hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-15165108/chunk_1/iprscan-20080502-15165108.nocrc
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Query sequence: KIAA0865
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00242                                                 553.3   9.8e-162   1
SM00248                                                 122.6    4.3e-32   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00248    1/5     134   163 ..     1    30 []    20.2     0.29
SM00248    2/5     167   196 ..     1    30 []    27.2   0.0023
SM00248    3/5     200   231 ..     1    30 []     7.1  5.2e+02
SM00248    4/5     263   292 ..     1    30 []    34.5  1.5e-05
SM00248    5/5     296   325 ..     1    30 []    33.7  2.6e-05
SM00242    1/1     440  1188 ..     1   771 []   553.3 9.8e-162

Alignments of top-scoring domains:
SM00248: domain 1 of 5, from 134 to 163: score 20.2, E = 0.29
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G + LHl+a+++n  ++++L+d+g+++n    
    KIAA0865   134    SGGSLLHLCARYDNAFIAEILIDRGVNVNH    163  

SM00248: domain 2 of 5, from 167 to 196: score 27.2, E = 0.0023
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      d +Tp+H+A++ +n+++v lL+ +ga++ +   
    KIAA0865   167    DFWTPMHIACACDNPDIVLLLVLAGANVLL    196  

SM00248: domain 3 of 5, from 200 to 231: score 7.1, E = 5.2e+02
                   *->dGrTpLHlAaen..gnlevvklLldkgadina<-*
                      +G+ pL +A+e ++ +  ++ +L ++g+d++    
    KIAA0865   200    NGNIPLDYAVEGteSSSILLTYLDENGVDLTS    231  

SM00248: domain 4 of 5, from 263 to 292: score 34.5, E = 1.5e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G T LH+A+++g++evv l+l++g+d+n+   
    KIAA0865   263    EGVTLLHMACASGYKEVVSLILEHGGDLNI    292  

SM00248: domain 5 of 5, from 296 to 325: score 33.7, E = 2.6e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      + +TpLHlAa++g+ ++vklLl + a++++   
    KIAA0865   296    QYWTPLHLAAKYGQTNLVKLLLMHQANPHL    325  

SM00242: domain 1 of 1, from 440 to 1188: score 553.3, E = 9.8e-162
                   *->rnppkfegVeDmvlLtyLnEpavlhNLkkRYlkdlIYTYiGlvLvav
                      + p+++   +D+++L+ Ln+ ++l+  +kR+ +++IYT+iG++L  v
    KIAA0865   440    MPPAPN---DDLATLSELNDGSLLYEIQKRFGNNQIYTFIGDILLLV 483  

                   NPYkqlppiYtdevikkYrekkdldGksrgElpPHvFAiADeAYrnMlre
                   NPYk+l piY+  v ++Y +    +Gk  + lpPH+F+  ++A+++++re
    KIAA0865   484 NPYKEL-PIYSSMVSQLYFSS---SGKLCSSLPPHLFSCVERAFHQLFRE 529  

                   keNQsIiISGESGAGKTEatKkimqYLAavsg.....svesvedqiLesN
                   ++ Q+ i SGE G+GK+Ea+K+i+++L+  +g ++ + +++ ++++    
    KIAA0865   530 QRPQCFILSGERGSGKSEASKQIIRHLTCRAGasratLDSRFKHVVC--- 576  

                   PiLEAFGNAKTvRNnNSSRFGKfieIhFdekG.kivGAkIenYLLEKSRV
                    iLEAFG AKT+ N+ SS F K++e++F e  + ++GA I++YLLEKSR 
    KIAA0865   577 -ILEAFGHAKTTLNDLSSCFIKYFELQFCERKqQLTGARIYTYLLEKSRL 625  

                   VsQakgERNYHIFYQLLaGaseelkkelgLskFSkspedYkYLnqggtpf
                   VsQ+ g  N+ IFY L+ G+s+e+k  l+L     ++   +YLnq     
    KIAA0865   626 VSQPLGQSNFLIFYLLMDGLSAEEKYGLHLN----NLCAHRYLNQ----- 666  

                   ankryssgcltvd.giD....DaeeFkeTdEvtlkAmrvlGfseeEqesI
                           ++++d +  +++   e  +     +++A++v+Gfs  E+e+ 
    KIAA0865   667 --------TIQDDaSTGerslNREKLAV----LKRALNVVGFSSLEVENL 704  

