hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-18530000/chunk_1/iprscan-20080502-18530000.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0991 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00735.9.fs Septin 499.5 9.3e-148 1 PF00735.9.ls Septin 501.3 1e-147 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00735.9.fs 1/1 339 618 .. 1 292 [] 499.5 9.3e-148 PF00735.9.ls 1/1 339 618 .. 1 292 [] 501.3 1e-147 Alignments of top-scoring domains: PF00735.9.fs: domain 1 of 1, from 339 to 618: score 499.5, E = 9.3e-148 *->kGfdFTLMVVGeSGLGKtTlINTLFltdLiranlanDsreipgpsEt Gf+F++MVVG+SGLGK+TlINTLF +++ r +p+ +E KIAA0991 339 QGFEFNIMVVGQSGLGKSTLINTLFKSKISRK------SVQPTSEE- 378 kikktveIkeatkveiEEdGvkLnLtViDTPGFGDaiDNsncWkPIveYI +i kt eIk + ++ iEE+Gv+ +LtViDTPGFGD i+N+ncW+PI ++I KIAA0991 379 RIPKTIEIK-SITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFI 427 deQfdqYLraEsrinRntkivDnRVHcCLYFIsPtGHgLkpLDvefMKkL ++Q++ YL++E++inR ++i D+RVHcCLYFI+ tGH+L+pLD+efMK+L KIAA0991 428 NDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRL 477 sekVNlIPVIAKADtLTadElqefKkrIredIeaqkIkIYkFPPdeeede s+ VN++PVIAKADtLT++E+ +fK+rI +d+ +I++Y+ e de KIAA0991 478 SKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYP---QKEFDE 524 DEefketteqLkssiPFAIvGSnteiengdGekVRGRkYPWGvVEVENps D+e + +e+ ++ iPFA+vGS+ e++ +G+++ GRk++WG++EVEN + KIAA0991 525 DSEDRLVNEKFREMIPFAVVGSDHEYQV-NGKRILGRKTKWGTIEVENTT 573 HCDFvkLRnlLirtHLqDLkevThellYEnYRsekLsalgrkadn<-* HC+F LR+lLirtH+q k++T+ ++ E YR ++L +++++ n KIAA0991 574 HCEFAYLRDLLIRTHMQNIKDITSSIHFEAYRVKRLNEGSSAMAN 618 PF00735.9.ls: domain 1 of 1, from 339 to 618: score 501.3, E = 1e-147 *->kGfdFTLMVVGeSGLGKtTlINTLFltdLiranlanDsreipgpsEt Gf+F++MVVG+SGLGK+TlINTLF +++ r +p+ +E KIAA0991 339 QGFEFNIMVVGQSGLGKSTLINTLFKSKISRK------SVQPTSEE- 378 kikktveIkeatkveiEEdGvkLnLtViDTPGFGDaiDNsncWkPIveYI +i kt eIk + ++ iEE+Gv+ +LtViDTPGFGD i+N+ncW+PI ++I KIAA0991 379 RIPKTIEIK-SITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFI 427 deQfdqYLraEsrinRntkivDnRVHcCLYFIsPtGHgLkpLDvefMKkL ++Q++ YL++E++inR ++i D+RVHcCLYFI+ tGH+L+pLD+efMK+L KIAA0991 428 NDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRL 477 sekVNlIPVIAKADtLTadElqefKkrIredIeaqkIkIYkFPPdeeede s+ VN++PVIAKADtLT++E+ +fK+rI +d+ +I++Y+ e de KIAA0991 478 SKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYP---QKEFDE 524 DEefketteqLkssiPFAIvGSnteiengdGekVRGRkYPWGvVEVENps D+e + +e+ ++ iPFA+vGS+ e++ +G+++ GRk++WG++EVEN + KIAA0991 525 DSEDRLVNEKFREMIPFAVVGSDHEYQV-NGKRILGRKTKWGTIEVENTT 573 HCDFvkLRnlLirtHLqDLkevThellYEnYRsekLsalgrkadn<-* HC+F LR+lLirtH+q k++T+ ++ E YR ++L +++++ n KIAA0991 574 HCEFAYLRDLLIRTHMQNIKDITSSIHFEAYRVKRLNEGSSAMAN 618 //