# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh04894.fasta.nr -Q ../query/KIAA0940.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0940, 699 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7803671 sequences Expectation_n fit: rho(ln(x))= 7.1867+/-0.000216; mu= 4.7945+/- 0.012 mean_var=190.9316+/-36.573, 0's: 31 Z-trim: 92 B-trim: 96 in 1/65 Lambda= 0.092819 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|55957939|emb|CAI13637.1| cytoplasmic polyadenyl ( 684) 4791 654.3 4e-185 gi|114631783|ref|XP_001145214.1| PREDICTED: cytopl ( 685) 4779 652.7 1.2e-184 gi|109089927|ref|XP_001088983.1| PREDICTED: simila ( 687) 4734 646.7 7.9e-183 gi|73998014|ref|XP_543930.2| PREDICTED: similar to ( 684) 4685 640.1 7.4e-181 gi|74149622|dbj|BAE36436.1| unnamed protein produc ( 561) 3632 499.0 1.8e-138 gi|118763624|gb|AAI28378.1| Cpeb3 protein [Mus mus ( 477) 3234 445.7 1.8e-122 gi|119368634|sp|Q28CH2.1|CPEB3_XENTR RecName: Full ( 632) 3084 425.7 2.4e-116 gi|126331892|ref|XP_001363549.1| PREDICTED: simila ( 569) 2584 358.7 3.2e-96 gi|119368633|sp|Q8NE35.2|CPEB3_HUMAN RecName: Full ( 698) 2556 355.1 5e-95 gi|77748372|gb|AAI05926.1| CPEB2 protein [Homo sap ( 562) 2546 353.6 1.1e-94 gi|22209060|gb|AAH36444.1| Cytoplasmic polyadenyla ( 697) 2546 353.7 1.3e-94 gi|32396054|gb|AAP41553.1| cytoplasmic polyadenyla ( 559) 2544 353.3 1.3e-94 gi|189536473|ref|XP_695647.3| PREDICTED: similar t ( 720) 2465 342.9 2.4e-91 gi|73951453|ref|XP_850927.1| PREDICTED: similar to ( 424) 2461 342.1 2.4e-91 gi|119613136|gb|EAW92730.1| cytoplasmic polyadenyl ( 422) 2441 339.4 1.5e-90 gi|73953374|ref|XP_866333.1| PREDICTED: similar to ( 749) 2437 339.2 3.3e-90 gi|109073892|ref|XP_001118935.1| PREDICTED: simila ( 406) 2415 335.9 1.7e-89 gi|75517591|gb|AAI03942.1| CPEB2 protein [Homo sap ( 568) 2340 326.0 2.2e-86 gi|149052215|gb|EDM04032.1| cytoplasmic polyadenyl ( 721) 2326 324.3 9.6e-86 gi|73953366|ref|XP_536428.2| PREDICTED: similar to ( 721) 2325 324.1 1e-85 gi|114603431|ref|XP_001155372.1| PREDICTED: cytopl ( 721) 2325 324.1 1e-85 gi|148705639|gb|EDL37586.1| cytoplasmic polyadenyl ( 517) 2321 323.4 1.2e-85 gi|109079788|ref|XP_001098034.1| PREDICTED: simila ( 721) 2319 323.3 1.8e-85 gi|81912024|sp|Q7TN98.1|CPEB4_MOUSE RecName: Full= ( 729) 2318 323.2 2e-85 gi|81912025|sp|Q7TN99.1|CPEB3_MOUSE RecName: Full= ( 716) 2315 322.8 2.6e-85 gi|149611493|ref|XP_001512377.1| PREDICTED: simila ( 731) 2315 322.8 2.7e-85 gi|74181032|dbj|BAE27791.1| unnamed protein produc ( 716) 2314 322.7 2.9e-85 gi|118097347|ref|XP_414678.2| PREDICTED: similar t ( 618) 2311 322.2 3.5e-85 gi|148691829|gb|EDL23776.1| cytoplasmic polyadenyl ( 721) 2312 322.4 3.5e-85 gi|73953382|ref|XP_852818.1| PREDICTED: similar to ( 729) 2312 322.4 3.5e-85 gi|119368635|sp|Q17RY0.1|CPEB4_HUMAN RecName: Full ( 729) 2309 322.0 4.7e-85 gi|148691828|gb|EDL23775.1| cytoplasmic polyadenyl ( 729) 2309 322.0 4.7e-85 gi|109463839|ref|XP_001080170.1| PREDICTED: simila ( 742) 2309 322.0 4.7e-85 gi|31874681|emb|CAD98072.1| hypothetical protein [ ( 729) 2308 321.9 5.1e-85 gi|109460088|ref|XP_220043.4| PREDICTED: similar t ( 742) 2307 321.7 5.7e-85 gi|126331890|ref|XP_001363479.1| PREDICTED: simila ( 599) 2303 321.1 7.1e-85 gi|109079786|ref|XP_001098122.1| PREDICTED: simila ( 729) 2303 321.2 8.1e-85 gi|126290868|ref|XP_001370640.1| PREDICTED: simila ( 731) 2295 320.1 1.7e-84 gi|158937340|sp|Q7Z5Q1.3|CPEB2_HUMAN RecName: Full ( 589) 2291 319.5 2.1e-84 gi|73953372|ref|XP_866322.1| PREDICTED: