hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15124991/chunk_1/iprscan-20080501-15124991.nocrc
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Query sequence: KIAA1023
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00612.17.fs IQ calmodulin-binding motif                     46.4    8.9e-13   3
PF00612.17.ls IQ calmodulin-binding motif                     50.5    5.2e-12   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00612.17.fs   2/3     514   534 ..     1    21 []    22.0  1.7e-05
PF00612.17.ls   2/3     514   534 ..     1    21 []    24.0  0.00049
PF00612.17.fs   3/3     573   593 ..     1    21 []    21.8    2e-05
PF00612.17.ls   3/3     573   593 ..     1    21 []    23.8  0.00057

Alignments of top-scoring domains:
PF00612.17.fs: domain 2 of 3, from 514 to 534: score 22.0, E = 1.7e-05
                   *->rraaikIQaawRGylaRkryk<-*
                       +aa+++Qaa+RG+l+R ++    
    KIAA1023   514    DEAAVVLQAAFRGHLTRTKLL    534  

PF00612.17.ls: domain 2 of 3, from 514 to 534: score 24.0, E = 0.00049
                   *->rraaikIQaawRGylaRkryk<-*
                       +aa+++Qaa+RG+l+R ++    
    KIAA1023   514    DEAAVVLQAAFRGHLTRTKLL    534  

PF00612.17.fs: domain 3 of 3, from 573 to 593: score 21.8, E = 2e-05
                   *->rraaikIQaawRGylaRkryk<-*
                      ++a+++IQ+a R++laR r+    
    KIAA1023   573    EEAIVIIQSALRAHLARARHS    593  

PF00612.17.ls: domain 3 of 3, from 573 to 593: score 23.8, E = 0.00057
                   *->rraaikIQaawRGylaRkryk<-*
                      ++a+++IQ+a R++laR r+    
    KIAA1023   573    EEAIVIIQSALRAHLARARHS    593  

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