# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hk10347.fasta.nr -Q ../query/KIAA0906.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
KIAA0906, 923 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7827027 sequences
Expectation_n fit: rho(ln(x))= 5.6197+/-0.000185; mu= 11.6060+/- 0.010
mean_var=81.2584+/-16.009, 0's: 38 Z-trim: 40 B-trim: 8 in 1/63
Lambda= 0.142279
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 39, opt: 27, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|168273116|dbj|BAG10397.1| nucleoporin 210kDa [s (1887) 5944 1230.6 0
gi|18676550|dbj|BAB84927.1| FLJ00172 protein [Homo (1125) 5936 1228.8 0
gi|119584555|gb|EAW64151.1| nucleoporin 210kDa, is (1886) 5936 1228.9 0
gi|116242720|sp|Q8TEM1.3|PO210_HUMAN RecName: Full (1887) 5936 1228.9 0
gi|119584556|gb|EAW64152.1| nucleoporin 210kDa, is (1887) 5936 1228.9 0
gi|109034270|ref|XP_001083137.1| PREDICTED: simila (1887) 5856 1212.5 0
gi|30931086|gb|AAH52468.1| Nup210 protein [Mus mus (1842) 5029 1042.8 0
gi|97180293|sp|Q9QY81.2|PO210_MOUSE RecName: Full= (1886) 5029 1042.8 0
gi|148666876|gb|EDK99292.1| nucleoporin 210 [Mus m (1883) 5024 1041.7 0
gi|6650678|gb|AAF21969.1|AF113751_1 nuclear pore m (1886) 4999 1036.6 0
gi|121534|sp|P11654.1|PO210_RAT RecName: Full=Nucl (1886) 4975 1031.7 0
gi|126336534|ref|XP_001378689.1| PREDICTED: simila (1903) 4651 965.2 0
gi|118096826|ref|XP_414320.2| PREDICTED: similar t (1883) 4255 883.9 0
gi|73984954|ref|XP_541746.2| PREDICTED: similar to (3034) 3339 696.0 6.7e-197
gi|194221037|ref|XP_001914906.1| PREDICTED: simila (1839) 3080 642.7 4.5e-181
gi|189540327|ref|XP_699573.3| PREDICTED: im:714133 ( 917) 3044 635.1 4.3e-179
gi|50949320|emb|CAB55979.2| hypothetical protein [ ( 428) 2803 585.4 1.8e-164
gi|22761762|dbj|BAC11688.1| unnamed protein produc ( 418) 2714 567.1 5.7e-159
gi|47223214|emb|CAG11349.1| unnamed protein produc (1950) 2586 541.3 1.6e-150
gi|126307744|ref|XP_001372825.1| PREDICTED: simila (1901) 2431 509.5 5.9e-141
gi|73961648|ref|XP_547570.2| PREDICTED: similar to (1888) 2397 502.5 7.4e-139
gi|149751306|ref|XP_001495971.1| PREDICTED: nucleo (1887) 2390 501.1 2e-138
gi|74747057|sp|Q5VU65.1|P210L_HUMAN RecName: Full= (1888) 2370 497.0 3.4e-137
gi|34535319|dbj|BAC87279.1| unnamed protein produc (1423) 2366 496.1 4.8e-137
gi|109467041|ref|XP_001074975.1| PREDICTED: simila (1880) 2362 495.3 1.1e-136
gi|62643808|ref|XP_345235.2| PREDICTED: similar to (1881) 2362 495.3 1.1e-136
gi|194665312|ref|XP_001253717.2| PREDICTED: simila (1858) 2357 494.3 2.2e-136
gi|114559812|ref|XP_513837.2| PREDICTED: hypotheti (1888) 2355 493.9 2.9e-136
gi|94370127|ref|XP_622896.3| PREDICTED: similar to (1504) 2346 492.0 8.7e-136
gi|97180270|sp|Q9D2F7.2|P210L_MOUSE RecName: Full= (1881) 2346 492.0 1e-135
gi|34532201|dbj|BAC86345.1| unnamed protein produc (1591) 2339 490.5 2.5e-135
gi|21739549|emb|CAD38812.1| hypothetical protein [ (1081) 2293 481.0 1.3e-132
gi|118102172|ref|XP_001233384.1| PREDICTED: nucleo (1857) 2238 469.9 4.9e-129
gi|119573623|gb|EAW53238.1| nucleoporin 210kDa-lik (1587) 2071 435.5 8.9e-119
gi|114559814|ref|XP_001144608.1| PREDICTED: hypoth (1736) 2056 432.5 8.1e-118
gi|6599279|emb|CAB63757.1| hypothetical protein [H ( 684) 1809 381.5 7e-103
gi|55959264|emb|CAI14034.1| nucleoporin 210kDa-lik ( 669) 1798 379.2 3.3e-102
gi|210112018|gb|EEA59803.1| hypothetical protein B (1053) 1787 377.1 2.3e-101
gi|115653053|ref|XP_782857.2| PREDICTED: similar t (1872) 1663 351.8 1.7e-93
gi|210131363|gb|EEA79032.1| hypothetical protein B (1726) 1457 309.5 8.3e-81
gi|156218747|gb|EDO39640.1| predicted protein [Nem (1623) 1201 257.0 5.2e-65
gi|74178743|dbj|BAE34024.1| unnamed protein produc (1160) 1048 225.5 1.1e-55
gi|190588723|gb|EDV28745.1| hypothetical protein T (1883) 966 208.8 1.9e-50
gi|215504456|gb|EEC13950.1| conserved hypothetical ( 530) 944 203.9 1.6e-49
gi|198414653|ref|XP_002121532.1| PREDICTED: simila (1445) 716 157.4 4.4e-35
gi|149048010|gb|EDM00586.1| similar to hypothetica (1425) 710 156.1 1e-34
gi|148683217|gb|EDL15164.1| mCG22220 [Mus musculus (1385) 704 154.9 2.4e-34
gi|22218318|gb|AAM94631.1| integral membrane nucle ( 272) 660 145.4 3.3e-32
gi|56566056|gb|AAV98364.1| nuclear pore protein gp ( 240) 654 144.1 7.1e-32
gi|193706932|ref|XP_001943365.1| PREDICTED: simila (1801) 614 136.5 1.1e-28
>>gi|168273116|dbj|BAG10397.1| nucleoporin 210kDa [synth (1887 aa)
initn: 5944 init1: 5944 opt: 5944 Z-score: 6584.0 bits: 1230.6 E(): 0
Smith-Waterman score: 5944; 99.892% identity (100.000% similar) in 923 aa overlap (1-923:965-1887)
10 20 30
KIAA09 FPAPAKAVVYVSDIQELYIRVVDKVEIGKT
::::::::::::::::::::::::::::::
gi|168 VAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAVVYVSDIQELYIRVVDKVEIGKT
940 950 960 970 980 990
40 50 60 70 80 90
KIAA09 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
1000 1010 1020 1030 1040 1050
100 110 120 130 140 150
KIAA09 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