similar to ( 754) 2289 319.3 3.1e-84 gi|118090698|ref|XP_420779.2| PREDICTED: hypotheti ( 587) 2286 318.8 3.4e-84 gi|148705638|gb|EDL37585.1| cytoplasmic polyadenyl ( 539) 2272 316.9 1.2e-83 gi|149410658|ref|XP_001505802.1| PREDICTED: simila ( 454) 2267 316.2 1.7e-83 gi|55728717|emb|CAH91098.1| hypothetical protein [ ( 482) 2264 315.8 2.3e-83 gi|119570483|gb|EAW50098.1| cytoplasmic polyadenyl ( 390) 2262 315.4 2.4e-83 gi|194205854|ref|XP_001917452.1| PREDICTED: cytopl ( 696) 2252 314.3 9e-83 gi|81913037|sp|Q812E0.1|CPEB2_MOUSE RecName: Full= ( 521) 2247 313.5 1.2e-82 gi|56206768|emb|CAI24339.1| cytoplasmic polyadenyl ( 392) 2231 311.3 4.3e-82 gi|114631785|ref|XP_001145135.1| PREDICTED: cytopl ( 699) 2231 311.5 6.3e-82 gi|194678934|ref|XP_880185.2| PREDICTED: similar t ( 698) 2223 310.5 1.3e-81 >>gi|55957939|emb|CAI13637.1| cytoplasmic polyadenylatio (684 aa) initn: 4791 init1: 4791 opt: 4791 Z-score: 3479.8 bits: 654.3 E(): 4e-185 Smith-Waterman score: 4791; 100.000% identity (100.000% similar) in 684 aa overlap (16-699:1-684) 10 20 30 40 50 60 KIAA09 ILSILKNWTLKAAQTMQDDLLMDKSKTQPQPQQQQRQQQQPQPESSVSEAPSTPLSSETP ::::::::::::::::::::::::::::::::::::::::::::: gi|559 MQDDLLMDKSKTQPQPQQQQRQQQQPQPESSVSEAPSTPLSSETP 10 20 30 40 70 80 90 100 110 120 KIAA09 KPEENSAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGASLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 KPEENSAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGASLSP 50 60 70 80 90 100 130 140 150 160 170 180 KIAA09 SFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQ 110 120 130 140 150 160 190 200 210 220 230 240 KIAA09 PPPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 PPPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSSSA 170 180 190 200 210 220 250 260 270 280 290 300 KIAA09 VAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 VAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSP 230 240 250 260 270 280 310 320 330 340 350 360 KIAA09 LNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 LNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFN 290 300 310 320 330 340 370 380 390 400 410 420 KIAA09 LHSLENSLMDMIRTDHEPLKGRMGINFHHPGTDNIMALNSRSSLFPFEDAFLDDSHGDQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 LHSLENSLMDMIRTDHEPLKGRMGINFHHPGTDNIMALNSRSSLFPFEDAFLDDSHGDQA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA09 LSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 LSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKS 410 420 430 440 450 460 490 500 510 520 530 540 KIAA09 YFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 YFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVM 470 480 490 500 510 520 550 560 570 580 590 600 KIAA09 DGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 DGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFS 530 540 550 560 570 580 610 620 630 640 650 660 KIAA09 NQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 NQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCL 590 600 610 620 630 640 670 680 690 KIAA09 QYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS ::::::::::::::::::::::::::::::::::::::: gi|559 QYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS 650 660 670 680 >>gi|114631783|ref|XP_001145214.1| PREDICTED: cytoplasmi (685 aa) initn: 4204 init1: 4204 opt: 4779 Z-score: 3471.2 bits: 652.7 E(): 1.2e-184 Smith-Waterman score: 4779; 99.854% identity (99.854% similar) in 685 aa overlap (16-699:1-685) 