# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fh02337.fasta.nr -Q ../query/KIAA1039.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1039, 444 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7822593 sequences Expectation_n fit: rho(ln(x))= 5.9628+/-0.000193; mu= 7.4871+/- 0.011 mean_var=93.5347+/-17.709, 0's: 31 Z-trim: 37 B-trim: 0 in 0/66 Lambda= 0.132614 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|119610932|gb|EAW90526.1| GTPase activating Rap/ ( 674) 2936 571.9 1.6e-160 gi|119610934|gb|EAW90528.1| GTPase activating Rap/ ( 675) 2936 571.9 1.6e-160 gi|34530484|dbj|BAC85912.1| unnamed protein produc ( 711) 2936 571.9 1.7e-160 gi|156086740|ref|NP_001093868.1| GTPase activating ( 715) 2936 571.9 1.7e-160 gi|162416269|sp|Q684P5.2|RPGP2_HUMAN RecName: Full ( 730) 2936 571.9 1.8e-160 gi|50949940|emb|CAH10514.1| hypothetical protein [ ( 715) 2930 570.7 3.8e-160 gi|51869679|emb|CAF31653.1| Rap1 GTPase activating ( 715) 2930 570.7 3.8e-160 gi|51869677|emb|CAF31652.1| Rap1 GTPase activating ( 730) 2930 570.8 3.9e-160 gi|74187048|dbj|BAE20542.1| unnamed protein produc ( 470) 2769 539.8 5.1e-151 gi|76825585|gb|AAI07389.1| Garnl4 protein [Mus mus ( 518) 2769 539.8 5.6e-151 gi|81862523|sp|Q5SVL6.1|RPGP2_MOUSE RecName: Full= ( 712) 2769 539.9 7.1e-151 gi|73967387|ref|XP_548324.2| PREDICTED: similar to ( 916) 2715 529.7 1.1e-147 gi|194217443|ref|XP_001502535.2| PREDICTED: simila ( 775) 2573 502.5 1.5e-139 gi|162416276|sp|Q5ZMV8.2|RPGP2_CHICK RecName: Full ( 730) 2570 501.9 2.1e-139 gi|53126175|emb|CAG30935.1| hypothetical protein [ ( 751) 2570 501.9 2.2e-139 gi|149637553|ref|XP_001510893.1| PREDICTED: hypoth (1134) 2424 474.1 7.6e-131 gi|148680824|gb|EDL12771.1| GTPase activating RANG ( 517) 2116 414.9 2.3e-113 gi|149053363|gb|EDM05180.1| GTPase activating RANG ( 410) 2113 414.3 2.8e-113 gi|189534018|ref|XP_001920828.1| PREDICTED: simila ( 707) 1756 346.1 1.6e-92 gi|189442497|gb|AAI67480.1| Zgc:175145 protein [Da ( 696) 1730 341.2 4.8e-91 gi|115304761|gb|AAI23396.1| RAP1 GTPase activating ( 663) 1431 283.9 7.7e-74 gi|190856|gb|AAA60252.1| GTPase activating protein ( 663) 1416 281.1 5.7e-73 gi|215273877|sp|P47736.2|RPGP1_HUMAN RecName: Full ( 663) 1416 281.1 5.7e-73 gi|119615390|gb|EAW94984.1| RAP1, GTPase activatin ( 694) 1416 281.1 5.9e-73 gi|119615387|gb|EAW94981.1| RAP1, GTPase activatin ( 727) 1416 281.1 6.1e-73 gi|47208850|emb|CAF92942.1| unnamed protein produc ( 571) 1409 279.7 1.3e-72 gi|32452014|gb|AAH54490.1| RAP1 GTPase activating ( 663) 1409 279.7 1.4e-72 gi|149024349|gb|EDL80846.1| RAP1, GTPase activatin ( 693) 1407 279.4 1.9e-72 gi|149024348|gb|EDL80845.1| RAP1, GTPase activatin ( 727) 1407 279.4 2e-72 gi|123229440|emb|CAM19421.1| Rap1 GTPase-activatin ( 694) 1404 278.8 2.9e-72 gi|124487211|ref|NP_001074624.1| Rap1 GTPase-activ ( 727) 1404 278.8 3e-72 gi|55959690|emb|CAI16255.1| RAP1 GTPase activating ( 693) 1397 277.4 7.3e-72 gi|30354392|gb|AAH52065.1| Rap1gap protein [Mus mu ( 656) 1368 271.9 3.3e-70 gi|123229439|emb|CAM19420.1| Rap1 GTPase-activatin ( 729) 1368 271.9 3.5e-70 gi|21410877|gb|AAH30891.1| Rap1gap protein [Mus mu ( 423) 1306 259.9 8.6e-67 gi|168273006|dbj|BAG10342.1| Rap1 GTPase-activatin ( 681) 1217 243.0 1.7e-61 gi|119615385|gb|EAW94979.1| RAP1, GTPase activatin ( 689) 1217 243.0 1.7e-61 gi|55731989|emb|CAH92703.1| hypothetical protein [ ( 625) 1214 242.4 2.3e-61 gi|108998965|ref|XP_001109771.1| PREDICTED: RAP1, (1242) 1215 242.8 3.5e-61 gi|109475701|ref|XP_233609.4| PREDICTED: similar t ( 753) 1210 241.7 4.6e-61 gi|71296783|gb|AAH35030.1| RAP1GAP protein [Homo s ( 692) 1207 241.1 6.4e-61 gi|119615389|gb|EAW94983.1| RAP1, GTPase activatin ( 617) 1203 240.3 9.9e-61 