hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18345243/chunk_1/iprscan-20080502-18345243.nocrc
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Query sequence: KIAA0980
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00036.22.ls EF hand                                         56.9    6.3e-14   3
PF00036.22.fs EF hand                                         52.8    2.3e-13   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00036.22.fs   1/4      35    63 ..     1    29 []    15.2   0.0042
PF00036.22.fs   4/4     261   289 ..     1    29 []    31.4  1.6e-07
PF00036.22.ls   3/3     261   289 ..     1    29 []    33.4  7.2e-07

Alignments of top-scoring domains:
PF00036.22.fs: domain 1 of 4, from 35 to 63: score 15.2, E = 0.0042
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      +l+e+ +  D+ g G+++++E+ +++ kl   
    KIAA0980    35    QLREVYSSCDTTGTGFLDRQELTQLCLKL    63   

PF00036.22.fs: domain 4 of 4, from 261 to 289: score 31.4, E = 1.6e-07
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      el+++F+++D+DgDGk+s+eEf+ +l +    
    KIAA0980   261    ELEDLFNKLDQDGDGKVSLEEFQLGLFSH    289  

PF00036.22.ls: domain 3 of 3, from 261 to 289: score 33.4, E = 7.2e-07
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      el+++F+++D+DgDGk+s+eEf+ +l +    
    KIAA0980   261    ELEDLFNKLDQDGDGKVSLEEFQLGLFSH    289  

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