hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18093269/chunk_1/iprscan-20080502-18093269.nocrc
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Query sequence: KIAA0965
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.ls Protein kinase domain                       285.5    9.3e-83   1
PF00069.15.fs Protein kinase domain                       283.6    3.5e-82   1
PF00433.14.fs Protein kinase C terminal domain             45.9    4.5e-13   1
PF07714.7.fs Protein tyrosine kinase                      41.1    7.8e-12   3
PF00433.14.ls Protein kinase C terminal domain             47.9    3.2e-11   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.ls   1/1     115   408 ..     1   287 []   285.5  9.3e-83
PF00069.15.fs   1/1     115   408 ..     1   287 []   283.6  3.5e-82
PF07714.7.fs   2/3     183   260 ..    76   160 ..    20.7  6.5e-06
PF07714.7.fs   3/3     316   362 ..   184   233 ..    11.6   0.0027
PF00433.14.ls   1/1     426   472 ..     1    47 []    47.9  3.2e-11
PF00433.14.fs   1/1     426   472 ..     1    47 []    45.9  4.5e-13

Alignments of top-scoring domains:
PF00069.15.ls: domain 1 of 1, from 115 to 408: score 285.5, E = 9.3e-83
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      +e l+++G+G+fG+V++ ++k+tg+i+A+Ki++k++  +k++ +++r
    KIAA0965   115    FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKSDMLEKEQVAHIR 161  

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
                   + E  il + +   +v+++++f+dk++lyl++E+++gG    d +++l+ 
    KIAA0965   162 A-ERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGG----DMMTLLM- 205  

                   trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv
                     +k +l  +e+e ++++ +++ +++ +H+ g+iHRD+KP+N+Lld +g+
    KIAA0965   206 --KKDTL--TEEETQFYISETVLAIDAIHQLGFIHRDIKPDNLLLDAKGH 251  

                   vdaflKiaDFGlAkkls.................................
                   v    K++DFGl+  l++ ++++  ++ +++++++ + ++ +++++ ++ 
    KIAA0965   252 V----KLSDFGLCTGLKkahrtefyrnlthnppsdfsfqnmnskrkaetw 297  

                   .t.sss.lttfvGTpwYmAPEvllggngygtkvDvWSlGvilyelltGkp
                   + ++ + +++ vGTp+Y+APEv + ++gy + +D+WSlGvi+ye+l G+p
    KIAA0965   298 kKnRRQlAYSTVGTPDYIAPEVFM-QTGYNKLCDWWSLGVIMYEMLIGYP 346  

                   PFsgevqdsldqlqlirkilgpplefdspewdsisrsefrrlpnlseeak
                   PF++e     ++++ +rk++  +    +p + +is           e ak
    KIAA0965   347 PFCSE-----TPQETYRKVMNWKETLVFPPEVPIS-----------EKAK 380  

                   dLikkcLnkDPskRlt...aeeilqHPwf<-*
                   dLi + ++ D + R+++++ eei+ HP+f   
    KIAA0965   381 DLILR-FCIDSENRIGnsgVEEIKGHPFF    408  

PF00069.15.fs: domain 1 of 1, from 115 to 408: score 283.6, E = 3.5e-82
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      +e l+++G+G+fG+V++ ++k+tg+i+A+Ki++k++  +k++ +++r
    KIAA0965   115    FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKSDMLEKEQVAHIR 161  

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
                   + E  il + +   +v+++++f+dk++lyl++E+++gG    d +++l+ 
    KIAA0965   162 A-ERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGG----DMMTLLM- 205  

                   trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv
                     +k +l  +e+e ++++ +++ +++ +H+ g+iHRD+KP+N+Lld +g+
    KIAA0965   206 --KKDTL--TEEETQFYISETVLAIDAIHQLGFIHRDIKPDNLLLDAKGH 251  

                   vdaflKiaDFGlAkkls.................................
                   v    K++DFGl+  l++ ++++  ++ +++++++ + ++ +++++ ++ 
    KIAA0965   252 V----KLSDFGLCTGLKkahrtefyrnlthnppsdfsfqnmnskrkaetw 297  

                   .t.sss.lttfvGTpwYmAPEvllggngygtkvDvWSlGvilyelltGkp
                   + ++ + +++ vGTp+Y+APEv + ++gy + +D+WSlGvi+ye+l G+p
    KIAA0965   298 kKnRRQlAYSTVGTPDYIAPEVFM-QTGYNKLCDWWSLGVIMYEMLIGYP 346  

                   PFsgevqdsldqlqlirkilgpplefdspewdsisrsefrrlpnlseeak
                   PF++e     ++++ +rk++  +    +p + +is           e ak
    KIAA0965   347 PFCSE-----TPQETYRKVMNWKETLVFPPEVPIS-----------EKAK 380  

                   dLikkcLnkDPskRlt...aeeilqHPwf<-*
                   dLi + ++ D + R+++++ eei+ HP+f   
    KIAA0965   381 DLILR-FCIDSENRIGnsgVEEIKGHPFF    408  

PF07714.7.fs: domain 2 of 3, from 183 to 260: score 20.7, E = 6.5e-06
                   *->kegePggpglyiVtEymegGdLldfLrkhregrpLtlkdLlsfalQi
                      ++++     ly+++E+ +gGd+ + L k   ++ Lt ++   +  + 
    KIAA0965   183    QDKRN----LYLIMEFLPGGDMMTLLMK---KDTLTEEETQFYISET 222  

                   AkGMeYLesknfvHRDLAARNcLVsenlvVKIsDFGLa<-*
                     + +  ++ +f+HRD+   N L++ +++VK sDFGL+   
    KIAA0965   223 VLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLC    260  

PF07714.7.fs: domain 3 of 3, from 316 to 362: score 11.6, E = 0.0027
                   *->APEslkygkFtskSDVWSFGVlLWEiftlGeqPFYpgmsneevlell
                      APE+++   ++   D WS GV ++E++  G +P +   +++e++ ++
    KIAA0965   316    APEVFMQTGYNKLCDWWSLGVIMYEMLI-GYPP-FCSETPQETYRKV 360  

                   yed<-*
                    ++   
    KIAA0965   361 -MN    362  

PF00433.14.ls: domain 1 of 1, from 426 to 472: score 47.9, E = 3.2e-11
                   *->kvksptDTsNFDpeFTsepptltpppdsr.lssgkqleFrGFtYvnp
                      ++ks++DTsNFD +F + ++   +p++++++ ++k++ F ++tY+++
    KIAA0965   426    EIKSIDDTSNFD-DFPESDILQPVPNTTEpDYKSKDWVFLNYTYKRF 471  

                   e<-*
                   e   
    KIAA0965   472 E    472  

PF00433.14.fs: domain 1 of 1, from 426 to 472: score 45.9, E = 4.5e-13
                   *->kvksptDTsNFDpeFTsepptltpppdsr.lssgkqleFrGFtYvnp
                      ++ks++DTsNFD +F + ++   +p++++++ ++k++ F ++tY+++
    KIAA0965   426    EIKSIDDTSNFD-DFPESDILQPVPNTTEpDYKSKDWVFLNYTYKRF 471  

                   e<-*
                   e   
    KIAA0965   472 E    472  

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