hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16565505/chunk_1/iprscan-20080502-16565505.nocrc
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Query sequence: KIAA0924
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 198.0    8.6e-55   9

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/9     256   279 ..     1    23 []    28.5  0.00094
SM00355      2/9     283   303 ..     1    23 []     5.7       72
SM00355      3/9     310   333 ..     1    23 []    20.7      0.2
SM00355      4/9     340   362 ..     1    23 []    23.7    0.026
SM00355      5/9     368   390 ..     1    23 []    25.4   0.0081
SM00355      6/9     396   418 ..     1    23 []    26.6   0.0035
SM00355      7/9     424   446 ..     1    23 []    27.2   0.0022
SM00355      8/9     452   474 ..     1    23 []    34.6  1.4e-05
SM00355      9/9     480   500 ..     1    23 []     5.7       71

Alignments of top-scoring domains:
SM00355: domain 1 of 9, from 256 to 279: score 28.5, E = 0.00094
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      ++C++ C+++f+++  L++Hm  +H   
    KIAA0924   256    LTCEK-CPRVFNTRwYLEKHMNvTH    279  

SM00355: domain 2 of 9, from 283 to 303: score 5.7, E = 72
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                        C++ Cgk+f  +++L  H++     
    KIAA0924   283    QICDK-CGKKFVLEsELSLHQQ--    303  

SM00355: domain 3 of 9, from 310 to 333: score 20.7, E = 0.2
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                       +C   C+ksf+   +L +H++ vH   
    KIAA0924   310    IQCVS-CNKSFKKLwSLHEHIKiVH    333  

SM00355: domain 4 of 9, from 340 to 362: score 23.7, E = 0.026
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + C+i C k+f +  + ++Hm  H   
    KIAA0924   340    FSCEI-CEKKFYTMaHVRKHMVAH    362  

SM00355: domain 5 of 9, from 368 to 390: score 25.4, E = 0.0081
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C+  Cgksf++  +Lk H  +H   
    KIAA0924   368    FTCET-CGKSFKRSmSLKVHSLQH    390  

SM00355: domain 6 of 9, from 396 to 418: score 26.6, E = 0.0035
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C+  C+++f  k +L+ Hm +H   
    KIAA0924   396    FRCEN-CDERFQYKyQLRSHMSIH    418  

SM00355: domain 7 of 9, from 424 to 446: score 27.2, E = 0.0022
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + C++ Cgk f+ k+ + +Hm++H   
    KIAA0924   424    FMCQW-CGKDFNMKqYFDEHMKTH    446  

SM00355: domain 8 of 9, from 452 to 474: score 34.6, E = 1.4e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + C+i Cgksf+s++++krH r+H   
    KIAA0924   452    FICEI-CGKSFTSRpNMKRHRRTH    474  

SM00355: domain 9 of 9, from 480 to 500: score 5.7, E = 71
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C++ Cg++f+  + Lk H       
    KIAA0924   480    YPCDV-CGQRFRFSnMLKAHKE--    500  

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