hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17190694/chunk_1/iprscan-20080502-17190694.nocrc
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Query sequence: KIAA0937
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00678                                                 253.5    1.7e-71   2
SM00184                                                  37.2    2.2e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00678    1/2      39   120 ..     1    84 []   144.0  1.6e-38
SM00678    2/2     122   197 ..     1    84 []   109.5  3.8e-28
SM00184    1/1     443   501 ..     1    23 []    37.2  2.2e-06

Alignments of top-scoring domains:
SM00678: domain 1 of 2, from 39 to 120: score 144.0, E = 1.6e-38
                   *->gkkvvWeyesrshggWwpYdprvskhIEdafargkktcelsilGqvD
                       ++vvWe++++ hg+W+pY+p+vs+hIE+++++g ++ ++++lGqvD
    KIAA0937    39    SAVVVWEWLNE-HGRWRPYSPAVSHHIEAVVRAGPRAGGSVVLGQVD 84   

                   .sLrpYiiDfesmtQyrqdtgnrTtRkVrRvladpysa<-*
                   ++L+pYiiD++sm+Q+rqdtg  T R+VrR+++dp+sa   
    KIAA0937    85 sRLAPYIIDLQSMNQFRQDTG--TLRPVRRNYYDPSSA    120  

SM00678: domain 2 of 2, from 122 to 197: score 109.5, E = 3.8e-28
                   *->gkkvvWeyesrshggWwpYdprvskhIEdafargkktcelsilGqvD
                      gk+vvWe+e++ +g+W+pYd+ v ++I+ a+++++++++l+  G   
    KIAA0937   122    GKGVVWEWEND-NGSWTPYDMEVGITIQHAYEKQHPWIDLTSIG--- 164  

                   sLrpYiiDfesmtQyrqdtgnrTtRkVrRvladpysa<-*
                     + Y+iDf++m Q++++t ++  R+VrR+l+ +y++   
    KIAA0937   165 --FSYVIDFNTMGQINRQTQRQ--RRVRRRLDLIYPM    197  

SM00184: domain 1 of 1, from 443 to 501: score 37.2, E = 2.2e-06
                   *->CpICle....................pvvlpCgH.FCr.Ci......
                      C+IC+e+ + +++ ++++++ +++   +++ CgH ++  C+    ++
    KIAA0937   443    CTICMErltapsgykgpqptvkpdlvGKLSRCGHvYHIyCLvamynn 489  

                   ........CPlC<-*
                   ++++++ +CP+C   
    KIAA0937   490 gnkdgslqCPTC    501  

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