hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-19011302/chunk_1/iprscan-20080502-19011302.nocrc
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Query sequence: KIAA0996
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00096.16.fs Zinc finger, C2H2 type                          23.5    0.00013   1
PF00096.16.ls Zinc finger, C2H2 type                          25.5    0.00018   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00096.16.fs   1/1     219   242 ..     1    24 []    23.5  0.00013
PF00096.16.ls   1/1     219   242 ..     1    24 []    25.5  0.00018

Alignments of top-scoring domains:
PF00096.16.fs: domain 1 of 1, from 219 to 242: score 23.5, E = 0.00013
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                      y+C+  C+k+F +++ L++H++++H   
    KIAA0996   219    YQCH-FCDKAFMNQAFLQSHIQRrH    242  

PF00096.16.ls: domain 1 of 1, from 219 to 242: score 25.5, E = 0.00018
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                      y+C+  C+k+F +++ L++H++++H   
    KIAA0996   219    YQCH-FCDKAFMNQAFLQSHIQRrH    242  

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