hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-14510231/chunk_1/iprscan-20080501-14510231.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1011 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00150 395.4 3.3e-114 14 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00150 1/14 320 415 .. 1 104 [] 2.0 5.7 SM00150 2/14 1475 1574 .. 1 104 [] 8.1 1.6 SM00150 3/14 1581 1686 .. 1 104 [] 33.4 3.2e-05 SM00150 4/14 1696 1800 .. 1 104 [] 27.5 0.0019 SM00150 5/14 1807 1907 .. 1 104 [] 16.1 0.31 SM00150 6/14 1913 2015 .. 1 104 [] 8.7 1.4 SM00150 7/14 2230 2330 .. 1 104 [] 16.8 0.26 SM00150 8/14 2447 2547 .. 1 104 [] 10.1 1.1 SM00150 9/14 2554 2652 .. 1 104 [] 48.6 8.4e-10 SM00150 10/14 2659 2766 .. 1 104 [] 54.2 1.6e-11 SM00150 11/14 2773 2875 .. 1 104 [] 52.6 5.2e-11 SM00150 12/14 2882 2982 .. 1 104 [] 48.5 9e-10 SM00150 13/14 3211 3314 .. 1 104 [] 48.6 8.1e-10 SM00150 14/14 3321 3425 .. 1 104 [] 20.3 0.13 Alignments of top-scoring domains: SM00150: domain 1 of 14, from 320 to 415: score 2.0, E = 5.7 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea + r+++e+ + l + e++l+++ ++e+ ++ ++ + KIAA1011 320 YAMRRKIEEINNGLHNVEKMLQQKSK-------NIEKAQEIQKKMWD 359 elaaheervdalnelgeqLieesghpdaeeIeerleeln...erWeeLle el+ ++ ++++l+ + ++++e+ d + +e++++l + ++++++ + KIAA1011 360 ELDLWHSKLNELDSEVQDIVEQ----DPGQAQEWMDNLMipfQQYQQVSQ 405 laeeRrqkLe<-* +ae R +L+ KIAA1011 406 RAECRTSQLN 415 SM00150: domain 2 of 14, from 1475 to 1574: score 8.1, E = 1.6 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea ++F ++ + le+ le l s l + ++e + + + q++++ KIAA1011 1475 EEFDENYASLEKDLEILISTLPSVSLV-EETEERLVERISFYQQIKR 1520 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae + +++r+ + ++g+qL+++ +e+e ++++l+e+W +L ++ + KIAA1011 1521 NIGGKHARLYQTLNEGKQLVAS---VSCPELEGQIAKLEEQWLSLNKKID 1567 eRrqkLe<-* ++L+ KIAA1011 1568 HELHRLQ 1574 SM00150: domain 3 of 14, from 1581 to 1686: score 33.4, E = 3.2e-05 *->qqFlrdadeleaWleeke.....qllssedlgeskDlesveallkkH ++rd d+l +Wle+ +++ + +s ++ +Dl+++++ + + KIAA1011 1581 LSYNRDSDQLTKWLESSQhtlnyWKEQSLNVS--QDLDTIRSNINNF 1625 qaleaelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeL ++ +e++++ a++ g+qL+ ++ d +++++ l++ +++W L KIAA1011 1626 FEFSKEVDEKSSLKTAVISIGNQLLHL-KETDTATLRASLAQFEQKWTML 1674 lelaeeRrqkLe<-* ++ + ++kL KIAA1011 1675 ITQLPDIQEKLH 1686 SM00150: domain 4 of 14, from 1696 to 1800: score 27.5, E = 0.0019 *->qqFlrdadeleaWleeke.qllssedlgeskDlesveallkkHqale ++ ++ e+++W+++ e+q + + + + ++v+ ll+kH++++ KIAA1011 1696 RK---AITEMISWMNNVEhQTSDEDSVHSPSSASQVKHLLQKHKEFR 1739 aelaaheervdalnelgeqLiee...sghpdaeeIeerleelnerWeeLl e++ ++ vd +n+ qL + +s+ ++ e e+l e+n++W++++ KIAA1011 1740 MEMDYKQWIVDFVNQSLLQLSTCdveSKRYERTEFAEHLGEMNRQWHRVH 1789 elaeeRrqkLe<-* ++ ++ q+Le KIAA1011 1790 GMLNRKIQHLE 1800 SM00150: domain 5 of 14, from 1807 to 1907: score 16.1, E = 0.31 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea + +++ l +Wle +e+ l++ + ++ sv++ll +q++e+ KIAA1011 1807 TESENKIQILNNWLEAQEERLKTLQKP--ESVISVQKLLLDCQDIEN 1851 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae la + +d+l++ L + p e+ r++el +++ ++l ++ KIAA1011 1852 QLAIKSKALDELKQSYLTLESG-AVPLLEDTASRIDELFQKRSSVLTQVN 1900 eRrqkLe<-* + + + KIAA1011 1901 QLKTSMQ 1907 SM00150: domain 6 of 14, from 1913 to 2015: score 8.7, E = 1.4 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea ++ ++ + ++ + ++ +++ +++ +le+++ + + +q l++ KIAA1011 1913 WKIYDQLYDEVNMMTIRFWYCMEHSKPVVLSLETLRCQVENLQSLQD 1959 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae e + e + ++l+e +L+ ++ ae Iee++++ ++rW ++ ++ + KIAA1011 1960 EAESSEGSWEKLQEVIGKLKGL-CPSVAEIIEEKCQNTHKRWTQVNQAIA 2008 eRrqkLe<-* ++ qk + KIAA1011 2009 