hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15484671/chunk_1/iprscan-20080501-15484671.nocrc
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Query sequence: KIAA1044
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00225                                                  62.3    6.2e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00225    1/1      57   156 ..     1   114 []    62.3  6.2e-14

Alignments of top-scoring domains:
SM00225: domain 1 of 1, from 57 to 156: score 62.3, E = 6.2e-14
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                        ++l+v+g         ++f++  +  +L ++   ++++++  e +
    KIAA1044    57    ALIVLNVSG---------TRFQT--WQDTLERY---PDTLLGSSERd 89   

                   ........ieldDeallievspeaFralLnflYt.kldlpeedvenveel
                      +++++ +++D      ++p++Fr++Lnf++t+kl+ p+   e++  +
    KIAA1044    90 ffyhpetqQYFFD------RDPDIFRHILNFYRTgKLHYPRH--ECISAY 131  

                   LelAdfldSYGqip.lvelCeefllknl<-*
                    e+  f+   G ip+++  C++  +k+    
    KIAA1044   132 DEELAFF---GLIPeIIGDCCYEEYKDR    156  

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