1060 1070 1080 1090 1100 1110
160 170 180 190 200 210
KIAA09 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
1120 1130 1140 1150 1160 1170
220 230 240 250 260 270
KIAA09 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
1180 1190 1200 1210 1220 1230
280 290 300 310 320 330
KIAA09 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
1240 1250 1260 1270 1280 1290
340 350 360 370 380 390
KIAA09 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
1300 1310 1320 1330 1340 1350
400 410 420 430 440 450
KIAA09 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
1360 1370 1380 1390 1400 1410
460 470 480 490 500 510
KIAA09 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
1420 1430 1440 1450 1460 1470
520 530 540 550 560 570
KIAA09 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
1480 1490 1500 1510 1520 1530
580 590 600 610 620 630
KIAA09 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
1540 1550 1560 1570 1580 1590
640 650 660 670 680 690
KIAA09 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
1600 1610 1620 1630 1640 1650
700 710 720 730 740 750
KIAA09 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
1660 1670 1680 1690 1700 1710
760 770 780 790 800 810
KIAA09 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVSDPAAGSQGPLSTTLTFSSPVTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVSDPAAGSQGPLSTTLTFSSPVTN
1720 1730 1740 1750 1760 1770
820 830 840 850 860 870
KIAA09 QAIAIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
gi|168 QAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
1780 1790 1800 1810 1820 1830
880 890 900 910 920
KIAA09 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
1840 1850 1860 1870 1880
>>gi|18676550|dbj|BAB84927.1| FLJ00172 protein [Homo sap (1125 aa)
initn: 5936 init1: 5936 opt: 5936 Z-score: 6578.4 bits: 1228.8 E(): 0
Smith-Waterman score: 5936; 99.783% identity (99.892% similar) in 923 aa overlap (1-923:203-1125)
10 20 30
KIAA09 FPAPAKAVVYVSDIQELYIRVVDKVEIGKT
::::::::::::::::::::::::::::::
gi|186 VAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAVVYVSDIQELYIRVVDKVEIGKT
180 190 200 210 220 230
40 50 60 70 80 90
KIAA09 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
240 250 260 270 280 290
100 110 120 130 140 150
KIAA09 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
300 310 320 330 340 350
160 170 180 190 200 210
KIAA09 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
360 370 380 390 400 410
220 230 240 250 260 270
KIAA09 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
420 430 440 450 460 470
280 290 300 310 320 330
KIAA09 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
480 490 500 510 520 530
340 350 360 370 380 390
KIAA09 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
540 550 560 570 580 590
400 410 420 430 440 450
KIAA09 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
600 610 620 630 640 650
460 470 480 490 500 510
KIAA09 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
660 670 680 690 700 710
520 530 540 550 560 570
KIAA09 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
720 730 740 750 760 770
580 590 600 610 620 630
KIAA09 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
780 790 800 810 820 830
640 650 660 670 680 690
KIAA09 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
840 850 860 870 880 890
700 710 720 730 740 750
KIAA09 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
900 910 920 930 940 950
760 770 780 790 800 810
KIAA09 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVSDPAAGSQGPLSTTLTFSSPVTN
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
gi|186 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVLDPAAGSQGPLSTTLTFSSPVTN
960 970 980 990 1000 1010
820 830 840 850 860 870
KIAA09 QAIAIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
gi|186 QAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
1020 1030 1040 1050 1060 1070
880 890 900 910 920
KIAA09 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
1080 1090 1100 1110 1120
>>gi|119584555|gb|EAW64151.1| nucleoporin 210kDa, isofor (1886 aa)
initn: 5936 init1: 5936 opt: 5936 Z-score: 6575.2 bits: 1228.9 E(): 0
Smith-Waterman score: 5936; 99.783% identity (99.892% similar) in 923 aa overlap (1-923:964-1886)
10 20 30
KIAA09 FPAPAKAVVYVSDIQELYIRVVDKVEIGKT
::::::::::::::::::::::::::::::
gi|119 VAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAVVYVSDIQELYIRVVDKVEIGKT
940 950 960 970 980 990
40 50 60 70 80 90
KIAA09 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
1000 1010 1020 1030 1040 1050
100 110 120 130 140 150
KIAA09 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
1060 1070 1080 1090 1100 1110
160 170 180 190 200 210
KIAA09 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
1120 1130 1140 1150 1160 1170
220 230 240 250 260 270
KIAA09 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
1180 1190 1200 1210 1220 1230
280 290 300 310 320 330
