hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16214577/chunk_1/iprscan-20080502-16214577.nocrc
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Query sequence: KIAA0903
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00307.21.ls Calponin homology (CH) domain                  111.4    2.5e-30   1
PF00307.21.fs Calponin homology (CH) domain                  109.5    9.3e-30   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00307.21.fs   1/1     175   279 ..     1   122 []   109.5  9.3e-30
PF00307.21.ls   1/1     175   279 ..     1   122 []   111.4  2.5e-30

Alignments of top-scoring domains:
PF00307.21.fs: domain 1 of 1, from 175 to 279: score 109.5, E = 9.3e-30
                   *->sqekellrWvnsvlagypgnkdtlPippvritnfftdwlkDGlaLca
                       + + ll W+++v+++y+g         v+itnf+t+w+ +Gl +ca
    KIAA0903   175    NASQSLLVWCKEVTKNYRG---------VKITNFTTSWR-NGLSFCA 211  

                   LlnklrPglidkkkvpslsrfdkleNlnlaldaaekeGlgiilvlidpeD
                   +l+++rP+lid+k   sl+++d  eN ++a d + ++G  i  +l++p D
    KIAA0903   212 ILHHFRPDLIDYK---SLNPQDIKENNKKAYDGFASIG--I-SRLLEPSD 255  

                   ivegnpdPDeklvltllwqLirrfq<-*
                   +v     PD++ v+t+l q+  +f+   
    KIAA0903   256 MVLLAI-PDKLTVMTYLYQIRAHFS    279  

PF00307.21.ls: domain 1 of 1, from 175 to 279: score 111.4, E = 2.5e-30
                   *->sqekellrWvnsvlagypgnkdtlPippvritnfftdwlkDGlaLca
                       + + ll W+++v+++y+g         v+itnf+t+w+ +Gl +ca
    KIAA0903   175    NASQSLLVWCKEVTKNYRG---------VKITNFTTSWR-NGLSFCA 211  

                   LlnklrPglidkkkvpslsrfdkleNlnlaldaaekeGlgiilvlidpeD
                   +l+++rP+lid+k   sl+++d  eN ++a d + ++G  i  +l++p D
    KIAA0903   212 ILHHFRPDLIDYK---SLNPQDIKENNKKAYDGFASIG--I-SRLLEPSD 255  

                   ivegnpdPDeklvltllwqLirrfq<-*
                   +v     PD++ v+t+l q+  +f+   
    KIAA0903   256 MVLLAI-PDKLTVMTYLYQIRAHFS    279  

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