hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18125428/chunk_1/iprscan-20080502-18125428.nocrc
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Query sequence: KIAA0967
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00295                                                 110.3    2.2e-28   1
SM00228                                                  54.1    1.8e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00228    1/1      67   135 ..     1    80 []    54.1  1.8e-11
SM00295    1/1     177   401 ..     1   232 []   110.3  2.2e-28

Alignments of top-scoring domains:
SM00228: domain 1 of 1, from 67 to 135: score 54.1, E = 1.8e-11
                   *->gglGfsivg..gifvssvvpGspAakaGrkslglLkvGDvIleVNGe
                      + +Gf i+++ ++ v+ v +G+ A+         L +GD+Il+ N+ 
    KIAA0967    67    QDYGFHISEslPLTVVAVTAGGSAHGK-------LFPGDQILQMNN- 105  

                   tsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   ++ e+l+ e+avd+l++a +     ++++tv+R     
    KIAA0967   106 EPAEDLSWERAVDILREAED-----SLSITVVRCT    135  

SM00295: domain 1 of 1, from 177 to 401: score 110.3, E = 2.2e-28
                   *->spkprvlkVylldgttlefevdssttaeelletvcrklglspresey
                       ++p+vlk yl +g+t+ f+++ +tt+++++ tv +kl++  r+ ey
    KIAA0967   177    LCMPNVLKLYLENGQTKAFKFEANTTVKDIILTVKEKLSI--RSIEY 221  

                   FgLqfedkded..shWldpaktilkqdvkspksepltlyFRvkFyppdwh
                   F+L++e   + ++ h l ++ ++  q+v++++s+ ++++FRv F p+d+ 
    KIAA0967   222 FALALEEQYSIsrLHLL-HEEELIQQVVEREESHDYRCLFRVCFVPKDP- 269  

                   gppeqlkeDptrynllylQvrddilsGrlpcp.seeeallLAaLalqaef
                       +lkeDp+++++lylQ ++d+l++r+ ++ +   al+LAaL++q   
    KIAA0967   270 --LDLLKEDPVAFEYLYLQSCSDVLQERFAVEmKCSSALRLAALHIQERI 317  

                   GdydpeeeekkkslkhvakelslkrflPkqlldsikasflqiqltlkewr
                     + ++++   +slk+++k+++ + f+ + ll+         +++ k+++
    KIAA0967   318 YACAQPQK---ISLKYIEKDWGIENFISPTLLR---------NMKGKDIK 355  

                   erIvelhkeh.........aglspeeaklkYLelarrLpptYGvelF<-*
                   + I+   k+ ++  +++++   s +++ l+YL+++  L  tYG + F   
    KIAA0967   356 KAISFHMKRNqnlleprqkQLISAAQLRLNYLQILGELK-TYGGRIF    401  

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