hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-15165108/chunk_1/iprscan-20080502-15165108.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0865 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00063.11.fs Myosin head (motor domain) 469.6 3.6e-138 2 PF00063.11.ls Myosin head (motor domain) 468.1 1e-137 1 PF00023.20.ls Ankyrin repeat 144.4 2.8e-40 5 PF00023.20.fs Ankyrin repeat 136.7 6e-38 6 PF00612.17.fs IQ calmodulin-binding motif 21.6 2.2e-05 1 PF00612.17.ls IQ calmodulin-binding motif 23.6 0.00063 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00023.20.fs 1/6 134 166 .. 1 33 [] 26.2 2.5e-06 PF00023.20.ls 1/5 134 166 .. 1 33 [] 28.2 2.6e-05 PF00023.20.fs 2/6 167 199 .. 1 33 [] 31.5 8.6e-08 PF00023.20.ls 2/5 167 199 .. 1 33 [] 33.5 7e-07 PF00023.20.fs 3/6 200 234 .. 1 33 [] 0.3 41 PF00023.20.ls 3/5 200 234 .. 1 33 [] 2.3 13 PF00023.20.fs 4/6 247 262 .. 18 33 .] 2.2 12 PF00023.20.ls 4/5 263 295 .. 1 33 [] 41.9 2.1e-09 PF00023.20.fs 5/6 263 295 .. 1 33 [] 39.9 3.9e-10 PF00023.20.ls 5/5 296 328 .. 1 33 [] 38.5 2.1e-08 PF00023.20.fs 6/6 296 328 .. 1 33 [] 36.5 3.4e-09 PF00063.11.fs 1/2 445 866 .. 1 483 [. 320.3 3.8e-94 PF00063.11.ls 1/1 445 1175 .. 1 791 [] 468.1 1e-137 PF00063.11.fs 2/2 886 1175 .. 504 791 .] 149.3 4.9e-44 PF00612.17.ls 1/1 1190 1210 .. 1 21 [] 23.6 0.00063 PF00612.17.fs 1/1 1190 1210 .. 1 21 [] 21.6 2.2e-05 Alignments of top-scoring domains: PF00023.20.fs: domain 1 of 6, from 134 to 166: score 26.2, E = 2.5e-06 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* G + LHl a+++n+ +++ L+++G ++n+qd KIAA0865 134 SGGSLLHLCARYDNAFIAEILIDRGVNVNHQDE 166 PF00023.20.ls: domain 1 of 5, from 134 to 166: score 28.2, E = 2.6e-05 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* G + LHl a+++n+ +++ L+++G ++n+qd KIAA0865 134 SGGSLLHLCARYDNAFIAEILIDRGVNVNHQDE 166 PF00023.20.fs: domain 2 of 6, from 167 to 199: score 31.5, E = 8.6e-08 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* d +TP H+A+ ++n+++v lL+ +GA++ +qd KIAA0865 167 DFWTPMHIACACDNPDIVLLLVLAGANVLLQDV 199 PF00023.20.ls: domain 2 of 5, from 167 to 199: score 33.5, E = 7e-07 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* d +TP H+A+ ++n+++v lL+ +GA++ +qd KIAA0865 167 DFWTPMHIACACDNPDIVLLLVLAGANVLLQDV 199 PF00023.20.fs: domain 3 of 6, from 200 to 234: score 0.3, E = 41 *->dGfTPLHlAalrg..nlevvklLlsqGAdlnaqdd<-* +G+ PL +A++ +++ ++++L ++G