hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-15032749/chunk_1/iprscan-20080502-15032749.nocrc
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Query sequence: KIAA0857
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00168.20.fs C2 domain                                       51.9    7.1e-15   2
PF00168.20.ls C2 domain                                       44.3    3.8e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00168.20.fs   1/2     101   165 ..     1    68 [.    50.9  1.3e-14
PF00168.20.ls   1/1     101   208 ..     1    88 []    44.3  3.8e-10

Alignments of top-scoring domains:
PF00168.20.fs: domain 1 of 2, from 101 to 165: score 50.9, E = 1.3e-14
                   *->LrVtvieAknLppkDk.kngksDPYVkvylggdkkdqkkkTkvikkt
                      + Vtv++A++L+ k ++++++sD+Y ++++g      k+ T+v++kt
    KIAA0857   101    VQVTVLRARGLRGKSSgAGSTSDAYTVIQVGR----EKYSTSVVEKT 143  

                   .lNPvWNEtFtFevpppdlqetL<-*
                   + +P+W E++ Fe+pp  l+  L   
    KIAA0857   144 hGCPEWREECSFELPPGALDG-L    165  

PF00168.20.ls: domain 1 of 1, from 101 to 208: score 44.3, E = 3.8e-10
                   *->LrVtvieAknLppkDk.kngksDPYVkvylggdkkdqkkkTkvikkt
                      + Vtv++A++L+ k ++++++sD+Y ++++g      k+ T+v++kt
    KIAA0857   101    VQVTVLRARGLRGKSSgAGSTSDAYTVIQVGR----EKYSTSVVEKT 143  

                   .lNPvWNEtFtFevpppdlqetLeieVyDydrfgr...............
                   + +P+W E++ Fe  +p+++          d + r ++ + ++ +   ++
    KIAA0857   144 hGCPEWREECSFE--LPPGAL---------DGLLRaqeadagpapwaass 182  

                   ..................ddflGevs<-*
                       +   ++ +++  + d+flG+++   
    KIAA0857   183 aaacelvlttmhrsligvDKFLGQAT    208  

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