hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18295414/chunk_1/iprscan-20080502-18295414.nocrc
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Query sequence: KIAA0977
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02205.10.ls WH2 motif                                       16.7      0.076   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02205.10.ls   1/1    1160  1180 ..     1    21 []    16.7    0.076

Alignments of top-scoring domains:
PF02205.10.ls: domain 1 of 1, from 1160 to 1180: score 16.7, E = 0.076
                   *->aRsaLLaaIrsagqGikLKKv<-*
                      +R+ LL aIrs+   +kLK v   
    KIAA0977  1160    MRQSLLTAIRSGEAAAKLKRV    1180 

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