KIAA09 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
1240 1250 1260 1270 1280 1290
340 350 360 370 380 390
KIAA09 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
1300 1310 1320 1330 1340 1350
400 410 420 430 440 450
KIAA09 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
1360 1370 1380 1390 1400 1410
460 470 480 490 500 510
KIAA09 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
1420 1430 1440 1450 1460 1470
520 530 540 550 560 570
KIAA09 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
1480 1490 1500 1510 1520 1530
580 590 600 610 620 630
KIAA09 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
1540 1550 1560 1570 1580 1590
640 650 660 670 680 690
KIAA09 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
1600 1610 1620 1630 1640 1650
700 710 720 730 740 750
KIAA09 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
1660 1670 1680 1690 1700 1710
760 770 780 790 800 810
KIAA09 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVSDPAAGSQGPLSTTLTFSSPVTN
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
gi|119 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVLDPAAGSQGPLSTTLTFSSPVTN
1720 1730 1740 1750 1760 1770
820 830 840 850 860 870
KIAA09 QAIAIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
gi|119 QAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
1780 1790 1800 1810 1820 1830
880 890 900 910 920
KIAA09 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
1840 1850 1860 1870 1880
>>gi|116242720|sp|Q8TEM1.3|PO210_HUMAN RecName: Full=Nuc (1887 aa)
initn: 5936 init1: 5936 opt: 5936 Z-score: 6575.2 bits: 1228.9 E(): 0
Smith-Waterman score: 5936; 99.783% identity (99.892% similar) in 923 aa overlap (1-923:965-1887)
10 20 30
KIAA09 FPAPAKAVVYVSDIQELYIRVVDKVEIGKT
::::::::::::::::::::::::::::::
gi|116 VAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAVVYVSDIQELYIRVVDKVEIGKT
940 950 960 970 980 990
40 50 60 70 80 90
KIAA09 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
1000 1010 1020 1030 1040 1050
100 110 120 130 140 150
KIAA09 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
1060 1070 1080 1090 1100 1110
160 170 180 190 200 210
KIAA09 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
1120 1130 1140 1150 1160 1170
220 230 240 250 260 270
KIAA09 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
1180 1190 1200 1210 1220 1230
280 290 300 310 320 330
KIAA09 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
1240 1250 1260 1270 1280 1290
340 350 360 370 380 390
KIAA09 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
1300 1310 1320 1330 1340 1350
400 410 420 430 440 450
KIAA09 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
1360 1370 1380 1390 1400 1410
460 470 480 490 500 510
KIAA09 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
1420 1430 1440 1450 1460 1470
520 530 540 550 560 570
KIAA09 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
1480 1490 1500 1510 1520 1530
580 590 600 610 620 630
KIAA09 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
1540 1550 1560 1570 1580 1590
640 650 660 670 680 690
KIAA09 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
1600 1610 1620 1630 1640 1650
700 710 720 730 740 750
KIAA09 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
1660 1670 1680 1690 1700 1710
760 770 780 790 800 810
KIAA09 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVSDPAAGSQGPLSTTLTFSSPVTN
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
gi|116 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVLDPAAGSQGPLSTTLTFSSPVTN
1720 1730 1740 1750 1760 1770
820 830 840 850 860 870
KIAA09 QAIAIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
gi|116 QAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
1780 1790 1800 1810 1820 1830
880 890 900 910 920
KIAA09 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
1840 1850 1860 1870 1880
>>gi|119584556|gb|EAW64152.1| nucleoporin 210kDa, isofor (1887 aa)
initn: 5936 init1: 5936 opt: 5936 Z-score: 6575.2 bits: 1228.9 E(): 0
Smith-Waterman score: 5936; 99.783% identity (99.892% similar) in 923 aa overlap (1-923:965-1887)
10 20 30
KIAA09 FPAPAKAVVYVSDIQELYIRVVDKVEIGKT
::::::::::::::::::::::::::::::
gi|119 VAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAVVYVSDIQELYIRVVDKVEIGKT
940 950 960 970 980 990
40 50 60 70 80 90
KIAA09 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
1000 1010 1020 1030 1040 1050
100 110 120 130 140 150
KIAA09 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
1060 1070 1080 1090 1100 1110
160 170 180 190 200 210
KIAA09 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
1120 1130 1140 1150 1160 1170
220 230 240 250 260 270
KIAA09 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
1180 1190 1200 1210 1220 1230
280 290 300 310 320 330
KIAA09 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
1240 1250 1260 1270 1280 1290
340 350 360 370 380 390
KIAA09 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
1300 1310 1320 1330 1340 1350