gi|55729452|emb|CAH91457.1| hypothetical protein [ ( 804) 1203 240.4 1.2e-60 gi|169642403|gb|AAI60660.1| Zgc:175180 protein [Da ( 695) 1199 239.6 1.8e-60 gi|149517546|ref|XP_001517102.1| PREDICTED: simila ( 499) 1176 235.1 3e-59 gi|126631803|gb|AAI33819.1| Zgc:153898 protein [Da ( 472) 1169 233.7 7.3e-59 gi|47204365|emb|CAG14305.1| unnamed protein produc ( 314) 1120 224.2 3.5e-56 gi|5650776|gb|AAD45946.1|AF151966_1 GTPase activat ( 556) 1122 224.8 4.2e-56 gi|148697965|gb|EDL29912.1| mCG120453, isoform CRA ( 458) 1116 223.6 8e-56 gi|148697964|gb|EDL29911.1| mCG120453, isoform CRA ( 489) 1116 223.6 8.4e-56 >>gi|119610932|gb|EAW90526.1| GTPase activating Rap/RanG (674 aa) initn: 2936 init1: 2936 opt: 2936 Z-score: 3037.9 bits: 571.9 E(): 1.6e-160 Smith-Waterman score: 2936; 100.000% identity (100.000% similar) in 444 aa overlap (1-444:231-674) 10 20 30 KIAA10 FKEFLDLLGDTITLQDFKGFRGGLDVTHGQ :::::::::::::::::::::::::::::: gi|119 VGLRFNPVLYPKLFQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFKGFRGGLDVTHGQ 210 220 230 240 250 260 40 50 60 70 80 90 KIAA10 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI 270 280 290 300 310 320 100 110 120 130 140 150 KIAA10 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL 330 340 350 360 370 380 160 170 180 190 200 210 KIAA10 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES 390 400 410 420 430 440 220 230 240 250 260 270 KIAA10 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS 450 460 470 480 490 500 280 290 300 310 320 330 KIAA10 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI 510 520 530 540 550 560 340 350 360 370 380 390 KIAA10 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV 570 580 590 600 610 620 400 410 420 430 440 KIAA10 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH 630 640 650 660 670 >>gi|119610934|gb|EAW90528.1| GTPase activating Rap/RanG (675 aa) initn: 2936 init1: 2936 opt: 2936 Z-score: 3037.9 bits: 571.9 E(): 1.6e-160 Smith-Waterman score: 2936; 100.000% identity (100.000% similar) in 444 aa overlap (1-444:232-675) 10 20 30 KIAA10 FKEFLDLLGDTITLQDFKGFRGGLDVTHGQ :::::::::::::::::::::::::::::: gi|119 NNTFKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFKGFRGGLDVTHGQ 210 220 230 240 250 260 40 50 60 70 80 90 KIAA10 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI 270 280 290 300 310 320 100 110 120 130 140 150 KIAA10 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL 330 340 350 360 370 380 160 170 180 190 200 210 KIAA10 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES 390 400 410 420 430 440 220 230 240 250 260 270 KIAA10 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS 450 460 470 480 490 500 280 290 300 310 320 330 KIAA10 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI 510 520 530 540 550 560 340 350 360 370 380 390 KIAA10 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV 570 580 590 600 610 620 400 410 420 430 440 KIAA10 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH 630 640 650 660 670 >>gi|34530484|dbj|BAC85912.1| unnamed protein product [H (711 aa) initn: 2936 init1: 2936 opt: 2936 Z-score: 3037.5 bits: 571.9 E(): 1.7e-160 Smith-Waterman score: 2936; 100.000% identity (100.000% similar) in 444 aa overlap (1-444:268-711) 10 20 30 KIAA10 FKEFLDLLGDTITLQDFKGFRGGLDVTHGQ :::::::::::::::::::::::::::::: gi|345 NNTFKFGVIYQKARQTLEEELFGNNEESLAFKEFLDLLGDTITLQDFKGFRGGLDVTHGQ 240 250 260 270 280 290 40 50 60 70 80 90 KIAA10 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI 300 310 320 330 340 350 100 110 120 130 140 150 KIAA10 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL 360 370 380 390 400 410 160 170 180 190 200 210 KIAA10 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES 420 430 440 450 460 470 220 230 240 250 260 270 KIAA10 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS 480 490 500 510 520 530 280 290 300 310 320 330 KIAA10 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI 540 550 560 570 580 590 340 350 360 370 380 390 KIAA10 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV 600 610 620 630 640 650 400 410 420 430 440 KIAA10 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH 660 670 680 690 700 710 >>gi|156086740|ref|NP_001093868.1| GTPase activating Rap (715 aa) initn: 2936 init1: 2936 opt: 2936 Z-score: 3037.5 bits: 571.9 E(): 1.7e-160 Smith-Waterman score: 2936; 100.000% identity (100.000% similar) in 444 aa overlap (1-444:272-715) 10 20 30 KIAA10 FKEFLDLLGDTITLQDFKGFRGGLDVTHGQ :::::::::::::::::::::::::::::: gi|156 NNTFKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFKGFRGGLDVTHGQ 250 260 270 280 290 300 40 50 60 70 80 90 KIAA10 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI 310 320 330 340 350 360 100 110 120 130 140 150 KIAA10 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL 370 380 390 400 410 420 160 170 180 190 200 210 KIAA10 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES 430 440 450 460 470 480 220 230 240 250 260 270 KIAA10 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS 490 500 510 520 530 540 280 290 300 310 320 330 KIAA10 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI 550 560 570 580 590 600 340 350 360 370 380 390 KIAA10 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV 610 620 630 640 650 660 400 410 420 430 440 KIAA10 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH 670 680 690 700 710 >>gi|162416269|sp|Q684P5.2|RPGP2_HUMAN RecName: Full=Rap (730 aa) initn: 2936 init1: 2936 opt: 2936 Z-score: 3037.4 bits: 571.9 E(): 1.8e-160 Smith-Waterman score: 2936; 100.000% identity (100.000% similar) in 444 aa overlap (1-444:287-730) 10 20 30 KIAA10 FKEFLDLLGDTITLQDFKGFRGGLDVTHGQ :::::::::::::::::::::::::::::: gi|162 NNTFKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFKGFRGGLDVTHGQ 260 270 280 290 300 310 40 50 60 70 80 90 KIAA10 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI 320 330 340 350 360 370 100 110 120 130 140 150 KIAA10 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL 380 390 400 410 420 430 160 170 180 190 200 210 KIAA10 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES 440 450 460 470 480 490 220 230 240 250 260 270 KIAA10 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS 500 510 520 530 540 550 280 290 300 310 320 330 KIAA10 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI 560 570 580 590 600 610 340 350 360 370 380 390 KIAA10 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV 620 630 640 650 660 670 400 410 420 430 440 KIAA10 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH 680 690 700 710 720 730 >>gi|50949940|emb|CAH10514.1| hypothetical protein [Homo (715 aa) initn: 2930 init1: 2930 opt: 2930 Z-score: 3031.3 bits: 570.7 E(): 3.8e-160 Smith-Waterman score: 2930; 99.775% identity (99.775% similar) in 444 aa overlap (1-444:272-715) 10 20 30 KIAA10 FKEFLDLLGDTITLQDFKGFRGGLDVTHGQ :::::::::::::::::::::::::::::: gi|509 NNTFKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFKGFRGGLDVTHGQ 250 260 270 280 290 300 40 50 60 70 80 90 KIAA10 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI 310 320 330 340 350 360 100 110 120 130 140 150 KIAA10 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL 370 380 390 400 410 420 160 170 180 190 200 210 KIAA10 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES 430 440 450 460 470 480 220 230 240 250 260 270 KIAA10 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS 490 500 510 520 530 540 280 290 300 310 320 330 KIAA10 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI 550 560 570 580 590 600 340 350 360 370 380 390 KIAA10 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV 610 620 630 640 650 660 400 410 420 430 440 KIAA10 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH ::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|509 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASPGAGH 670 680 690 700 710 >>gi|51869679|emb|CAF31653.1| Rap1 GTPase activating pro (715 aa) initn: 2930 init1: 2930 opt: 2930 Z-score: 3031.3 bits: 570.7 E(): 3.8e-160 Smith-Waterman score: 2930; 99.775% identity (100.000% similar) in 444 aa overlap (1-444:272-715) 10 20 30 KIAA10 FKEFLDLLGDTITLQDFKGFRGGLDVTHGQ :::::::::::::::::.:::::::::::: gi|518 NNTFKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFNGFRGGLDVTHGQ 250 260 270 280 290 300 40 50 60 70 80 90 KIAA10 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI 310 320 330 340 350 360 100 110 120 130 140 150 KIAA10 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL 370 380 390 400 410 420 160 170 180 190 200 210 KIAA10 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES 430 440 450 460 470 480 220 230 240 250 260 270 KIAA10 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS 490 500 510 520 530 540 280 290 300 310 320 330 KIAA10 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI 550 560 570 580 590 600 340 350 360 370 380 390 KIAA10 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV 610 620 630 640 650 660 400 410 420 430 440 KIAA10 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH 670 680 690 700 710 >>gi|51869677|emb|CAF31652.1| Rap1 GTPase activating pro (730 aa) initn: 2930 init1: 2930 opt: 2930 Z-score: 3031.2 bits: 570.8 E(): 3.9e-160 Smith-Waterman score: 2930; 99.775% identity (100.000% similar) in 444 aa overlap (1-444:287-730) 10 20 30 KIAA10 FKEFLDLLGDTITLQDFKGFRGGLDVTHGQ :::::::::::::::::.:::::::::::: gi|518 NNTFKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFNGFRGGLDVTHGQ 260 270 280 290 300 310 40 50 60 70 80 90 KIAA10 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI 320 330 340 350 360 370 100 110 120 130 140 150 KIAA10 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL 380 390 400 410 420 430 160 170 180 190 200 210 KIAA10 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES 440 450 460 470 480 490 220 230 240 250 260 270 KIAA10 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS 500 510 520 530 540 550 280 290 300 310 320 330 KIAA10 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI 560 570 580 590 600 610 340 350 360 370 380 390 KIAA10 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFV 620 630 640 650 660 670 400 410 420 430 440 KIAA10 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|518 YSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH 680 690 700 710 720 730 >>gi|74187048|dbj|BAE20542.1| unnamed protein product [M (470 aa) initn: 2228 init1: 2228 opt: 2769 Z-score: 2867.4 bits: 539.8 E(): 5.1e-151 Smith-Waterman score: 2769; 93.708% identity (98.652% similar) in 445 aa overlap (1-444:26-470) 10 20 30 KIAA10 FKEFLDLLGDTITLQDFKGFRGGLDVTHGQTGVES ::::::::::::::::::::::::::::::::::: gi|741 FGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFKGFRGGLDVTHGQTGVES 10 20 30 40 50 60 40 50 60 70 80 90 KIAA10 VYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMIASNFL ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|741 VYTTFRDREIMFHVSTKLPFTDGDTQQLQRKRHIGNDIVAIIFQEENTPFVPDMIASNFL 70 80 90 100 110 120 100 110 120 130 140 150 KIAA10 HAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKLTNAEN :::::::...:::::::::::::::::::.:::::::::::::: ::::::::::::::: gi|741 HAYIVVQADNPGTETPSYKVSVTAREDVPAFGPPLPSPPVFQKGAEFREFLLTKLTNAEN 130 140 150 160 170 180 160 170 180 190 200 210 KIAA10 ACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLESFKRAI ::::::::::::::::::::::::::::.:::.:::.::::::::::::::::::::::: gi|741 ACCKSDKFAKLEDRTRAALLDNLHDELHTHTQVMLGMGPEEDKFENGGHGGFLESFKRAI 190 200 210 220 230 240 220 230 240 250 260 270 KIAA10 RVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQSRSPIK ::::::::::::.:.: :.:..:::::::: :::::::::::::::.:::.::::::::: gi|741 RVRSHSMETMVGSQRKLHGGNLPGSLSGGIVHNSMEVTKTTFSPPVAAATAKNQSRSPIK 250 260 270 280 290 300 280 290 300 310 320 330 KIAA10 RRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEICPNKE ::::::::::.:::::::::.::::.:::::::::::::::::::::::::::::::::: gi|741 RRSGLFPRLHSGSEGQGDSRTRCDSASSTPKTPDGGHSSQEIKSETSSNPSSPEICPNKE 310 320 330 340 350 360 340 350 360 370 380 390 KIAA10 KPFMKLKENGRA-ISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVFVYSPS :::.:::::::: :::::::::: :::::::::::: :::.::::::::::::::.:::: gi|741 KPFIKLKENGRANISRSSSSTSSFSSTAGEGEAMEECDSGSSQPSTTSPFKQEVFAYSPS 370 380 390 400 410 420 400 410 420 430 440 KIAA10 PSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH ::::::::::::::::::::::::::::::::::::::::::::::.::: gi|741 PSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSSAGH 430 440 450 460 470 >>gi|76825585|gb|AAI07389.1| Garnl4 protein [Mus musculu (518 aa) initn: 2228 init1: 2228 opt: 2769 Z-score: 2866.8 bits: 539.8 E(): 5.6e-151 Smith-Waterman score: 2769; 93.708% identity (98.652% similar) in 445 aa overlap (1-444:74-518) 10 20 30 KIAA10 FKEFLDLLGDTITLQDFKGFRGGLDVTHGQ :::::::::::::::::::::::::::::: gi|768 NNTFKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFKGFRGGLDVTHGQ 50 60 70 80 90 100 40 50 60 70 80 90 KIAA10 TGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMI :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|768 TGVESVYTTFRDREIMFHVSTKLPFTDGDTQQLQRKRHIGNDIVAIIFQEENTPFVPDMI 110 120 130 140 150 160 100 110 120 130 140 150 KIAA10 ASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKL ::::::::::::...:::::::::::::::::::.:::::::::::::: :::::::::: gi|768 ASNFLHAYIVVQADNPGTETPSYKVSVTAREDVPAFGPPLPSPPVFQKGAEFREFLLTKL 170 180 190 200 210 220 160 170 180 190 200 210 KIAA10 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENGGHGGFLES :::::::::::::::::::::::::::::::::.:::.:::.:::::::::::::::::: gi|768 TNAENACCKSDKFAKLEDRTRAALLDNLHDELHTHTQVMLGMGPEEDKFENGGHGGFLES 230 240 250 260 270 280 220 230 240 250 260 270 KIAA10 FKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQS :::::::::::::::::.:.: :.:..:::::::: :::::::::::::::.:::.:::: gi|768 FKRAIRVRSHSMETMVGSQRKLHGGNLPGSLSGGIVHNSMEVTKTTFSPPVAAATAKNQS 290 300 310 320 330 340 280 290 300 310 320 330 KIAA10 RSPIKRRSGLFPRLHTGSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI :::::::::::::::.:::::::::.::::.::::::::::::::::::::::::::::: gi|768 RSPIKRRSGLFPRLHSGSEGQGDSRTRCDSASSTPKTPDGGHSSQEIKSETSSNPSSPEI 350 360 370 380 390 400 340 350 360 370 380 KIAA10 CPNKEKPFMKLKENGRA-ISRSSSSTSSVSSTAGEGEAMEEGDSGGSQPSTTSPFKQEVF ::::::::.:::::::: :::::::::: :::::::::::: :::.:::::::::::::: gi|768 CPNKEKPFIKLKENGRANISRSSSSTSSFSSTAGEGEAMEECDSGSSQPSTTSPFKQEVF 410 420 430 440 450 460 390 400 410 420 430 440 KIAA10 VYSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSGAGH .::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|768 AYSPSPSSESPSLGAAATPIIMSRSPTDAKSRNSPRSNLKFRFDKLSHASSSAGH 470 480 490 500 510 444 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 14:58:11 2009 done: Tue Mar 3 15:02:50 2009 Total Scan time: 1553.700 Total Display time: 0.180 Function used was FASTA [version 34.26.5 April 26, 2007]