10 20 30 40 50 60 KIAA09 ILSILKNWTLKAAQTMQDDLLMDKSKTQPQPQQQQRQQQQPQPESSVSEAPSTPLSSETP ::::::::::::::::::::::::::::::::::::::::::::: gi|114 MQDDLLMDKSKTQPQPQQQQRQQQQPQPESSVSEAPSTPLSSETP 10 20 30 40 70 80 90 100 110 KIAA09 KPEENSAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPP-QEPAAPGASLS :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: gi|114 KPEENSAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPPQEPAAPGASLS 50 60 70 80 90 100 120 130 140 150 160 170 KIAA09 PSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQ 110 120 130 140 150 160 180 190 200 210 220 230 KIAA09 QPPPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QPPPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSSS 170 180 190 200 210 220 240 250 260 270 280 290 KIAA09 AVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPS 230 240 250 260 270 280 300 310 320 330 340 350 KIAA09 PLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTF 290 300 310 320 330 340 360 370 380 390 400 410 KIAA09 NLHSLENSLMDMIRTDHEPLKGRMGINFHHPGTDNIMALNSRSSLFPFEDAFLDDSHGDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 NLHSLENSLMDMIRTDHEPLKGRMGINFHHPGTDNIMALNSRSSLFPFEDAFLDDSHGDQ 350 360 370 380 390 400 420 430 440 450 460 470 KIAA09 ALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESK 410 420 430 440 450 460 480 490 500 510 520 530 KIAA09 SYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFV 470 480 490 500 510 520 540 550 560 570 580 590 KIAA09 MDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAF 530 540 550 560 570 580 600 610 620 630 640 650 KIAA09 SNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTC 590 600 610 620 630 640 660 670 680 690 KIAA09 LQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS :::::::::::::::::::::::::::::::::::::::: gi|114 LQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS 650 660 670 680 >>gi|109089927|ref|XP_001088983.1| PREDICTED: similar to (687 aa) initn: 4633 init1: 4633 opt: 4734 Z-score: 3438.6 bits: 646.7 E(): 7.9e-183 Smith-Waterman score: 4734; 98.836% identity (99.127% similar) in 687 aa overlap (16-699:1-687) 10 20 30 40 50 KIAA09 ILSILKNWTLKAAQTMQDDLLMDKSKTQPQPQQQQRQQQQ---PQPESSVSEAPSTPLSS ::::::::::::::::::::::::: :::::::::.:::: :: gi|109 MQDDLLMDKSKTQPQPQQQQRQQQQQQQPQPESSVSETPSTPHSS 10 20 30 40 60 70 80 90 100 110 KIAA09 ETPKPEENSAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGAS ::::::::::: :::::::::::.: :::::::::::::::::::::::::::::::::: gi|109 ETPKPEENSAVQALSPAAAPPAPSGSDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGAS 50 60 70 80 90 100 120 130 140 150 160 170 KIAA09 LSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQH 110 120 130 140 150 160 180 190 200 210 220 230 KIAA09 HQQPPPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HQQPPPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSS 170 180 190 200 210 220 240 250 260 270 280 290 KIAA09 SSAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SSAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGV 230 240 250 260 270 280 300 310 320 330 340 350 KIAA09 PSPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYD 290 300 310 320 330 340 360 370 380 390 400 410 KIAA09 TFNLHSLENSLMDMIRTDHEPLKGRMGINFHHPGTDNIMALNSRSSLFPFEDAFLDDSHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TFNLHSLENSLMDMIRTDHEPLKGRMGINFHHPGTDNIMALNSRSSLFPFEDAFLDDSHG 350 360 370 380 390 400 420 430 440 450 460 470 KIAA09 DQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAE 410 420 430 