hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-15092015/chunk_1/iprscan-20080501-15092015.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1021 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00702.16.fs haloacid dehalogenase-like hydrolase 28.6 7.8e-08 3 PF00702.16.ls haloacid dehalogenase-like hydrolase 15.9 0.0021 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00702.16.ls 1/1 376 814 .. 1 183 [] 15.9 0.0021 Alignments of top-scoring domains: PF00702.16.ls: domain 1 of 1, from 376 to 814: score 15.9, E = 0.0021 *->ikavvFDkDGTLtdgk............................... + ++ Dk+GTLt+ + + ++ +++ ++ +++ +++++ + KIAA1021 376 VEYIFTDKTGTLTENNmefkeccieghvyvphvicngqvlpessgid 422 .................................................. +++++ +++++++ + ++ + +++++ ++++++++++++ KIAA1021 423 midsspsvngrereelffralclchtvqvkdddsvdgprkspdggkscvy 472 ..eppiaeaiveaaaelgl.......lpleevekllgrgl.g.erilleg ++ p + a+ve ++lg + + ++ +e++++ + + ++il + KIAA1021 473 isSSPDEVALVEGVQRLGFtylrlkdNYMEILNRENHIERfElLEILSFD 522 gltaell........................................... +++++ ++ +++ ++ +++ ++ +++ + + + +++ + KIAA1021 523 SVRRRMSvivksatgeiylfckgadssifprviegkvdqirarvernave 572 ...............................................d.e + ++ ++ ++ ++ + + +++++ + + ++d KIAA1021 573 glrtlcvaykrliqeeyegickllqaakvalqdrekklaeayeqiekDlT 622 vlglial.dklypgarealkaLkrrGikvailTggdr.naeallealgla +lg+ a++d+l + a+++++aL+++Gikv++lTg+ ++a+a a+ l+ KIAA1021 623 LLGATAVeDRLQEKAADTIEALQKAGIKVWVLTGDKMeTAAATCYACKLF 672 .lfdviidsdevggvgpivvgKPkpeifllalerlgvkpeevg....... + ++ + + + ++ +l +l + + + +++ ++++ KIAA1021 673 rRNTQLLELTTKR---------IEEQSLHDVLFELSKTVLRHSgsltrdn 713 .................................................. ++ + + ++ + ++ + ++++++++++ ++ + ++ + KIAA1021 714 lsglsadmqdygliidgaalslimkpredgssgnyrelfleicrscsavl 763 .....................pe.vlmVGDgvnDapalaaAGvgvamgng + + ++ + + + +++ +l++GDg nD+ ++ A+vg+ + KIAA1021 764 ccrmaplqkaqivklikfskeHPiTLAIGDGANDVSMILEAHVGIGVIGK 813 g<-* KIAA1021 814 E 814 //