dl KIAA0865 200 NGNIPLDYAVEGTesSSILLTYLDENGVDLTSLRQ 234 PF00023.20.ls: domain 3 of 5, from 200 to 234: score 2.3, E = 13 *->dGfTPLHlAalrg..nlevvklLlsqGAdlnaqdd<-* +G+ PL +A++ +++ ++++L ++G dl KIAA0865 200 NGNIPLDYAVEGTesSSILLTYLDENGVDLTSLRQ 234 PF00023.20.fs: domain 4 of 6, from 247 to 262: score 2.2, E = 12 *->vklLlsqGAdlnaqdd<-* vk +ls G ++n ++d KIAA0865 247 VKHFLSSGGNVNEKND 262 PF00023.20.ls: domain 4 of 5, from 263 to 295: score 41.9, E = 2.1e-09 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* +G T LH+A+ +g++evv+l l++G dln++dd KIAA0865 263 EGVTLLHMACASGYKEVVSLILEHGGDLNIVDD 295 PF00023.20.fs: domain 5 of 6, from 263 to 295: score 39.9, E = 3.9e-10 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* +G T LH+A+ +g++evv+l l++G dln++dd KIAA0865 263 EGVTLLHMACASGYKEVVSLILEHGGDLNIVDD 295 PF00023.20.ls: domain 5 of 5, from 296 to 328: score 38.5, E = 2.1e-08 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* +TPLHlAa++g++++vklLl + A++++++ KIAA0865 296 QYWTPLHLAAKYGQTNLVKLLLMHQANPHLVNC 328 PF00023.20.fs: domain 6 of 6, from 296 to 328: score 36.5, E = 3.4e-09 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* +TPLHlAa++g++++vklLl + A++++++ KIAA0865 296 QYWTPLHLAAKYGQTNLVKLLLMHQANPHLVNC 328 PF00063.11.fs: domain 1 of 2, from 445 to 866: score 320.3, E = 3.8e-94 *->veDlveLtylnEpsvLhNLkkRYtsgdlIYTYsGlvLvsvNPYkrLp +Dl+ L+ ln+ s+L+ ++kR+ + +IYT++G++L vNPYk+Lp KIAA0865 445 NDDLATLSELNDGSLLYEIQKRFG-NNQIYTFIGDILLLVNPYKELP 490 iYteeiikaY...rGkrrgElpPHiFAiAdeAYRsMlsdkeNQsIlisGE iY+ + + Y +++Gk + lpPH+F+ ++A ++ +++++Q+ ++sGE KIAA0865 491 IYSSMVSQLYfssSGKLCSSLPPHLFSCVERAFHQLFREQRPQCFILSGE 540 SGAGKTEntKkvmqYlAsvsgstpkvesaevtpnkeegsledqilqsNPi G GK+E++K ++++l+ +g ++ + +++++++ i KIAA0865 541 RGSGKSEASKQIIRHLTCRAGASR---------ATLDSRFKHVVC----I 577 LEAFGNAKTtRNNNSSRFGKfieIqFdatGsiNvTlvGgkIetYLLEKSR LEAFG AKTt N+ SS F K++e+qF + + l G++I tYLLEKSR KIAA0865 578 LEAFGHAKTTLNDLSSCFIKYFELQFCERKQQ---LTGARIYTYLLEKSR 624 VvyQtegERNFHIFYQLLagasaqeekkeLkLtspadpkdYaYLnqsgT. v Q+ g+ NF IFY L++g+sa+e k L+L + + +YLnq T KIAA0865 625 LVSQPLGQSNFLIFYLLMDGLSAEE-KYGLHLN---NLCAHRYLNQ--Ti 668 ....ynPcytvDdgiDDaeeFkdtrkAlkiiGftdeeqrsifrilAAILh +++ ++++ ++ + e ++ Al+++Gf++ e + +f ilAAILh KIAA0865 669 qddaSTGERSL-----NREKLAVLKRALNVVGFSSLEVENLFVILAAILH 713 LGNieGFkqdqatTGneeqAGvtvsedteeileiiaeLLGvDaeeLekaL LG i+ F + +++A ++d++ le +a++L+v+ eL+ aL KIAA0865 