hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15110162/chunk_1/iprscan-20080501-15110162.nocrc
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Query sequence: KIAA1022
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00536.20.fs SAM domain (Sterile alpha motif)                91.3      3e-26   1
PF00536.20.ls SAM domain (Sterile alpha motif)                93.2    7.1e-25   1
PF07647.7.fs SAM domain (Sterile alpha motif)                79.4    1.2e-22   1
PF07647.7.ls SAM domain (Sterile alpha motif)                81.4    2.7e-21   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07647.7.fs   1/1    1065  1131 .]     1    72 []    79.4  1.2e-22
PF07647.7.ls   1/1    1065  1131 .]     1    72 []    81.4  2.7e-21
PF00536.20.fs   1/1    1066  1129 ..     1    65 []    91.3    3e-26
PF00536.20.ls   1/1    1066  1129 ..     1    65 []    93.2  7.1e-25

Alignments of top-scoring domains:
PF07647.7.fs: domain 1 of 1, from 1065 to 1131: score 79.4, E = 1.2e-22
                   *->veswslesvaeWLesiglegqYkdnFsdqgitglellllrlteedLa
                      v+ w+ ++va+WLes++l g++k++F+d++i+g ++l ++l  edL 
    KIAA1022  1065    VHLWTKPDVADWLESLNL-GEHKEAFMDNEIDG-SHL-PNLQKEDL- 1107 

                   klalGitsvghRkkilkkiqelkqq<-*
                   + +lG+t vghR  i +++++l+++   
    KIAA1022  1108 I-DLGVTRVGHRMNIERALKQLLDR    1131 

PF07647.7.ls: domain 1 of 1, from 1065 to 1131: score 81.4, E = 2.7e-21
                   *->veswslesvaeWLesiglegqYkdnFsdqgitglellllrlteedLa
                      v+ w+ ++va+WLes++l g++k++F+d++i+g ++l ++l  edL 
    KIAA1022  1065    VHLWTKPDVADWLESLNL-GEHKEAFMDNEIDG-SHL-PNLQKEDL- 1107 

                   klalGitsvghRkkilkkiqelkqq<-*
                   + +lG+t vghR  i +++++l+++   
    KIAA1022  1108 I-DLGVTRVGHRMNIERALKQLLDR    1131 

PF00536.20.fs: domain 1 of 1, from 1066 to 1129: score 91.3, E = 3e-26
                   *->dgwsfesVgeWLesiglgqYidnFlsagyidgdtllqlteeDLedlG
                      + w+  +V++WLes+ lg+++++F + ++idg++l++l +eDL dlG
    KIAA1022  1066    HLWTKPDVADWLESLNLGEHKEAF-MDNEIDGSHLPNLQKEDLIDLG 1111 

                   vtllGHrkKIlssIqgLk<-*
                   vt++GHr+ I +++++L    
    KIAA1022  1112 VTRVGHRMNIERALKQLL    1129 

PF00536.20.ls: domain 1 of 1, from 1066 to 1129: score 93.2, E = 7.1e-25
                   *->dgwsfesVgeWLesiglgqYidnFlsagyidgdtllqlteeDLedlG
                      + w+  +V++WLes+ lg+++++F + ++idg++l++l +eDL dlG
    KIAA1022  1066    HLWTKPDVADWLESLNLGEHKEAF-MDNEIDGSHLPNLQKEDLIDLG 1111 

                   vtllGHrkKIlssIqgLk<-*
                   vt++GHr+ I +++++L    
    KIAA1022  1112 VTRVGHRMNIERALKQLL    1129 

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