDWGYSGRGGYQHARGEESWKGQPSR 960 970 980 990 1000 1010 400 410 420 KIAA10 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT .:::::::::::::::.::::::::::::::::: gi|194 NRDEGYQYHRNVRGRPYRGDRRRSGMGDGHRGQHA 1020 1030 1040 >>gi|73978274|ref|XP_532680.2| PREDICTED: similar to HIV (906 aa) initn: 2283 init1: 1250 opt: 2472 Z-score: 2569.7 bits: 485.6 E(): 2e-134 Smith-Waterman score: 2472; 85.882% identity (93.176% similar) in 425 aa overlap (3-427:489-906) 10 20 30 KIAA10 YPPKPLFFLLFCLFNCFLSLQAYSCPMWAPHS :: .: : .:: :...::::::::::: gi|739 DPLYPGFPYNEKGDRAIAPPYSLCHTGEDLPKDKNILRF-FFN--LGVKAYSCPMWAPHS 460 470 480 490 500 510 40 50 60 70 80 90 KIAA10 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ ::::::::::::::::::: ::::: ::::::::.::::.:::::::::::::::.:::: gi|739 YLYPLHQAYLAACRMYPKVSVPVYPPNPWFQEAPSAQNEGDCTCTDAHFPMQTEATVNGQ 520 530 540 550 560 570 100 110 120 130 140 150 KIAA10 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ ::: ::::::::::::::::::::::::::::::.:::. ::::::.::::::::::::: gi|739 MPQAEIGPPTFSSPLVIPPSQVSESHGQLSYQADIESENSGQLLHAEYEESLSGKNMFPQ 580 590 600 610 620 630 160 170 180 190 200 210 KIAA10 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL :::::::::::::::::::::::::::::::.:::::::::::::::: :::: ::.::: gi|739 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFVENPVMRQNIVLPSDEK-ELDLPLESLDL 640 650 660 670 680 690 220 230 240 250 260 270 KIAA10 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG ::.: :::.:::: ::::: .: ::::::... :::.:::::: :.: : :: :::: gi|739 SKECVSVSAVDEFQEARGEGTHCLPEASVGKH--EGRAEQSSQTPKVDLARPSILPVAEE 700 710 720 730 740 750 280 290 300 310 320 330 KIAA10 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP .:: :::::::::::::::::::::: :::::.:::::::::::.:: :::::.:::::: gi|739 EAHLPTQILNRERETVPVELEPKRTIPSLKEKSEKVKDPKTAADAVS-GANSVESRVQRP 760 770 780 790 800 810 340 350 360 370 380 390 KIAA10 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR :::::::::::::::::::::::::::::.:::::::: ::::::::.:.::::::::.: gi|739 KEESSEDENEVSNILRSGRSKQFYNQTYGGRKYKSDWGSSGRGGYQHARGEESWKGQPGR 820 830 840 850 860 870 400 410 420 KIAA10 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT ::::::::::::::::.::::::::::::::::.: gi|739 SRDEGYQYHRNVRGRPYRGDRRRSGMGDGHRGQNT 880 890 900 >>gi|72679338|gb|AAI00160.1| Otud4 protein [Rattus norve (481 aa) initn: 2051 init1: 1388 opt: 2435 Z-score: 2535.0 bits: 478.3 E(): 1.7e-132 Smith-Waterman score: 2435; 83.529% identity (91.765% similar) in 425 aa overlap (3-427:62-481) 10 20 30 KIAA10 YPPKPLFFLLFCLFNCFLSLQAYSCPMWAPHS :: .: : .:: :...::::::::::: gi|726 DPLYPGFPCSEKGDRAIAPPYSLCQTGEDLPKDKNILRF-FFN--LGVKAYSCPMWAPHS 40 50 60 70 80 40 50 60 70 80 90 KIAA10 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ :::::::::.::::.::::::::::.. :::::: ::.:::: :.:::. :. ::::::: gi|726 YLYPLHQAYMAACRVYPKVPVPVYPQSTWFQEAPPAQSESDCPCADAHYSMHPEASVNGQ 90 100 110 120 130 140 100 110 120 130 140 150 KIAA10 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ ::: :::::.::::::::::::::.::::::: .::::.:::::::.::::::::::.:: gi|726 MPQAEIGPPAFSSPLVIPPSQVSEGHGQLSYQPELESESPGQLLHAEYEESLSGKNMYPQ 150 160 170 180 190 200 160 170 180 190 200 210 KIAA10 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL ::::::::::::::::::::::::::::::.:::::::::::: :.:::::: :::::: gi|726 QSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFVENPVMRQNIVLPPDDKGELDLPLENLDL 210 220 230 240 250 260 220 230 240 250 260 270 KIAA10 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG ::.: :::.:::::::: : .::: ::::::: :::.:::::::::: :.: .:: gi|726 SKECDSVSAVDEFPEARVEGAHSLSEASVSSK-HEGRVEQSSQTRKADIDLSSGSSGVEG 270 280 290 300 310 320 280 290 300 310 320 330 KIAA10 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP ::::::::::::::.: .: :::::::::::: ::::::::::::.: :::::: :.::: gi|726 KAHPPTQILNREREAVSAEPEPKRTIQSLKEKPEKVKDPKTAADVLSSGANSVD-RLQRP 330 340 350 360 370 380 340 350 360 370 380 390 KIAA10 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR :::::::::::::::::::::::::::::::::::::: ::::::::::.::::::::.: gi|726 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGSSGRGGYQHVRGEESWKGQPNR 390 400 410 420 430 440 400 410 420 KIAA10 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT ::::::::::.:::::.:::::::::::::::::: gi|726 SRDEGYQYHRHVRGRPYRGDRRRSGMGDGHRGQHT 450 460 470 480 >>gi|54035502|gb|AAH83886.1| Otud4 protein [Rattus norve (553 aa) initn: 2051 init1: 1388 opt: 2435 Z-score: 2534.2 bits: 478.3 E(): 1.9e-132 Smith-Waterman score: 2435; 83.529% identity (91.765% similar) in 425 aa overlap (3-427:134-553) 10 20 30 KIAA10 YPPKPLFFLLFCLFNCFLSLQAYSCPMWAPHS :: .: : .:: :...::::::::::: gi|540 DPLYPGFPCSEKGDRAIAPPYSLCQTGEDLPKDKNILRF-FFN--LGVKAYSCPMWAPHS 110 120 130 140 150 160 40 50 60 70 80 90 KIAA10 YLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPMQTEASVNGQ :::::::::.::::.::::::::::.. :::::: ::.:::: :.:::. :. ::::::: gi|540 YLYPLHQAYMAACRVYPKVPVPVYPQSTWFQEAPPAQSESDCPCADAHYSMHPEASVNGQ 170 180 190 200 210 220 100 110 120 130 140 150 KIAA10 MPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQ ::: :::::.::::::::::::::.::::::: .::::.:::::::.::::::::::.:: gi|540 MPQAEIGPPAFSSPLVIPPSQVSEGHGQLSYQPELESESPGQLLHAEYEESLSGKNMYPQ 230 240 250 260 270 280 160 170 180 190 200 210 KIAA10 PSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDL ::::::::::::::::::::::::::::::.:::::::::::: :.:::::: :::::: gi|540 QSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFVENPVMRQNIVLPPDDKGELDLPLENLDL 290 300 310 320 330 340 220 230 240 250 260 270 KIAA10 SKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEG ::.: :::.:::::::: : .::: ::::::: :::.:::::::::: :.: .:: gi|540 SKECDSVSAVDEFPEARVEGAHSLSEASVSSK-HEGRVEQSSQTRKADIDLSSGSSGVEG 350 360 370 380 390 280 290 300 310 320 330 KIAA10 KAHPPTQILNRERETVPVELEPKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRP ::::::::::::::.: .: :::::::::::: ::::::::::::.: :::::: :.::: gi|540 KAHPPTQILNREREAVSAEPEPKRTIQSLKEKPEKVKDPKTAADVLSSGANSVD-RLQRP 400 410 420 430 440 450 340 350 360 370 380 390 KIAA10 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGYSGRGGYQHVRSEESWKGQPSR :::::::::::::::::::::::::::::::::::::: ::::::::::.::::::::.: gi|540 KEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGSSGRGGYQHVRGEESWKGQPNR 460 470 480 490 500 510 400 410 420 KIAA10 SRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT ::::::::::.:::::.:::::::::::::::::: gi|540 SRDEGYQYHRHVRGRPYRGDRRRSGMGDGHRGQHT 520 530 540 550 427 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 15:29:09 2009 done: Tue Mar 3 15:33:58 2009 Total Scan time: 1500.940 Total Display time: 0.190 Function used was FASTA [version 34.26.5 April 26, 2007]