714 LGDIR-FTALN----EGNSA---FVSDLQL-LEQVAGMLQVSTDELASAL 754 lsrriktG.gggkRretvtkpqnveqAryaRDALAKaiYsRLFdWiVeki t + + ++ +++ + +++ A + RD LAK +YsRLF ++V+ KIAA0865 755 ------TTdIQYFKGDMIIRRHTIQIAEFFRDLLAKSLYSRLFSFLVNTM 798 NkaLsakeQasdSrGGqaaegdDTVSITVVdlPraaldktasf....IGv N L++++ ++ s+++ +IG+ KIAA0865 799 NSCLHSQD------------------------------EQKSMqtldIGI 818 LDIyGFEIFaekNSFEQLcINYvNEKLQQfFNhhmFklEQEEYkrEgIe< LDI+GFE F +kN FEQLc+N +NEK+ + N+ F EQ E ++Eg++ KIAA0865 819 LDIFGFEEF-QKNEFEQLCVNMTNEKMHHYINEVLFLHEQVECVQEGVT 866 -* KIAA0865 - - PF00063.11.ls: domain 1 of 1, from 445 to 1175: score 468.1, E = 1e-137 *->veDlveLtylnEpsvLhNLkkRYtsgdlIYTYsGlvLvsvNPYkrLp +Dl+ L+ ln+ s+L+ ++kR+ + +IYT++G++L vNPYk+Lp KIAA0865 445 NDDLATLSELNDGSLLYEIQKRFG-NNQIYTFIGDILLLVNPYKELP 490 iYteeiikaY...rGkrrgElpPHiFAiAdeAYRsMlsdkeNQsIlisGE iY+ + + Y +++Gk + lpPH+F+ ++A ++ +++++Q+ ++sGE KIAA0865 491 IYSSMVSQLYfssSGKLCSSLPPHLFSCVERAFHQLFREQRPQCFILSGE 540 SGAGKTEntKkvmqYlAsvsgstpkvesaevtpnkeegsledqilqsNPi G GK+E++K ++++l+ +g ++ + +++++++ i KIAA0865 541 RGSGKSEASKQIIRHLTCRAGASR---------ATLDSRFKHVVC----I 577 LEAFGNAKTtRNNNSSRFGKfieIqFdatGsiNvTlvGgkIetYLLEKSR LEAFG AKTt N+ SS F K++e+qF + + l G++I tYLLEKSR KIAA0865 578 LEAFGHAKTTLNDLSSCFIKYFELQFCERKQQ---LTGARIYTYLLEKSR 624 VvyQtegERNFHIFYQLLagasaqeekkeLkLtspadpkdYaYLnqsgT. v Q+ g+ NF IFY L++g+sa+e k L+L + + +YLnq T KIAA0865 625 LVSQPLGQSNFLIFYLLMDGLSAEE-KYGLHLN---NLCAHRYLNQ--Ti 668 ....ynPcytvDdgiDDaeeFkdtrkAlkiiGftdeeqrsifrilAAILh +++ ++++ ++ + e ++ Al+++Gf++ e + +f ilAAILh KIAA0865 669 qddaSTGERSL-----NREKLAVLKRALNVVGFSSLEVENLFVILAAILH 713 LGNieGFkqdqatTGneeqAGvtvsedteeileiiaeLLGvDaeeLekaL LG i+ F + +++A ++d++ le +a++L+v+ eL+ aL KIAA0865 714 LGDIR-FTALN----EGNSA---FVSDLQL-LEQVAGMLQVSTDELASAL 754 lsrriktG.gggkRretvtkpqnveqAryaRDALAKaiYsRLFdWiVeki t + + ++ +++ + +++ A + RD LAK +YsRLF ++V+ KIAA0865 755 ------TTdIQYFKGDMIIRRHTIQIAEFFRDLLAKSLYSRLFSFLVNTM 798 NkaLsakeQasdSrGGqaaegdDTVSITVVdlPraaldktasf....IGv N L++++ ++ s+++ +IG+ KIAA0865 799 NSCLHSQD------------------------------EQKSMqtldIGI 818 LDIyGFEIFaekNSFEQLcINYvNEKLQQfFNhhmFklEQEEYkrEgIeW LDI+GFE F +kN FEQLc+N +NEK+ + N+ F EQ E ++Eg++ KIAA0865 819 LDIFGFEEF-QKNEFEQLCVNMTNEKMHHYINEVLFLHEQVECVQEGVT- 866 tfIdyglDnqacidLIEkK..kPpGIlslLDEeCrfPkatDqtFldKLlq ++ y nq +++ +kP G l+lLDEe+ + + ++ F +KL + KIAA0865 867 METAYSAGNQN--GVLDFFfqKPSGFLTLLDEESQMIWSVESNFPKKLQS 914 