440 450 460 480 490 500 510 520 530 KIAA09 SKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSD 470 480 490 500 510 520 540 550 560 570 580 590 KIAA09 FVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRV 530 540 550 560 570 580 600 610 620 630 640 650 KIAA09 AFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANV 590 600 610 620 630 640 660 670 680 690 KIAA09 TCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS :::::::::::::::::::::::::::::::::::::::::: gi|109 TCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS 650 660 670 680 >>gi|73998014|ref|XP_543930.2| PREDICTED: similar to cyt (684 aa) initn: 3656 init1: 3656 opt: 4685 Z-score: 3403.1 bits: 640.1 E(): 7.4e-181 Smith-Waterman score: 4685; 97.668% identity (99.125% similar) in 686 aa overlap (16-699:1-684) 10 20 30 40 50 KIAA09 ILSILKNWTLKAAQTMQDDLLMDKSKTQPQPQQQ--QRQQQQPQPESSVSEAPSTPLSSE ::::::::::::::::::: :.:::::::: :..:::::::::: gi|739 MQDDLLMDKSKTQPQPQQQRQQQQQQQPQPEPSAAEAPSTPLSSE 10 20 30 40 60 70 80 90 100 110 KIAA09 TPKPEENSAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGASL :::::..::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|739 TPKPEDSSAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPTAPGASL 50 60 70 80 90 100 120 130 140 150 160 170 KIAA09 SPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHH 110 120 130 140 150 160 180 190 200 210 220 230 KIAA09 QQPPPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSS :::::::: ::::::::::.::::::::::::::::::::::::::::::::::::::: gi|739 QQPPPPAP--QPAQPAQPPQGQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSS 170 180 190 200 210 220 240 250 260 270 280 290 KIAA09 SAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVP ::..::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|739 SAAVAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLPAGRDPRRAVGVGVGVGVGVP 230 240 250 260 270 280 300 310 320 330 340 350 KIAA09 SPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDT 290 300 310 320 330 340 360 370 380 390 400 410 KIAA09 FNLHSLENSLMDMIRTDHEPLKGRMGINFHHPGTDNIMALNSRSSLFPFEDAFLDDSHGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FNLHSLENSLMDMIRTDHEPLKGRMGINFHHPGTDNIMALNSRSSLFPFEDAFLDDSHGD 350 360 370 380 390 400 420 430 440 450 460 470 KIAA09 QALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAES :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QSLSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAES 410 420 430 440 450 460 480 490 500 510 520 530 KIAA09 KSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDF 470 480 490 500 510 520 540 550 560 570 580 590 KIAA09 VMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVA 530 540 550 560 570 580 600 610 620 630 640 650 KIAA09 FSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVT 590 600 610 620 630 640 660 670 680 690 KIAA09 CLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS ::::::::::::::::::::::::::::::::::::::::: gi|739 CLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS 650 660 670 680 >>gi|74149622|dbj|BAE36436.1| unnamed protein product [M (561 aa) initn: 2414 init1: 1227 opt: 3632 Z-score: 2642.1 bits: 499.0 E(): 1.8e-138 Smith-Waterman score: 3632; 94.662% identity (96.085% similar) in 562 aa overlap (16-565:1-559) 10 20 30 40 50 KIAA09 ILSILKNWTLKAAQTMQDDLLMDKSKTQPQPQQQQRQQQQPQ----PESSVSEAPSTPLS ::::::::::::::: ::::::::: : :: ...:::::::: gi|741 MQDDLLMDKSKTQPQSQQQQRQQQQQQQQLQPEPGAAEAPSTPLS 10 20 30 40 60 70 80 90 100 110 KIAA09 SETPKPEENSAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGA :: ::::..:::::::::.::::::::::::::::::::::::::::::::::::.:::: gi|741 SEIPKPEDSSAVPALSPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPTAPGA 50 60 70 80 90 100 120 130 140 150 160 170 KIAA09 SLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQ 110 120 130 140 150 160 180 190 200 210 220 230 KIAA09 HHQQPPPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPS :::::::::: :: :::::::::: ::::::::::::::::::::: :::::::::::: gi|741 HHQQPPPPAP--QPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAA-YGHQPIMTSKPS 170 180 190 200 210 220 240 250 260 270 280 290 KIAA09 SSSAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SSSAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVG 230 240 250 260 270 280 300 310 320 330 340 350 KIAA09 VPSPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VPSPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPY 290 300 310 320 330 340 360 370 380 390 400 KIAA09 DTFNLHSLENSLMDMIRTDHEPLKGRMGINFHHPGTDNIMALNSRS--------SLFPFE :::::::::::::::::::::::::::::::::::::::::::.:: :::::: gi|741 DTFNLHSLENSLMDMIRTDHEPLKGRMGINFHHPGTDNIMALNTRSYGRRRGRSSLFPFE 350 360 370 380 390 400 410 420 430 440 450 460 KIAA09 DAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPL 410 420 430 440 450 460 470 480 490 500 510 520 KIAA09 VVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQI 470 480 490 500 510 520 530 540 550 560 570 580 KIAA09 RPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPEL ::::::::::::::::::::::::::::::::::: : gi|741 RPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAGEWK 530 540 550 560 590 600 610 620 630 640 KIAA09 KYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGK >>gi|118763624|gb|AAI28378.1| Cpeb3 protein [Mus musculu (477 aa) initn: 2298 init1: 2109 opt: 3234 Z-score: 2354.9 bits: 445.7 E(): 1.8e-122 Smith-Waterman score: 3234; 98.113% identity (98.323% similar) in 477 aa overlap (231-699:1-477) 210 220 230 240 250 260 KIAA09 PPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSSSAVAAAAAAAAASSASSSWNTH :::::::::::::::::::::::::::::: gi|118 MTSKPSSSSAVAAAAAAAAASSASSSWNTH 10 20 30 270 280 290 300 310 320 KIAA09 QSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLKKPFSSNVIAPPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 QSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLKKPFSSNVIAPPK 40 50 60 70 80 90 330 340 350 360 370 380 KIAA09 FPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLENSLMDMIRTDHEPLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 FPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLENSLMDMIRTDHEPLK 100 110 120 130 140 150 390 400 410 420 430 KIAA09 GRMGINFHHPGTDNIMALNSRS--------SLFPFEDAFLDDSHGDQALSSGLSSPTRCQ :::::::::::::::::::.:: :::::::::::::::::::::::::::::: gi|118 GRMGINFHHPGTDNIMALNTRSYGRRRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQ 160 170 180 190 200 210 440 450 460 470 480 490 KIAA09 NGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 NGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLF 220 230 240 250 260 270 500 510 520 530 540 550 KIAA09 QEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 QEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTI 280 290 300 310 320 330 560 570 580 590 600 610 KIAA09 FVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 FVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISAR 340 350 360 370 380 390 620 630 640 650 660 670 KIAA09 FVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 FVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIH 400 410 420 430 440 450 680 690 KIAA09 SRAGREFHKPLVKEGGDRPRHVPFRWS ::::::::::::::::::::::::::: gi|118 SRAGREFHKPLVKEGGDRPRHVPFRWS 460 470 >>gi|119368634|sp|Q28CH2.1|CPEB3_XENTR RecName: Full=Cyt (632 aa) initn: 2580 init1: 2071 opt: 3084 Z-score: 2244.9 bits: 425.7 E(): 2.4e-116 Smith-Waterman score: 3535; 77.618% identity (84.792% similar) in 697 aa overlap (16-699:1-632) 10 20 30 40 50 60 KIAA09 ILSILKNWTLKAAQTMQDDLLMDKSKTQPQPQQQQRQQQQPQPESSVSEAPSTPLSSETP :::::::::::.: :::: : :: :: .. . gi|119 MQDDLLMDKSKAQ------QRQQPQ-QPPSSQTQ--------QQQ 10 20 30 70 80 90 100 110 120 KIAA09 KPEENSAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGASLSP : . : : : ..::. . :::::::::::::::.: : :..: :::: gi|119 KEAASVAEPPSSRESSPPTHK--DKMQMESPLLPGLSFQQEP--------PTTP--SLSP 40 50 60 70 130 140 150 160 170 KIAA09 SFGSTWSTGTTN-AVEDSFFQGITPVNGTMLFQNFPHH--VNPVFGGTFSPQIGLA-QTQ ::::::::: .: ::.:::: ::::::::::::::::: ::::::::::::.::: ::: gi|119 SFGSTWSTGGSNSAVDDSFFPGITPVNGTMLFQNFPHHHHVNPVFGGTFSPQMGLAHQTQ 80 90 100 110 120 130 180 190 200 210 220 230 KIAA09 HHQQPPPPAPAPQPAQPAQPPQAQPPQQRRSPASPS-QAPYAQRSAAAAYGHQPIMTSKP . :::::::::. .. :.::. ::.::::.:.:: gi|119 Q-------------------------QQRRSPASPNNHTAYTQRN---AYSHQPILTNKP 140 150 160 170 240 250 260 270 280 290 KIAA09 SSSSAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGV ::: ..: . :.::..: ::::..::::::..: :::::::::::::::: gi|119 SSSPN--------SSSPSPSNWNNQQ--NAAWNTPSNPWGAMQPGRDPRRAVGVGVGVGV 180 190 200 210 220 300 310 320 330 340 350 KIAA09 GVPSPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRP :::::::::::::: ::::::::::: ::.::: :::.:::::::::::.:::.:::.:: gi|119 GVPSPLNPISPLKKTFSSNVIAPPKFSRASPLTPKSWVEDNAFRTDNGNTLLPLQDRNRP 230 240 250 260 270 280 360 370 380 390 400 KIAA09 YDTFNLHSLENSLMDMIRTDHEPLKGRMGINFHHPGTDNIMALNSRS--------SLFPF ::.::::.:::::::::::::::::.:::.::::::::::::::.:: ::::: gi|119 YDSFNLHTLENSLMDMIRTDHEPLKARMGLNFHHPGTDNIMALNTRSYGRRRGRSSLFPF 290 300 310 320 330 340 410 420 430 440 450 460 KIAA09 EDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGP ::.:: :.::::.:::::::::.::::::.:::::::::::::::::::::::::::::: gi|119 EDGFLGDGHGDQSLSSGLSSPTHCQNGERIERYSRKVFVGGLPPDIDEDEITASFRRFGP 350 360 370 380 390 400 470 480 490 500 510 520 KIAA09 LVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQ 410 420 430 440 450 460 530 540 550 560 570 580 KIAA09 IRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPE 470 480 490 500 510 520 590 600 610 620 630 640 KIAA09 LKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGG 530 540 550 560 570 580 650 660 670 680 690 KIAA09 KFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS :::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|119 KFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFHWS 590 600 610 620 630 >>gi|126331892|ref|XP_001363549.1| PREDICTED: similar to (569 aa) initn: 2297 init1: 1845 opt: 2584 Z-score: 1883.6 bits: 358.7 E(): 3.2e-96 Smith-Waterman score: 2636; 66.887% identity (81.457% similar) in 604 aa overlap (119-699:5-569) 90 100 110 120 130 140 KIAA09 ESPLLPGLSFHQPPQQPPPPQEPAAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVN-- .: :.. : .. .. .:::...::. gi|126 MPPPNPETDSSFYPGMSS-INPAFFQSFSPVSPH 10 20 30 150 160 170 180 190 KIAA09 GTMLFQNFPHHVNPVFGGTFSPQIGLAQT------QHHQQPPPPAPAPQPAQPA-QPPQA . .. : . :: :. .. : . .. : :: :: :::: :: ::: gi|126 NPCAGMSVPGGGGGGGGGGFGSPFSAAAVPPPPPAMNLPQQPPSAPQPQPAPPAPQPP-- 