hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16150604/chunk_1/iprscan-20080502-16150604.nocrc
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Query sequence: KIAA0899
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
SM00809                                                 111.6    8.6e-29   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
SM00809           1/1     707   820 ..     1   124 []   111.6  8.6e-29

Alignments of top-scoring domains:
SM00809: domain 1 of 1, from 707 to 820: score 111.6, E = 8.6e-29
                   *->pklssappivayeknglqIgfkfekrrpgepdviritltftNksssp
                       ++++++++v++e+++lqIg+k+e +r+++   +r+ ++++Nk+s++
    KIAA0899   707    ARFVCKNNGVLFENQLLQIGLKSE-FRQNL---GRMFIFYGNKTSTQ 749  

                   itnFsfqaAVPK..sqkLqLqppss.ntlppggqggpPAitQvlkvenpg
                   + nF+ ++ + ++    L+Lq++++++t+++g+q     ++Qv+++e+++
    KIAA0899   750 FLNFTPTLICSDdlQPNLNLQTKPVdPTVEGGAQ-----VQQVVNIECVS 794  

                   kgkplrlrlrlsYtvggqsvqeqgdvlkfP<-*
                   + +++++ l +++++gg   + q+++ ++P   
    KIAA0899   795 D-FTEAPVLNIQFRYGG---TFQNVSVQLP    820  

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