tfsskhprlthFAqkpgrfkkgksrqgk.teFiikHYAGdVeYnaegfle + + ++ ++ + +++ + ++ +t+F+i HYAG+V+Y++ g +e KIAA0865 915 LL-ESSNTNAVYSPMK-DGNGNVALKDHgTAFTIMHYAGRVMYDVVGAIE 962 KNkDpLfddlisllksSsdepllaeLFpeeel................se KNkD L+++l+ ++k S + + LF++ l+++++ + ++ + + KIAA0865 963 KNKDSLSQNLLFVMKTSEN-VVINHLFQS-KLsqtgslvsaypsfkfrGH 1010 AaNltlkapdfeadfdeeeaaaksaklgsgkgksgkkknfle.....Tvg + l+ k +++ + e + +kl ++kg s+ +++ e++++ T + KIAA0865 1011 KSALLSKKMTASSIIGENKNYLELSKLLKKKGTSTFLQRL-ErgdpvTIA 1059 sqfkeslgeLmktLsstAnlnPHfvRCIKPNekKkagqFDaslVlhQlrc sq + sl + L ++ +PHf+ CI+PN+ K +++FD+ V Ql++ KIAA0865 1060 SQLRKSLMDIIGKLQKC---TPHFIHCIRPNNSKLPDTFDNFYVSAQLQY 1106 lGvLEigiRirraGFPnRitfdeFlqRYrlLapktwpsgfrpewvgdakk GvLE + i r G+P R+ f++Fl+RY+ La ++ r++ + +a + KIAA0865 1107 IGVLE-MVKIFRYGYPVRLSFSDFLSRYKPLADTFL----REKKEQSAAE 1151 gceliLqslrqtpgnlDkeeyrfGkTKiFfR<-* c+l+Lq+ +l +++G K+F++ KIAA0865 1152 RCRLVLQQC-----KL--QGWQMGVRKVFLK 1175 PF00063.11.fs: domain 2 of 2, from 886 to 1175: score 149.3, E = 4.9e-44 *->kPpGIlslLDEeCrfPkatDqtFldKLlqtfsskhprlthFAqkpgr kP G l+lLDEe+ + + ++ F +KL + + + ++ ++ + KIAA0865 886 KPSGFLTLLDEESQMIWSVESNFPKKLQSLL-ESSNTNAVYSPMK-D 930 fkkgksrqgk.teFiikHYAGdVeYnaegfleKNkDpLfddlisllksSs +++ + ++ +t+F+i HYAG+V+Y++ g +eKNkD L+++l+ ++k S KIAA0865 931 GNGNVALKDHgTAFTIMHYAGRVMYDVVGAIEKNKDSLSQNLLFVMKTSE 980 depllaeLFpeeel................seAaNltlkapdfeadfdee + + LF++ l+++++ + ++ + + + l+ k +++ + e KIAA0865 981 N-VVINHLFQS-KLsqtgslvsaypsfkfrGHKSALLSKKMTASSIIGEN 1028 eaaaksaklgsgkgksgkkknfle.....TvgsqfkeslgeLmktLsstA + +kl ++kg s+ +++ e++++ T +sq + sl + L ++ KIAA0865 1029 KNYLELSKLLKKKGTSTFLQRL-ErgdpvTIASQLRKSLMDIIGKLQKC- 1076 nlnPHfvRCIKPNekKkagqFDaslVlhQlrclGvLEigiRirraGFPnR +PHf+ CI+PN+ K +++FD+ V Ql++ GvLE + i r G+P R KIAA0865 1077 --TPHFIHCIRPNNSKLPDTFDNFYVSAQLQYIGVLE-MVKIFRYGYPVR 1123 itfdeFlqRYrlLapktwpsgfrpewvgdakkgceliLqslrqtpgnlDk + f++Fl+RY+ La ++ r++ + +a + c+l+Lq+ +l KIAA0865 1124 LSFSDFLSRYKPLADTFL----REKKEQSAAERCRLVLQQC-----KL-- 1162 eeyrfGkTKiFfR<-* +++G K+F++ KIAA0865 1163 QGWQMGVRKVFLK 1175 PF00612.17.ls: domain 1 of 1, from 1190 to 1210: score 23.6, E = 0.00063 *->rraaikIQaawRGylaRkryk<-* +r +i+ Q+++RG+laR+++ KIAA0865 1190 QRKIITCQKVIRGFLARQHLL 1210 PF00612.17.fs: domain 1 of 1, from 1190 to 1210: score 21.6, E = 2.2e-05 *->rraaikIQaawRGylaRkryk<-* +r +i+ Q+++RG+laR+++ KIAA0865 1190 QRKIITCQKVIRGFLARQHLL 1210 //