400 410 420 430 440 450
KIAA09 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
1360 1370 1380 1390 1400 1410
460 470 480 490 500 510
KIAA09 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
1420 1430 1440 1450 1460 1470
520 530 540 550 560 570
KIAA09 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
1480 1490 1500 1510 1520 1530
580 590 600 610 620 630
KIAA09 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
1540 1550 1560 1570 1580 1590
640 650 660 670 680 690
KIAA09 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
1600 1610 1620 1630 1640 1650
700 710 720 730 740 750
KIAA09 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
1660 1670 1680 1690 1700 1710
760 770 780 790 800 810
KIAA09 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVSDPAAGSQGPLSTTLTFSSPVTN
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
gi|119 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVLDPAAGSQGPLSTTLTFSSPVTN
1720 1730 1740 1750 1760 1770
820 830 840 850 860 870
KIAA09 QAIAIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
gi|119 QAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
1780 1790 1800 1810 1820 1830
880 890 900 910 920
KIAA09 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
1840 1850 1860 1870 1880
>>gi|109034270|ref|XP_001083137.1| PREDICTED: similar to (1887 aa)
initn: 5856 init1: 5856 opt: 5856 Z-score: 6486.4 bits: 1212.5 E(): 0
Smith-Waterman score: 5856; 97.725% identity (99.892% similar) in 923 aa overlap (1-923:965-1887)
10 20 30
KIAA09 FPAPAKAVVYVSDIQELYIRVVDKVEIGKT
::::::::::::::::::::::::::::::
gi|109 VAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAVVYVSDIQELYIRVVDKVEIGKT
940 950 960 970 980 990
40 50 60 70 80 90
KIAA09 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
:::::::::::::::::::::::::::.:::::::::::::.::::::::::.::.::::
gi|109 VKAYVRVLDLHKKPFLAKYFPFMDLKLQAASPIITLVALDEVLDNYTITFLIHGVTIGQT
1000 1010 1020 1030 1040 1050
100 110 120 130 140 150
KIAA09 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
1060 1070 1080 1090 1100 1110
160 170 180 190 200 210
KIAA09 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
::::::::::::::.:::.:::::::::::::::::::::::::::::::::::::::::
gi|109 SNESVALVSAAGLVRGLAVGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
1120 1130 1140 1150 1160 1170
220 230 240 250 260 270
KIAA09 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
gi|109 PIMRMRTGTQMPVYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
1180 1190 1200 1210 1220 1230
280 290 300 310 320 330
KIAA09 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
gi|109 SQYNFAMNVLGRVKGRTGLRVVVKPVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
1240 1250 1260 1270 1280 1290
340 350 360 370 380 390
KIAA09 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
1300 1310 1320 1330 1340 1350
400 410 420 430 440 450
KIAA09 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
1360 1370 1380 1390 1400 1410
460 470 480 490 500 510
KIAA09 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
:::::.:::::::::::::::::::::::::::::::::::::::::::::::::.::::
gi|109 VFHAHNSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFVPLPV
1420 1430 1440 1450 1460 1470
520 530 540 550 560 570
KIAA09 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
1480 1490 1500 1510 1520 1530
580 590 600 610 620 630
KIAA09 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
gi|109 VYYEVAGHLRTYKEVVVGVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
1540 1550 1560 1570 1580 1590
640 650 660 670 680 690
KIAA09 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
::::::::::::.::::::::::::::::::::::::::::.::::::::::::::::::
gi|109 TQREVIQALHPEALISCQSQFKPAVFDFPSQDVFTVEPQFDAALGQYFCSITMHRLTDKQ
1600 1610 1620 1630 1640 1650
700 710 720 730 740 750
KIAA09 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
:::::::::::::.::::::::::::::::::::::::::::::::::::::::.:::::
gi|109 RKHLSMKKTALVVTASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEVRVFGA
1660 1670 1680 1690 1700 1710
760 770 780 790 800 810
KIAA09 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVSDPAAGSQGPLSTTLTFSSPVTN
::::::::::::::::::::::::.:::::::::::.:::.::::::::::::::::.::
gi|109 PEVLENLEVKSGSPAVLAFAKEKSLGWPSFITYTVGISDPVAGSQGPLSTTLTFSSPATN
1720 1730 1740 1750 1760 1770
820 830 840 850 860 870
KIAA09 QAIAIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 QAITIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
1780 1790 1800 1810 1820 1830
880 890 900 910 920
KIAA09 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|109 RDLAVPTALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
1840 1850 1860 1870 1880
>>gi|30931086|gb|AAH52468.1| Nup210 protein [Mus musculu (1842 aa)
initn: 4942 init1: 4885 opt: 5029 Z-score: 5569.1 bits: 1042.8 E(): 0
Smith-Waterman score: 5029; 81.798% identity (95.450% similar) in 923 aa overlap (1-923:921-1842)
10 20 30
KIAA09 FPAPAKAVVYVSDIQELYIRVVDKVEIGKT
:::::::...::::::::.::::::::::.
