hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18480362/chunk_1/iprscan-20080502-18480362.nocrc
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Query sequence: KIAA0988
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.fs HEAT repeat                                     38.8    6.7e-10   7
PF02985.12.ls HEAT repeat                                     42.5    1.4e-09   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.ls   1/5     374   409 ..     1    36 []    23.8  0.00056

Alignments of top-scoring domains:
PF02985.12.ls: domain 1 of 5, from 374 to 409: score 23.8, E = 0.00056
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e++  ++++ ll +l+D+d  VR +Aa+ +g++a  l   
    KIAA0988   374    EgVE-RVIEQLLVGLKDKDTVVRWSAAKGIGRMAGRL    409  

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