hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-15082882/chunk_1/iprscan-20080502-15082882.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0860
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00504                                                  69.7    3.6e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00504    1/1     272   341 ..     1    72 []    69.7  3.6e-16

Alignments of top-scoring domains:
SM00504: domain 1 of 1, from 272 to 341: score 69.7, E = 3.6e-16
                   *->eFiCPIslevMeDPVilpsGK..gqTyERraIekwlksgGrhgtcPv
                      eF++PI+le+M +P++lpsGK  +q    ++ +    +g+ ++++P+
    KIAA0860   272    EFLDPITLEIMPCPMLLPSGKviDQSTLEKCNRSEATWGR-VPSDPF 317  

                   TgqpLpthedLiPnKtglalKslIqew<-*
                   Tg   ++h++  P+   ++lK++I+++   
    KIAA0860   318 TGVAFTPHSQPLPH---PSLKARIDHF    341  

//