DQLQKAQ 2015 SM00150: domain 7 of 14, from 2230 to 2330: score 16.8, E = 0.26 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea ++Fl ++ ++ le e++l+ + ++l+++ +++k + lea KIAA1011 2230 EKFLYCCEKWIQLLEKIEEALKVDVA---NSLPELLEQQKTYKMLEA 2273 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae e++ ++ d+ + qL++ + ++ +e +l +rW++ + ++ KIAA1011 2274 EVSINQTIADSYVTQSLQLLDTTEIENRPEFITEFSKLTDRWQNAVQGVR 2323 eRrqkLe<-* +R+ + KIAA1011 2324 QRKGDVD 2330 SM00150: domain 8 of 14, from 2447 to 2547: score 10.1, E = 1.1 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea q ++++el++ l+ + + s ++l+ e++ + + ++le+ KIAA1011 2447 DQCEKKIKELKSRLQVLK-AQSEDPLP--ELHEDLHNEKELIKELEQ 2490 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae la + + +++l+ + +L + +d ++e++e+l+++We+L+ +++ KIAA1011 2491 SLASWTQNLKELQTMKADLTRHVLVEDVMVLKEQIEHLHRQWEDLCLRVA 2540 eRrqkLe<-* R+q e KIAA1011 2541 IRKQEIE 2547 SM00150: domain 9 of 14, from 2554 to 2652: score 48.6, E = 8.4e-10 *->qqFlrdadeleaWleeke.qllssedlgeskDlesveallkkHqale F+++ +el aWl +e+++l++ d+ +e +e+l+k + + KIAA1011 2554 VVFNEKNKELCAWLVQMEnKVLQTADI---SIEEMIEKLQK---DCM 2594 aelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlela +e++ e +l+++g+qLi++s+ a+eI ++l+++n+rW++L + KIAA1011 2595 EEINLFSENKLQLKQMGDQLIKASNKSRAAEIDDKLNKINDRWQHLFDVI 2644 eeRrqkLe<-* R +kL+ KIAA1011 2645 GSRVKKLK 2652 SM00150: domain 10 of 14, from 2659 to 2766: score 54.2, E = 1.6e-11 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea qq+ +++ l Wl e ls + ++ D +++++ l ++q+l++ KIAA1011 2659 QQLDKNMSNLRTWLARIESELSKPVVYDVCDDQEIQKRLAEQQDLQR 2705 elaaheervdalnelgeqLiee....sghpdaeeIeerleelnerWeeLl ++++h + v+++ + ++ L+ +++ +++ + ++I++ + l++rW++++ KIAA1011 2706 DIEQHSAGVESVFNICDVLLHDsdacANETECDSIQQTTRSLDRRWRNIC 2755 elaeeRrqkLe<-* +++ eRr k e KIAA1011 2756 AMSMERRMKIE 2766 SM00150: domain 11 of 14, from 2773 to 2875: score 52.6, E = 5.2e-11 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea q+Fl+d +e+Wl+++e+ ++ + + +s+++ lk+++a+++ KIAA1011 2773 QKFLDDYSRFEDWLKSAERTAACPNSS-EVLYTSAKEELKRFEAFQR 2818 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae + ++ +++ +n++ ++L +e + a +++ ++e n+rW++L++++ KIAA1011 2819 QIHERLTQLELINKQYRRLARENRTDTASRLKQMVHEGNQRWDNLQRRVT 2868 eRrqkLe<-* + ++L KIAA1011 2869 AVLRRLR 2875 SM00150: domain 12 of 14, from 2882 to 2982: score 48.5, E = 9e-10 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea ++F + ++ Wl+e+ +l+ ++ +++++ ++++++ +++ KIAA1011 2882 EEFEGTRESILVWLTEMDLQLTNVEH---FSESDADDKMRQLNGFQQ 2925 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae e++ + +++d+l+ geqLi++s++ da Ie+ leel++ +e+ ++ KIAA1011 2926 EITLNTNKIDQLIVFGEQLIQKSEPLDAVLIEDELEELHRYCQEVFGRVS 2975 eRrqkLe<-* + +++L KIAA1011 2976 RFHRRLT 2982 SM00150: domain 13 of 14, from 3211 to 3314: score 48.6, E = 8.1e-10 *->qqFlrdadeleaWleeke...qllssedlgeskDlesveallkkHqa qq+++d+ + Wl+ +e + ++l+ ++ D++++e k++q+ KIAA1011 3211 QQLNSDISAITTWLKKTEaelEMLKMAKPP--SDIQEIELRVKRLQE 3255 leaelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLle + + +++++ v ++n +++++ + p++ e++ rl++l We+ + KIAA1011 3256 ILKAFDTYKALVVSVNVSSKEFLQT-ESPESTELQSRLRQLSLLWEAAQG 3304 laeeRrqkLe<-* +++ +r L KIAA1011 3305 AVDSWRGGLR 3314 SM00150: domain 14 of 14, from 3321 to 3425: score 20.3, E = 0.13 *->qqFlrdadeleaWleeke...qllssedlgeskDlesveallkkHqa q F++ + l+ Wl ++++++q + +d+ D+ ++ + +++ + KIAA1011 3321 QDFHQLSQNLLLWLASAKnrrQKAHVTDPK--ADPRALLECRRELMQ 3365 leaelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLle le+el +++++vd l+e + L+ + +++d e ee+++ ++++ ++L+e KIAA1011 3366 LEKELVERQPQVDMLQEISNSLLIKGHGEDCIEAEEKVHVIEKKLKQLRE 3415 laeeRrqkLe<-* ++ + +L+ KIAA1011 3416 QVSQDLMALQ 3425 //