                   FrilAAILHLGNieFeegrntgdnaavtslkvadeeelqkaAeLLgvdpe
                   F ilAAILHLG i+F++ ++  +n+a     v+d + l+ +A +L+v+++
    KIAA0865   705 FVILAAILHLGDIRFTALNE--GNSAF----VSDLQLLEQVAGMLQVSTD 748  

                   eLekaLtkRkiktggeggsvitkplnveqAvyaRDALAKaiYsRLFdWLV
                   eL  aLt+ +   +g+    i++ ++ + A++ RD LAK +YsRLF++LV
    KIAA0865   749 ELASALTTDIQYFKGD---MIIRRHTIQIAEFFRDLLAKSLYSRLFSFLV 795  

                   krINksl.........sayfIGVLDIyGFEiFekNSFEQfCINyaNEKLQ
                   +  N+ l++++++++ +++ IG+LDI+GFE F+kN FEQ+C N +NEK+ 
    KIAA0865   796 NTMNSCLhsqdeqksmQTLDIGILDIFGFEEFQKNEFEQLCVNMTNEKMH 845  

                   QfFnqhvFKlEQEEYerEGIeWtfIdFfliDNQ.pciDLIEkKgkrPlGI
                    + n+  F  EQ E ++EG+  +   +    NQ+ ++D   +K   P G 
    KIAA0865   846 HYINEVLFLHEQVECVQEGVTME-TAYSA-GNQnGVLDFFFQK---PSGF 890  

                   lslLDEeClfHAqPkgTDqtFleKLnkalyhqhhkkhphfskprkS.lkk
                   l+lLDEe+ +     +  ++F  KL++ l     +++++ +    S+ k 
    KIAA0865   891 LTLLDEESQM---IWSVESNFPKKLQSLL----ESSNTNAVY---SpMKD 930  

                   .gkp.kkrfgrtaFiikHYAGdVtYnveGFLeKNkDtLfedlieLlqsSk
                   +  +   +++ taF+i HYAG+V Y+v G +eKNkD L+++l+ ++++S 
    KIAA0865   931 gNGNvALKDHGTAFTIMHYAGRVMYDVVGAIEKNKDSLSQNLLFVMKTSE 980  

                   npliasLFpeeadqsssaakekss.ggagksrkagr.r.epsk.......
                   n +i  LF++  +q++s  ++  s ++ g +++  ++  ++s+  +++++
    KIAA0865   981 NVVINHLFQSKLSQTGSLVSAYPSfKFRGHKSALLSkKmTASSiigenkn 1030 

                   ....................gtisskkrppTvGsqFk.sLneLmetLnst
                     + ++  +++++++  ++      ++ p T++sq ++sL + + +L ++
    KIAA0865  1031 ylelskllkkkgtstflqrlE----RGDPVTIASQLRkSLMDIIGKLQKC 1076 

                   nPHFIRCIKPNeeKkpgvFdaslVlhQLrylGvLEniRIRraGFPyRlpf
                   +PHFI CI+PN+ K+p +Fd+  V  QL+y GvLE ++I r G+P+Rl+f
    KIAA0865  1077 TPHFIHCIRPNNSKLPDTFDNFYVSAQLQYIGVLEMVKIFRYGYPVRLSF 1126 

                   deFlqRYkvLlpktwppwggewknrlfgdakkacealLqslglgiegdnl
                   ++Fl RYk  l++t  + ++e      ++a + c+++Lq+++        
    KIAA0865  1127 SDFLSRYK-PLADTFLREKKE------QSAAERCRLVLQQCK-------- 1161 

                   deeeyqiGkTKvFlRnpgqlaeLEelRee<-*
                     +++q+G  KvFl+ + +   L +l  +   
    KIAA0865  1162 -LQGWQMGVRKVFLK-YWHADQLNDLCLQ    1188 

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