gi|309 VAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPAKAIIHVSDIQELYVRVVDKVEIGKA
900 910 920 930 940 950
40 50 60 70 80 90
KIAA09 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
:::::::::..::::::::: ::::::.::: :::::.::::::::: :::..:::::::
gi|309 VKAYVRVLDFYKKPFLAKYFTFMDLKLQAASQIITLVTLDEALDNYTATFLVHGVAIGQT
960 970 980 990 1000 1010
100 110 120 130 140 150
KIAA09 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
::.::::.:.:::..:.::::::::::::.::::::.::: ::.::::::::::::::::
gi|309 SLSASVTDKSGQRVSSTPQQIEVFPPFRLIPRKVTLIIGAMMQITSEGGPQPQSNILFSI
1020 1030 1040 1050 1060 1070
160 170 180 190 200 210
KIAA09 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
.::::: ::..:::.:: .:::.: :.:::::::::::.:.:::::.:::: :.::::::
gi|309 NNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKVIIVSQDLVEVEVLQLQAVRIRA
1080 1090 1100 1110 1120 1130
220 230 240 250 260 270
KIAA09 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
:: :::::::::..:::::..:.:::::::::::::::::::::::::::::::.:::::
gi|309 PITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEVSIRLP
1140 1150 1160 1170 1180 1190
280 290 300 310 320 330
KIAA09 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
:::::::: :::::::::::::::.:::.:::.::..:::::::.::::::.:::::::
gi|309 PQYNFAMNVYGRVKGRTGLRVVVKALDPTAGQLHGLGKELSDEIQIQVFEKLRLLNPEIE
1200 1210 1220 1230 1240 1250
340 350 360 370 380 390
KIAA09 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
::::::::::.::::::::::: :::::::::::.:.::.::::::.::: ::.::.:::
gi|309 AEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIVHTDEKGFLVSGSGIGVSTLEVI
1260 1270 1280 1290 1300 1310
400 410 420 430 440 450
KIAA09 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
::::::.::::.::::::::::::.:::::::::.::::.:.:::::::: :::::.:::
gi|309 AQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEALTALPLGMTVTFIVHFHDSSGD
1320 1330 1340 1350 1360 1370
460 470 480 490 500 510
KIAA09 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
.::::.:::::::::::::::::: :::::..::::::::::.:::.:: :::::.::::
gi|309 IFHAHNSVLNFATNRDDFVQIGKGATNNTCIIRTVSVGLTLLHVWDVEHLGLSDFVPLPV
1380 1390 1400 1410 1420 1430
520 530 540 550 560 570
KIAA09 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
::::.::::::.::::.::::.::::: :.::::::::. .:..:::::::.:: .::::
gi|309 LQAITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSASHVLYVDPKTGVAIARDAGSVT
1440 1450 1460 1470 1480 1490
580 590 600 610 620 630
KIAA09 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
::::.::.:.:.::.::..::.:.::.:: :::.:::::::: :.:::::::: :::.:
gi|309 VYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEATASKVTVSVGDRSSNLLGECSP
1500 1510 1520 1530 1540 1550
640 650 660 670 680 690
KIAA09 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
.:::.:.:::::.::::: ::: :::::. ::::::: ::.:::::.::.::.::::::
gi|309 AQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEPGFDAALGQYLCSVTMRRLTDKQ
1560 1570 1580 1590 1600 1610
700 710 720 730 740 750
KIAA09 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
:::.::::.:.:.::. ::. :.:.:::::::::::.:.::::::::::::::..::::
gi|309 LKHLNMKKTSLAVTASIPSSYTSVEKVGAEVPFSPGLYANQAEILLSNHYTSSEVKVFGA
1620 1630 1640 1650 1660 1670
760 770 780 790 800 810
KIAA09 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVSDPAAGSQGPLSTTLTFSSPVTN
: ::::::::::::::::.:::::: :::::::::: ::.:::::::::.::::::.::
gi|309 VESLENLEVKSGSPAVLAFVKEKSFGLPSFITYTVGVLDPTAGSQGPLSTALTFSSPATN
1680 1690 1700 1710 1720 1730
820 830 840 850 860 870
KIAA09 QAIAIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
:::.::::::::.::::::::::::..::::::::::::.::::::::: ::::::::.:
gi|309 QAITIPVTVAFVLDRRGPGPYGASLLSHFLDSYQVMFFTFFALLAGTAVTIIAYHTVCAP
1740 1750 1760 1770 1780 1790
880 890 900 910 920
KIAA09 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
:.:: : :::::::: :::::.: :::.. :.:: .:::::::::::::::::
gi|309 RELASPLALTPRASPQHSPHYLA-SSPAAFNTLPSGRKASPPSGLWSPAYASH
1800 1810 1820 1830 1840
>>gi|97180293|sp|Q9QY81.2|PO210_MOUSE RecName: Full=Nucl (1886 aa)
initn: 4942 init1: 4885 opt: 5029 Z-score: 5569.0 bits: 1042.8 E(): 0
Smith-Waterman score: 5029; 81.798% identity (95.450% similar) in 923 aa overlap (1-923:965-1886)
10 20 30
KIAA09 FPAPAKAVVYVSDIQELYIRVVDKVEIGKT
:::::::...::::::::.::::::::::.
