hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18125428/chunk_1/iprscan-20080502-18125428.nocrc
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Query sequence: KIAA0967
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00595.14.fs PDZ domain (Also known as DHR or GLGF)          37.1      9e-10   1
PF00595.14.ls PDZ domain (Also known as DHR or GLGF)          39.0    1.5e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00595.14.fs   1/1      57   132 ..     1    86 []    37.1    9e-10
PF00595.14.ls   1/1      57   132 ..     1    86 []    39.0  1.5e-08

Alignments of top-scoring domains:
PF00595.14.fs: domain 1 of 1, from 57 to 132: score 37.1, E = 9e-10
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      +v++ k+   +  Gf i++        ++ v  v +G g+A+ +  L
    KIAA0967    57    TVKIDKDTLLQDYGFHISE------SLPLTVVAVTAG-GSAHGK--L 94   

                   qaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                    +GDqIl++N+++ e+ls e+av++l+++ + ++++tv    
    KIAA0967    95 FPGDQILQMNNEPAEDLSWERAVDILREAED-SLSITVV    132  

PF00595.14.ls: domain 1 of 1, from 57 to 132: score 39.0, E = 1.5e-08
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      +v++ k+   +  Gf i++        ++ v  v +G g+A+ +  L
    KIAA0967    57    TVKIDKDTLLQDYGFHISE------SLPLTVVAVTAG-GSAHGK--L 94   

                   qaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                    +GDqIl++N+++ e+ls e+av++l+++ + ++++tv    
    KIAA0967    95 FPGDQILQMNNEPAEDLSWERAVDILREAED-SLSITVV    132  

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