# /usr/local/bin/fasta34 -b50 -d10 -E0.01 -H -O./tmp/fh02134.fasta.huge -Q ../query/KIAA1037.ptfa ./tmplib.24314 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 KIAA1037, 488 aa
 vs ./tmplib.24314 library

1987017 residues in  2037 sequences
  Expectation_n fit: rho(ln(x))= 3.6437+/-0.00486; mu= 22.2282+/- 0.332
 mean_var=84.7410+/-19.814, 0's: 0 Z-trim: 4  B-trim: 7 in 1/39
 Lambda= 0.139324

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 37, opt: 25, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(2037)
KIAA0719  ( 624 res)   hk01141                     ( 624)  197 49.5   8e-07


>>KIAA0719  ( 624 res)   hk01141                          (624 aa)
 initn: 119 init1:  93 opt: 197  Z-score: 214.4  bits: 49.5 E(): 8e-07
Smith-Waterman score: 204;  28.704% identity (55.556% similar) in 216 aa overlap (222-414:88-295)

             200       210       220       230       240       250 
KIAA10 QRPYTFLLPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHVSPQVELP-
                                     : ..::. .:.  . ::.:.  .:    : 
KIAA07 ALAVGAPLLLGAGAIYLWSRQQRRREARGRGDASGLKRNSER-KTPEGRASPAPGSGHPE
        60        70        80        90        100       110      

                         260       270       280            290    
KIAA10 -P-------YLERV---KQQANEAFACQQWTQAIQLYSKAVQRAPHN-----AMLYGNRA
        :        :.:.   :...:. :   .. :::: :..:..  : .     . .: :::
KIAA07 GPGAHLDMNSLDRAQAAKNKGNKYFKAGKYEQAIQCYTEAISLCPTEKNVDLSTFYQNRA
        120       130       140       150       160       170      

           300       310       320       330       340       350   
KIAA10 AAYMK-RKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGK
       ::. . .::     .. .:: ::. ::: ..:: :: :.   .:    .  :::.:  . 
KIAA07 AAFEQLQKWK----EVAQDCTKAVELNPKYVKALFRRAKAHEKLD---NKKECLEDVTAV
        180           190       200       210          220         

           360       370       380          390         400        
KIAA10 FPEQAHSSACDALGRDITAALFSKNDGEEK---KGPGGGAPVRLRS--TSRKDSISEDEM
          .. ..  . :  : .  :..:. ..::   . :   .:  ..:  .:  :.:  . :
KIAA07 CILEGFQNQQSMLLADKVLKLLGKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPM
     230       240       250       260       270       280         

      410       420       430       440       450       460        
KIAA10 VLRERSYDYQFRYCGHCNTTTDIKEANFFGRSEALKRRVQPSWQREVEWGVLGHNGFREE
       .  :.:                                                      
KIAA07 LKGEKSDEDKDKEGEALEVKENSGYLKAKQYMEEENYDKIISECSKEIDAEGKYMAEALL
     290       300       310       320       330       340         




488 residues in 1 query   sequences
1987017 residues in 2037 library sequences
 Scomplib [34.26]
 start: Thu Dec 18 15:06:42 2008 done: Thu Dec 18 15:06:43 2008
 Total Scan time:  0.440 Total Display time:  0.010

Function used was FASTA [version 34.26.5 April 26, 2007]