gi|971 VAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPAKAIIHVSDIQELYVRVVDKVEIGKA
940 950 960 970 980 990
40 50 60 70 80 90
KIAA09 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
:::::::::..::::::::: ::::::.::: :::::.::::::::: :::..:::::::
gi|971 VKAYVRVLDFYKKPFLAKYFTFMDLKLQAASQIITLVTLDEALDNYTATFLVHGVAIGQT
1000 1010 1020 1030 1040 1050
100 110 120 130 140 150
KIAA09 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
::.::::.:.:::..:.::::::::::::.::::::.::: ::.::::::::::::::::
gi|971 SLSASVTDKSGQRVSSTPQQIEVFPPFRLIPRKVTLIIGAMMQITSEGGPQPQSNILFSI
1060 1070 1080 1090 1100 1110
160 170 180 190 200 210
KIAA09 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
.::::: ::..:::.:: .:::.: :.:::::::::::.:.:::::.:::: :.::::::
gi|971 NNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKVIIVSQDLVEVEVLQLQAVRIRA
1120 1130 1140 1150 1160 1170
220 230 240 250 260 270
KIAA09 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
:: :::::::::..:::::..:.:::::::::::::::::::::::::::::::.:::::
gi|971 PITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEVSIRLP
1180 1190 1200 1210 1220 1230
280 290 300 310 320 330
KIAA09 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
:::::::: :::::::::::::::.:::.:::.::..:::::::.::::::.:::::::
gi|971 PQYNFAMNVYGRVKGRTGLRVVVKALDPTAGQLHGLGKELSDEIQIQVFEKLRLLNPEIE
1240 1250 1260 1270 1280 1290
340 350 360 370 380 390
KIAA09 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
::::::::::.::::::::::: :::::::::::.:.::.::::::.::: ::.::.:::
gi|971 AEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIVHTDEKGFLVSGSGIGVSTLEVI
1300 1310 1320 1330 1340 1350
400 410 420 430 440 450
KIAA09 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
::::::.::::.::::::::::::.:::::::::.::::.:.:::::::: :::::.:::
gi|971 AQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEALTALPLGMTVTFIVHFHDSSGD
1360 1370 1380 1390 1400 1410
460 470 480 490 500 510
KIAA09 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
.::::.:::::::::::::::::: :::::..::::::::::.:::.:: :::::.::::
gi|971 IFHAHNSVLNFATNRDDFVQIGKGATNNTCIIRTVSVGLTLLHVWDVEHLGLSDFVPLPV
1420 1430 1440 1450 1460 1470
520 530 540 550 560 570
KIAA09 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
::::.::::::.::::.::::.::::: :.::::::::. .:..:::::::.:: .::::
gi|971 LQAITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSASHVLYVDPKTGVAIARDAGSVT
1480 1490 1500 1510 1520 1530
580 590 600 610 620 630
KIAA09 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
::::.::.:.:.::.::..::.:.::.:: :::.:::::::: :.:::::::: :::.:
gi|971 VYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEATASKVTVSVGDRSSNLLGECSP
1540 1550 1560 1570 1580 1590
640 650 660 670 680 690
KIAA09 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
.:::.:.:::::.::::: ::: :::::. ::::::: ::.:::::.::.::.::::::
gi|971 AQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEPGFDAALGQYLCSVTMRRLTDKQ
1600 1610 1620 1630 1640 1650
700 710 720 730 740 750
KIAA09 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
:::.::::.:.:.::. ::. :.:.:::::::::::.:.::::::::::::::..::::
gi|971 LKHLNMKKTSLAVTASIPSSYTSVEKVGAEVPFSPGLYANQAEILLSNHYTSSEVKVFGA
1660 1670 1680 1690 1700 1710
760 770 780 790 800 810
KIAA09 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVSDPAAGSQGPLSTTLTFSSPVTN
: ::::::::::::::::.:::::: :::::::::: ::.:::::::::.::::::.::
gi|971 VESLENLEVKSGSPAVLAFVKEKSFGLPSFITYTVGVLDPTAGSQGPLSTALTFSSPATN
1720 1730 1740 1750 1760 1770
820 830 840 850 860 870
KIAA09 QAIAIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
:::.::::::::.::::::::::::..::::::::::::.::::::::: ::::::::.:
gi|971 QAITIPVTVAFVLDRRGPGPYGASLLSHFLDSYQVMFFTFFALLAGTAVTIIAYHTVCAP
1780 1790 1800 1810 1820 1830
880 890 900 910 920
KIAA09 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
:.:: : :::::::: :::::.: :::.. :.:: .:::::::::::::::::
gi|971 RELASPLALTPRASPQHSPHYLA-SSPAAFNTLPSGRKASPPSGLWSPAYASH
1840 1850 1860 1870 1880
>>gi|148666876|gb|EDK99292.1| nucleoporin 210 [Mus muscu (1883 aa)
initn: 4936 init1: 4880 opt: 5024 Z-score: 5563.5 bits: 1041.7 E(): 0
Smith-Waterman score: 5024; 81.690% identity (95.450% similar) in 923 aa overlap (1-923:962-1883)
10 20 30
KIAA09 FPAPAKAVVYVSDIQELYIRVVDKVEIGKT
::::.::...::::::::.::::::::::.
