hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16565505/chunk_1/iprscan-20080502-16565505.nocrc
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Query sequence: KIAA0924
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00096.16.ls Zinc finger, C2H2 type                         239.6    6.4e-69   9
PF00096.16.fs Zinc finger, C2H2 type                         221.8    1.4e-63   9

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00096.16.fs   1/9     256   279 ..     1    24 []    25.2  5.1e-05
PF00096.16.ls   1/9     256   279 ..     1    24 []    27.1  5.7e-05
PF00096.16.ls   2/9     283   306 ..     1    24 []    21.4   0.0029
PF00096.16.ls   3/9     310   333 ..     1    24 []    22.6   0.0013
PF00096.16.ls   4/9     340   362 ..     1    24 []    25.2  0.00021
PF00096.16.fs   4/9     340   362 ..     1    24 []    23.2  0.00015
PF00096.16.ls   5/9     368   390 ..     1    24 []    29.0  1.5e-05
PF00096.16.fs   5/9     368   390 ..     1    24 []    27.0  1.7e-05
PF00096.16.fs   6/9     396   418 ..     1    24 []    25.5  4.1e-05
PF00096.16.ls   6/9     396   418 ..     1    24 []    27.5  4.4e-05
PF00096.16.ls   7/9     424   446 ..     1    24 []    25.8  0.00015
PF00096.16.fs   7/9     424   446 ..     1    24 []    23.8  0.00011
PF00096.16.ls   8/9     452   474 ..     1    24 []    36.5  8.5e-08
PF00096.16.fs   8/9     452   474 ..     1    24 []    34.5  2.3e-07
PF00096.16.ls   9/9     480   502 ..     1    24 []    24.4  0.00038

Alignments of top-scoring domains:
PF00096.16.fs: domain 1 of 9, from 256 to 279: score 25.2, E = 5.1e-05
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                       +C+ +C ++F+++  L++H++++H   
    KIAA0924   256    LTCE-KCPRVFNTRWYLEKHMNVtH    279  

PF00096.16.ls: domain 1 of 9, from 256 to 279: score 27.1, E = 5.7e-05
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                       +C+ +C ++F+++  L++H++++H   
    KIAA0924   256    LTCE-KCPRVFNTRWYLEKHMNVtH    279  

PF00096.16.ls: domain 2 of 9, from 283 to 306: score 21.4, E = 0.0029
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                        C+ +Cgk+F   s+L  H++t++   
    KIAA0924   283    QICD-KCGKKFVLESELSLHQQTdC    306  

PF00096.16.ls: domain 3 of 9, from 310 to 333: score 22.6, E = 0.0013
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                       +C   C+ksF+   +L+ H+++ H   
    KIAA0924   310    IQCV-SCNKSFKKLWSLHEHIKIvH    333  

PF00096.16.ls: domain 4 of 9, from 340 to 362: score 25.2, E = 0.00021
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C+ +C k+F + ++ ++H+  H   
    KIAA0924   340    FSCE-ICEKKFYTMAHVRKHMVAH    362  

PF00096.16.fs: domain 4 of 9, from 340 to 362: score 23.2, E = 0.00015
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C+ +C k+F + ++ ++H+  H   
    KIAA0924   340    FSCE-ICEKKFYTMAHVRKHMVAH    362  

PF00096.16.ls: domain 5 of 9, from 368 to 390: score 29.0, E = 1.5e-05
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C+  CgksF+r+ +Lk H   H   
    KIAA0924   368    FTCE-TCGKSFKRSMSLKVHSLQH    390  

PF00096.16.fs: domain 5 of 9, from 368 to 390: score 27.0, E = 1.7e-05
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C+  CgksF+r+ +Lk H   H   
    KIAA0924   368    FTCE-TCGKSFKRSMSLKVHSLQH    390  

PF00096.16.fs: domain 6 of 9, from 396 to 418: score 25.5, E = 4.1e-05
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C+  C+++F  k++L++H+ +H   
    KIAA0924   396    FRCE-NCDERFQYKYQLRSHMSIH    418  

PF00096.16.ls: domain 6 of 9, from 396 to 418: score 27.5, E = 4.4e-05
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C+  C+++F  k++L++H+ +H   
    KIAA0924   396    FRCE-NCDERFQYKYQLRSHMSIH    418  

PF00096.16.ls: domain 7 of 9, from 424 to 446: score 25.8, E = 0.00015
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C+  Cgk F+ k  +  H++tH   
    KIAA0924   424    FMCQ-WCGKDFNMKQYFDEHMKTH    446  

PF00096.16.fs: domain 7 of 9, from 424 to 446: score 23.8, E = 0.00011
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      ++C+  Cgk F+ k  +  H++tH   
    KIAA0924   424    FMCQ-WCGKDFNMKQYFDEHMKTH    446  

PF00096.16.ls: domain 8 of 9, from 452 to 474: score 36.5, E = 8.5e-08
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      + C+ +CgksF+++ n+krH+rtH   
    KIAA0924   452    FICE-ICGKSFTSRPNMKRHRRTH    474  

PF00096.16.fs: domain 8 of 9, from 452 to 474: score 34.5, E = 2.3e-07
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      + C+ +CgksF+++ n+krH+rtH   
    KIAA0924   452    FICE-ICGKSFTSRPNMKRHRRTH    474  

PF00096.16.ls: domain 9 of 9, from 480 to 502: score 24.4, E = 0.00038
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      y C+ +Cg++F+ +  Lk+H+ ++   
    KIAA0924   480    YPCD-VCGQRFRFSNMLKAHKEKC    502  

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