hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18412460/chunk_1/iprscan-20080502-18412460.nocrc
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Query sequence: KIAA0984
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00566.9.fs TBC domain                                      77.7    2.5e-21   1
PF00566.9.ls TBC domain                                      69.5      1e-17   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00566.9.ls   1/1      50   283 ..     1   219 []    69.5    1e-17
PF00566.9.fs   1/1     125   283 ..    75   219 .]    77.7  2.5e-21

Alignments of top-scoring domains:
PF00566.9.ls: domain 1 of 1, from 50 to 283: score 69.5, E = 1e-17
                   *->vkeGvpsstrakVWavcsgAyqlrYAsageYerll......rrgdek
                         G p   r kVW+ +    +l+   a    + ++ + ++r ++  
    KIAA0984    50    LSTGIPKEWRRKVWLTLAD-HYLH-SIAIDWDKTMrftfneRSNPDD 94   

                   esqavdkIekDvkRtLvkesaFqsrGKGegisk..LrrvLvAYswknPdv
                    s  + +I kD+ Rt    s +   G+   + +  L+rvL AY + n  v
    KIAA0984    95 DSMGI-QIVKDLHRT--GCSSYC--GQEAEQDRvvLKRVLLAYARWNKTV 139  

                   gYcQGMNVvaApfLllyk.SEeqAFyfLdrLlenvvPlKYylpdldGvrl
                   gYcQG N++aA  L  + + E +A  ++  L++ v+P  Y+  +l     
    KIAA0984   140 GYCQGFNILAALILEVMEgNEGDALKIMIYLIDKVLPESYFVNNLRALSV 189  

                   DqkvLdsfveellprLYeYLlskgvdl.............kvvsLpwfLs
                   D  v+   +  +lp+L  +L  +  +++++++++ +++ + v  + wfL+
    KIAA0984   190 DMAVFRDLLRMKLPELSQHLDTLQRTAnkesgggyeppltNVFTMQWFLT 239  

                   LyattlPleeAlrIfDiLFadGivllfrvaLAvLkilkeqiLda<-*
                   L+at lP    l+I+D  F +G+ + +rv LA+   l eqi  +   
    KIAA0984   240 LFATCLPNQTVLKIWDSVFFEGSEIILRVSLAIWAKLGEQIECC    283  

PF00566.9.fs: domain 1 of 1, from 125 to 283: score 77.7, E = 2.5e-21
                   *->LrrvLvAYswknPdvgYcQGMNVvaApfLllyk.SEeqAFyfLdrLl
                      L+rvL AY + n  vgYcQG N++aA  L  + + E +A  ++  L+
    KIAA0984   125    LKRVLLAYARWNKTVGYCQGFNILAALILEVMEgNEGDALKIMIYLI 171  

                   envvPlKYylpdldGvrlDqkvLdsfveellprLYeYLlskgvdl.....
                   + v+P  Y+  +l     D  v+   +  +lp+L  +L  +  +++++++
    KIAA0984   172 DKVLPESYFVNNLRALSVDMAVFRDLLRMKLPELSQHLDTLQRTAnkesg 221  

                   ........kvvsLpwfLsLyattlPleeAlrIfDiLFadGivllfrvaLA
                   ++ +++ + v  + wfL+L+at lP    l+I+D  F +G+ + +rv LA
    KIAA0984   222 ggyeppltNVFTMQWFLTLFATCLPNQTVLKIWDSVFFEGSEIILRVSLA 271  

                   vLkilkeqiLda<-*
                   +   l eqi  +   
    KIAA0984   272 IWAKLGEQIECC    283  

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