hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-15334965/chunk_1/iprscan-20080502-15334965.nocrc
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Query sequence: KIAA0875
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR02097 yccV: hemimethylated DNA binding domain        193.9    1.2e-55   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR02097   1/1     493   590 ..     1   103 []   193.9  1.2e-55

Alignments of top-scoring domains:
TIGR02097: domain 1 of 1, from 493 to 590: score 193.9, E = 1.2e-55
                   *->aakFriGqvvRHklfgyrGVVidvDPeyanteewleaipveirprGk
                      +++++iG++++Hk++gy++V++++DP++++++ew+++++v+++p+G+
    KIAA0875   493    DVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGH 539  

                   dQPFYhVLvEddegeplyvaYvaEeNLlsdesdepiehPqvdelFdkfde
                   +QPFY+VLvEd++++     Y+a+eNL++++++++i+hP+v+++F++f++
    KIAA0875   540 HQPFYNVLVEDGSCR-----YAAQENLEYNVEPQEISHPDVGRYFSEFTG 584  

                   glykpk<-*
                   ++y+p+   
    KIAA0875   585 THYIPN    590  

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