hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18345243/chunk_1/iprscan-20080502-18345243.nocrc
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Query sequence: KIAA0980
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00054                                                  44.9    1.1e-08   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00054    1/3      35    63 ..     1    29 []     8.1       16
SM00054    2/3     224   252 ..     1    29 []     4.8       41
SM00054    3/3     261   289 ..     1    29 []    32.0  8.1e-05

Alignments of top-scoring domains:
SM00054: domain 1 of 3, from 35 to 63: score 8.1, E = 16
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      +l+e+ +  D+ g G++d +E+ +l+ +l   
    KIAA0980    35    QLREVYSSCDTTGTGFLDRQELTQLCLKL    63   

SM00054: domain 2 of 3, from 224 to 252: score 4.8, E = 41
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      +++ +++e+ +  +G ++ +E+ ++++s+   
    KIAA0980   224    QIRGVWEELGVGSSGHLSEQELAVVCQSV    252  

SM00054: domain 3 of 3, from 261 to 289: score 32.0, E = 8.1e-05
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      el+++F+++D+DgdGk+++eEf+ +l s    
    KIAA0980   261    ELEDLFNKLDQDGDGKVSLEEFQLGLFSH    289  

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