gi|148 VAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPTKAIIHVSDIQELYVRVVDKVEIGKA
940 950 960 970 980 990
40 50 60 70 80 90
KIAA09 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
:::::::::..::::::::: ::::::.::: :::::.::::::::: :::..:::::::
gi|148 VKAYVRVLDFYKKPFLAKYFTFMDLKLQAASQIITLVTLDEALDNYTATFLVHGVAIGQT
1000 1010 1020 1030 1040 1050
100 110 120 130 140 150
KIAA09 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
::.::::.:.:::..:.::::::::::::.::::::.::: ::.::::::::::::::::
gi|148 SLSASVTDKSGQRVSSTPQQIEVFPPFRLIPRKVTLIIGAMMQITSEGGPQPQSNILFSI
1060 1070 1080 1090 1100 1110
160 170 180 190 200 210
KIAA09 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
.::::: ::..:::.:: .:::.: :.:::::::::::.:.:::::.:::: :.::::::
gi|148 NNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKVIIVSQDLVEVEVLQLQAVRIRA
1120 1130 1140 1150 1160 1170
220 230 240 250 260 270
KIAA09 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
:: :::::::::..:::::..:.:::::::::::::::::::::::::::::::.:::::
gi|148 PITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEVSIRLP
1180 1190 1200 1210 1220 1230
280 290 300 310 320 330
KIAA09 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
:::::::: :::::::::::::::.:::.:::.::..:::::::.::::::.:::::::
gi|148 PQYNFAMNVYGRVKGRTGLRVVVKALDPTAGQLHGLGKELSDEIQIQVFEKLRLLNPEIE
1240 1250 1260 1270 1280 1290
340 350 360 370 380 390
KIAA09 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
::::::::::.::::::::::: :::::::::::.:.::.::::::.::: ::.::.:::
gi|148 AEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIVHTDEKGFLVSGSGIGVSTLEVI
1300 1310 1320 1330 1340 1350
400 410 420 430 440 450
KIAA09 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
::::::.::::.::::::::::::.:::::::::.::::.:.:::::::: :::::.:::
gi|148 AQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEALTALPLGMTVTFIVHFHDSSGD
1360 1370 1380 1390 1400 1410
460 470 480 490 500 510
KIAA09 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
.::::.:::::::::::::::::: :::::..::::::::::.:::.:: :::::.::::
gi|148 IFHAHNSVLNFATNRDDFVQIGKGATNNTCIIRTVSVGLTLLHVWDVEHLGLSDFVPLPV
1420 1430 1440 1450 1460 1470
520 530 540 550 560 570
KIAA09 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
::::.::::::.::::.::::.::::: :.::::::::. .:..:::::::.:: .::::
gi|148 LQAITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSASHVLYVDPKTGVAIARDAGSVT
1480 1490 1500 1510 1520 1530
580 590 600 610 620 630
KIAA09 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
::::.::.:.:.::.::..::.:.::.:: :::.:::::::: :.:::::::: :::.:
gi|148 VYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEATASKVTVSVGDRSSNLLGECSP
1540 1550 1560 1570 1580 1590
640 650 660 670 680 690
KIAA09 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
.:::.:.:::::.::::: ::: :::::. ::::::: ::.:::::.::.::.::::::
gi|148 AQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEPGFDAALGQYLCSVTMRRLTDKQ
1600 1610 1620 1630 1640 1650
700 710 720 730 740 750
KIAA09 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
:::.::::.:.:.::. ::. :.:.:::::::::::.:.::::::::::::::..::::
gi|148 LKHLNMKKTSLAVTASIPSSYTSVEKVGAEVPFSPGLYANQAEILLSNHYTSSEVKVFGA
1660 1670 1680 1690 1700 1710
760 770 780 790 800 810
KIAA09 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVSDPAAGSQGPLSTTLTFSSPVTN
: ::::::::::::::::.:::::: :::::::::: ::.:::::::::.::::::.::
gi|148 VESLENLEVKSGSPAVLAFVKEKSFGLPSFITYTVGVLDPTAGSQGPLSTALTFSSPATN
1720 1730 1740 1750 1760 1770
820 830 840 850 860 870
KIAA09 QAIAIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
:::.::::::::.::::::::::::..::::::::::::.::::::::: ::::::::.:
gi|148 QAITIPVTVAFVLDRRGPGPYGASLLSHFLDSYQVMFFTFFALLAGTAVTIIAYHTVCAP
1780 1790 1800 1810 1820 1830
880 890 900 910 920
KIAA09 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
:.:: : :::::::: :::::.: :::.. :.:: .:::::::::::::::::
gi|148 RELASPLALTPRASPQHSPHYLA-SSPAAFNTLPSGRKASPPSGLWSPAYASH
1840 1850 1860 1870 1880
>>gi|6650678|gb|AAF21969.1|AF113751_1 nuclear pore membr (1886 aa)
initn: 4911 init1: 4855 opt: 4999 Z-score: 5535.7 bits: 1036.6 E(): 0
Smith-Waterman score: 4999; 81.257% identity (95.125% similar) in 923 aa overlap (1-923:965-1886)
10 20 30
KIAA09 FPAPAKAVVYVSDIQELYIRVVDKVEIGKT
:::::::.. .:::::::.::::::::::.