40 50 60 70 80 90 200 210 220 230 240 250 KIAA09 QPPQQRRSPASPSQAPYAQRSAAAAY--------GHQPIMTSKPSSSSAVAAAAAAAAAS ::..::::.:: : : .::::. :::.. ..: gi|126 PPPSSRRSPVSP-QLQQHQAAAAAAFLQQRNSYNHHQPLLKQSP---------------- 100 110 120 130 260 270 280 290 300 310 KIAA09 SASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLKKPF :..::: ..::. : ::... ::: ::. : ..:.:. .: :::::::: gi|126 -----WSNHQS--SGWSTGSMSWGAMH-GRDHRRT-----G-NMGIPGTMNQISPLKKPF 140 150 160 170 180 320 330 340 350 360 KIAA09 SSNVIAPPKFPRAAP-LTSKSWMEDNAFRTDNGNN-LLPFQDRSRPYDTFNLHSLENSLM :.:::::::: :..: :: :::.:::.:::::..: :::.::::: ::..:.:::::::. gi|126 SGNVIAPPKFTRSTPSLTPKSWIEDNVFRTDNNSNTLLPLQDRSRMYDSLNMHSLENSLI 190 200 210 220 230 240 370 380 390 400 410 420 KIAA09 DMIRTDHEPLKGRMGINFHHPGTDNIMALNSRSSLFPFEDAFLDDSHGDQALSSGLSSPT :..:..:.:::::. .. ::::::.. ::.::::::..:..:::.:.::. . :.::: gi|126 DIMRAEHDPLKGRL--SYPHPGTDNLLMLNGRSSLFPIDDGLLDDGHSDQV--GVLNSPT 250 260 270 280 290 430 440 450 460 470 480 KIAA09 RC----QNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPK : :::::.::.::::::::::::::::::::::::::::::::::::::::::::: gi|126 -CYSAHQNGERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPK 300 310 320 330 340 350 490 500 510 520 530 540 KIAA09 GYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQP ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|126 GYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQP 360 370 380 390 400 410 550 560 570 580 590 600 KIAA09 LDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSY 420 430 440 450 460 470 610 620 630 640 650 660 KIAA09 IAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCE :::::::::::::.:::::::::::::::::::::::.:::::::::::::::::::::: gi|126 IAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCE 480 490 500 510 520 530 670 680 690 KIAA09 YCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS .:::.:::::::::::::::::.::::.. :::. gi|126 FCWANIHSRAGREFHKPLVKEGADRPRQIHFRWN 540 550 560 >>gi|119368633|sp|Q8NE35.2|CPEB3_HUMAN RecName: Full=Cyt (698 aa) initn: 4589 init1: 2551 opt: 2556 Z-score: 1862.3 bits: 355.1 E(): 5e-95 Smith-Waterman score: 4642; 95.332% identity (95.474% similar) in 707 aa overlap (16-699:1-698) 10 20 30 40 50 60 KIAA09 ILSILKNWTLKAAQTMQDDLLMDKSKTQPQPQQQQRQQQQPQPESSVSEAPSTPLSSETP ::::::::::::::::::::::::::::::::::::::::::::: gi|119 MQDDLLMDKSKTQPQPQQQQRQQQQPQPESSVSEAPSTPLSSETP 10 20 30 40 70 80 90 100 110 120 KIAA09 KPEENSAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGASLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KPEENSAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGASLSP 50 60 70 80 90 100 130 140 150 160 170 180 KIAA09 SFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQ 110 120 130 140 150 160 190 200 210 220 230 240 KIAA09 PPPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PPPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSSSA 170 180 190 200 210 220 250 260 270 280 290 300 KIAA09 VAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSP 230 240 250 260 270 280 310 320 330 340 350 360 KIAA09 LNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFN 290 300 310 320 330 340 370 380 390 KIAA09 LHSLENSLMDMIRTDHEPLKG-----------------------RMGINFHHPGTDNIMA ::::::::::::::::::::: :::::::::::::::: gi|119 LHSLENSLMDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMA 350 360 370 380 390 400 400 410 420 430 440 450 KIAA09 LNSRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDE :: .:::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LN---------NAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDE 410 420 430 440 450 460 470 480 490 500 510 KIAA09 ITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVS 460 470 480 490 500 510 520 530 540 550 560 570 KIAA09 SPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGV 520 530 540 550 560 570 580 590 600 610 620 630 KIAA09 CYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMC 580 590 600 610 620 630 640 650 660 670 680 690 KIAA09 DECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFR 640 650 660 670 680 690 KIAA09 WS :: gi|119 WS >>gi|77748372|gb|AAI05926.1| CPEB2 protein [Homo sapiens (562 aa) initn: 2356 init1: 1835 opt: 2546 Z-score: 1856.2 bits: 353.6 E(): 1.1e-94 Smith-Waterman score: 2590; 66.225% identity (80.298% similar) in 604 aa overlap (119-699:5-562) 90 100 110 120 130 140 KIAA09 ESPLLPGLSFHQPPQQPPPPQEPAAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGT ::. . . : .... .:: ...::. gi|777 MPPPSPDSENGFYPGLPSSMNPAFFPSFSPVS-- 10 20 30 150 160 170 180 190 200 KIAA09 MLFQNFPHHVN----PVFGGTFSPQIGLAQTQHHQQPPPPA---PAPQPAQPAQPPQAQP :: . :. :: . : .. ::::: : :: :: : : gi|777 ------PHGCTGLSVPTSGGGGGGFGGPFSATAVPPPPPPAMNIPQQQPPPPAAP---QQ 40 50 60 70 80 210 220 230 240 250 KIAA09 PQQRRSPASPSQAPYAQRSAAA------AYGH-QPIMTSKPSSSSAVAAAAAAAAASSAS ::.::::.::. : .::: .:.: ::.. ..: gi|777 PQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLLKQSP------------------- 90 100 110 120 260 270 280 290 300 310 KIAA09 SSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLKKPFSSN :..::: ..:.. : ::... ::: ::. : ..:.:. .: :::::::::.: gi|777 --WSNHQS--SGWGTGSMSWGAMH-GRDHRRT-----G-NMGIPGTMNQISPLKKPFSGN 130 140 150 160 170 320 330 340 350 360 KIAA09 VIAPPKFPRAAP-LTSKSWMEDNAFRTDNGNN-LLPFQ---DRSRPYDTFNLHSLENSLM ::::::: :..: :: :::.:::.:::::..: :::.: :::: ::..:.:::::::. gi|777 VIAPPKFTRSTPSLTPKSWIEDNVFRTDNNSNTLLPLQVRMDRSRMYDSLNMHSLENSLI 180 190 200 210 220 230 370 380 390 400 410 420 KIAA09 DMIRTDHEPLKGRMGINFHHPGTDNIMALNSRSSLFPFEDAFLDDSHGDQALSSGLSSPT :..:..:.:::::. .. ::::::.. ::.::::::..:..:::.:.::. . :.::: gi|777 DIMRAEHDPLKGRL--SYPHPGTDNLLMLNGRSSLFPIDDGLLDDGHSDQV--GVLNSPT 240 250 260 270 280 430 440 450 460 470 480 KIAA09 RC----QNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPK : :::::.::.::::::::::::::::::::::::::::::::::::::::::::: gi|777 -CYSAHQNGERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPK 290 300 310 320 330 340 490 500 510 520 530 540 KIAA09 GYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQP ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|777 GYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQP 350 360 370 380 390 400 550 560 570 580 590 600 KIAA09 LDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|777 LDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSY 410 420 430 440 450 460 610 620 630 640 650 660 KIAA09 IAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCE :::::::::::::.:::::::::::::::::::::::.:::::::::::::::::::::: gi|777 IAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCE 470 480 490 500 510 520 670 680 690 KIAA09 YCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS .:::.:::::::::::::::::.::::.. :::. gi|777 FCWANIHSRAGREFHKPLVKEGADRPRQIHFRWN 530 540 550 560 699 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Fri Mar 6 07:31:17 2009 done: Fri Mar 6 07:35:06 2009 Total Scan time: 1621.900 Total Display time: 0.340 Function used was FASTA [version 34.26.5 April 26, 2007]