gi|665 VAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPAKAIIQLSDIQELYVRVVDKVEIGKA
940 950 960 970 980 990
40 50 60 70 80 90
KIAA09 VKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQT
:::::::::..::::::::: ::::. .::: :::::.::::::::: :::..: :::::
gi|665 VKAYVRVLDFYKKPFLAKYFTFMDLNWQAASQIITLVTLDEALDNYTATFLVHGCAIGQT
1000 1010 1020 1030 1040 1050
100 110 120 130 140 150
KIAA09 SLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSI
::.::::.:.:::..:.::::::::::::.::::::.::: ::.::::::::::::::::
gi|665 SLSASVTDKSGQRVSSTPQQIEVFPPFRLIPRKVTLIIGAMMQITSEGGPQPQSNILFSI
1060 1070 1080 1090 1100 1110
160 170 180 190 200 210
KIAA09 SNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRA
.::::: ::..:::.:: .:::.: :.:::::::::::.:.:::::.:::: :.::::::
gi|665 NNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKVIIVSQDLVEVEVLQLQAVRIRA
1120 1130 1140 1150 1160 1170
220 230 240 250 260 270
KIAA09 PIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLP
:: :::::::::..:::::..:.:::::::::::::::::::::::::::::::.:::::
gi|665 PITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEVSIRLP
1180 1190 1200 1210 1220 1230
280 290 300 310 320 330
KIAA09 SQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIE
:::::::: :::::::::::.:::.:::.:::.::..:::::::.::::::.:::::::
gi|665 PQYNFAMNVYGRVKGRTGLRVLVKALDPTAGQLHGLGKELSDEIQIQVFEKLRLLNPEIE
1240 1250 1260 1270 1280 1290
340 350 360 370 380 390
KIAA09 AEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVI
::::::::::.::::::::::: :::::::::::.:.::.::::::.::: ::.::.:::
gi|665 AEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIVHTDEKGFLVSGSGIGVSTLEVI
1300 1310 1320 1330 1340 1350
400 410 420 430 440 450
KIAA09 AQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGD
::::::.::::.::::::::::::.:::::::::.::::.:.:::::::: :::::.:::
gi|665 AQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEALTALPLGMTVTFIVHFHDSSGD
1360 1370 1380 1390 1400 1410
460 470 480 490 500 510
KIAA09 VFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPV
.::::.:::::::::::::::::: :::::..::::::::::.:::.:: :::::.::::
gi|665 IFHAHNSVLNFATNRDDFVQIGKGATNNTCIIRTVSVGLTLLHVWDVEHLGLSDFVPLPV
1420 1430 1440 1450 1460 1470
520 530 540 550 560 570
KIAA09 LQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVT
::::.::::::.::::.::::.::::: :.::::::::. .:..:::::::.:: .::::
gi|665 LQAITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSASHVLYVDPKTGVAIARDAGSVT
1480 1490 1500 1510 1520 1530
580 590 600 610 620 630
KIAA09 VYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTP
::::.::.:.:.::.::..::.:.::.:: :::.:::::::: :.:::::::: :::.:
gi|665 VYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEATASKVTVSVGDRSSNLLGECSP
1540 1550 1560 1570 1580 1590
640 650 660 670 680 690
KIAA09 TQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQ
.:::.:.:::::.::::: ::: :::::. ::::::: ::.:::::.::.::.::::::
gi|665 AQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEPGFDAALGQYLCSVTMRRLTDKQ
1600 1610 1620 1630 1640 1650
700 710 720 730 740 750
KIAA09 RKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGA
:::.::::.:.:.::. ::. :.:.:::::::::::.:.::::::::::::::..::::
gi|665 LKHLNMKKTSLAVTASIPSSYTSVEKVGAEVPFSPGLYANQAEILLSNHYTSSEVKVFGA
1660 1670 1680 1690 1700 1710
760 770 780 790 800 810
KIAA09 PEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVSDPAAGSQGPLSTTLTFSSPVTN
: ::::::::::::::::.:::::: :::::::::: ::.:::::::::.::::::.::
gi|665 VESLENLEVKSGSPAVLAFVKEKSFGLPSFITYTVGVLDPTAGSQGPLSTALTFSSPATN
1720 1730 1740 1750 1760 1770
820 830 840 850 860 870
KIAA09 QAIAIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTP
:::.::::::::.::::::::::::..::::::::::::.::::::::: ::::::::.:
gi|665 QAITIPVTVAFVLDRRGPGPYGASLLSHFLDSYQVMFFTFFALLAGTAVTIIAYHTVCAP
1780 1790 1800 1810 1820 1830
880 890 900 910 920
KIAA09 RDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
:.:: : :::::::: :::::.: :::.. :.:: .:::::::::::::::::
gi|665 RELASPLALTPRASPQHSPHYLA-SSPAAFNTLPSGRKASPPSGLWSPAYASH
1840 1850 1860 1870 1880
923 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (8 proc)
start: Fri Mar 6 05:16:38 2009 done: Fri Mar 6 05:20:07 2009
Total Scan time: 1681.890 Total Display time: 0.850
Function used was FASTA [version 34.26.5 April 26, 2007]